Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0280:0346
Extra
PDB:
ATOM 1 O3' C A 279 54.784 128.502 -1.776 1.00 83.69 O
ATOM 2 P G A 280 54.186 129.272 -0.498 1.00 83.09 P
ATOM 3 OP1 G A 280 53.254 130.320 -0.995 1.00 82.74 O
ATOM 4 OP2 G A 280 55.329 129.655 0.371 1.00 82.85 O
ATOM 5 O5' G A 280 53.326 128.164 0.258 1.00 83.51 O
ATOM 6 C5' G A 280 52.148 127.586 -0.348 1.00 83.75 C
ATOM 7 C4' G A 280 51.745 126.332 0.396 1.00 84.22 C
ATOM 8 O4' G A 280 52.795 125.336 0.256 1.00 84.27 O
ATOM 9 C3' G A 280 51.586 126.495 1.901 1.00 84.46 C
ATOM 10 O3' G A 280 50.312 127.023 2.261 1.00 86.20 O
ATOM 11 C2' G A 280 51.827 125.079 2.405 1.00 83.29 C
ATOM 12 O2' G A 280 50.717 124.225 2.222 1.00 81.93 O
ATOM 13 C1' G A 280 52.960 124.635 1.480 1.00 83.19 C
ATOM 14 N9 G A 280 54.273 124.975 2.023 1.00 82.58 N
ATOM 15 C8 G A 280 54.978 126.141 1.828 1.00 82.24 C
ATOM 16 N7 G A 280 56.123 126.159 2.452 1.00 81.89 N
ATOM 17 C5 G A 280 56.181 124.930 3.097 1.00 82.09 C
ATOM 18 C6 G A 280 57.188 124.374 3.932 1.00 81.79 C
ATOM 19 O6 G A 280 58.267 124.870 4.270 1.00 81.12 O
ATOM 20 N1 G A 280 56.836 123.104 4.381 1.00 80.77 N
ATOM 21 C2 G A 280 55.669 122.451 4.067 1.00 80.70 C
ATOM 22 N2 G A 280 55.509 121.238 4.599 1.00 80.40 N
ATOM 23 N3 G A 280 54.726 122.954 3.288 1.00 81.53 N
ATOM 24 C4 G A 280 55.045 124.188 2.842 1.00 82.25 C
ATOM 25 P A A 281 50.139 127.795 3.664 1.00 86.77 P
ATOM 26 OP1 A A 281 48.809 128.465 3.633 1.00 85.88 O
ATOM 27 OP2 A A 281 51.365 128.605 3.915 1.00 85.19 O
ATOM 28 O5' A A 281 50.097 126.611 4.731 1.00 85.33 O
TER
ATOM 1 O3' A B 345 56.104 124.622 12.429 1.00 86.51 O
ATOM 2 P G B 346 57.544 124.911 13.088 1.00 88.08 P
ATOM 3 OP1 G B 346 57.859 123.816 14.043 1.00 88.44 O
ATOM 4 OP2 G B 346 57.565 126.321 13.556 1.00 87.63 O
ATOM 5 O5' G B 346 58.547 124.777 11.858 1.00 89.03 O
ATOM 6 C5' G B 346 58.321 125.530 10.659 1.00 89.52 C
ATOM 7 C4' G B 346 57.794 124.629 9.568 1.00 90.08 C
ATOM 8 O4' G B 346 56.992 125.416 8.650 1.00 89.94 O
ATOM 9 C3' G B 346 58.830 123.911 8.710 1.00 90.27 C
ATOM 10 O3' G B 346 58.232 122.682 8.269 1.00 90.57 O
ATOM 11 C2' G B 346 59.006 124.903 7.560 1.00 90.14 C
ATOM 12 O2' G B 346 59.544 124.345 6.380 1.00 90.31 O
ATOM 13 C1' G B 346 57.560 125.359 7.360 1.00 89.47 C
ATOM 14 N9 G B 346 57.344 126.656 6.728 1.00 88.43 N
ATOM 15 C8 G B 346 58.212 127.719 6.639 1.00 88.18 C
ATOM 16 N7 G B 346 57.694 128.751 6.029 1.00 87.74 N
ATOM 17 C5 G B 346 56.411 128.342 5.692 1.00 88.05 C
ATOM 18 C6 G B 346 55.373 129.033 5.019 1.00 88.85 C
ATOM 19 O6 G B 346 55.375 130.188 4.574 1.00 89.94 O
ATOM 20 N1 G B 346 54.236 128.240 4.887 1.00 89.19 N
ATOM 21 C2 G B 346 54.111 126.950 5.347 1.00 88.57 C
ATOM 22 N2 G B 346 52.932 126.348 5.128 1.00 89.17 N
ATOM 23 N3 G B 346 55.070 126.299 5.976 1.00 87.65 N
ATOM 24 C4 G B 346 56.185 127.050 6.112 1.00 88.19 C
ATOM 25 P U B 347 59.113 121.571 7.503 1.00 90.50 P
ATOM 26 OP1 U B 347 60.452 121.453 8.148 1.00 90.24 O
ATOM 27 OP2 U B 347 59.018 121.857 6.048 1.00 90.61 O
ATOM 28 O5' U B 347 58.305 120.220 7.745 1.00 90.05 O
TER
ATOM 2 P G A 280 54.186 129.272 -0.498 1.00 83.09 P
ATOM 3 OP1 G A 280 53.254 130.320 -0.995 1.00 82.74 O
ATOM 4 OP2 G A 280 55.329 129.655 0.371 1.00 82.85 O
ATOM 5 O5' G A 280 53.326 128.164 0.258 1.00 83.51 O
ATOM 6 C5' G A 280 52.148 127.586 -0.348 1.00 83.75 C
ATOM 7 C4' G A 280 51.745 126.332 0.396 1.00 84.22 C
ATOM 8 O4' G A 280 52.795 125.336 0.256 1.00 84.27 O
ATOM 9 C3' G A 280 51.586 126.495 1.901 1.00 84.46 C
ATOM 10 O3' G A 280 50.312 127.023 2.261 1.00 86.20 O
ATOM 11 C2' G A 280 51.827 125.079 2.405 1.00 83.29 C
ATOM 12 O2' G A 280 50.717 124.225 2.222 1.00 81.93 O
ATOM 13 C1' G A 280 52.960 124.635 1.480 1.00 83.19 C
ATOM 14 N9 G A 280 54.273 124.975 2.023 1.00 82.58 N
ATOM 15 C8 G A 280 54.978 126.141 1.828 1.00 82.24 C
ATOM 16 N7 G A 280 56.123 126.159 2.452 1.00 81.89 N
ATOM 17 C5 G A 280 56.181 124.930 3.097 1.00 82.09 C
ATOM 18 C6 G A 280 57.188 124.374 3.932 1.00 81.79 C
ATOM 19 O6 G A 280 58.267 124.870 4.270 1.00 81.12 O
ATOM 20 N1 G A 280 56.836 123.104 4.381 1.00 80.77 N
ATOM 21 C2 G A 280 55.669 122.451 4.067 1.00 80.70 C
ATOM 22 N2 G A 280 55.509 121.238 4.599 1.00 80.40 N
ATOM 23 N3 G A 280 54.726 122.954 3.288 1.00 81.53 N
ATOM 24 C4 G A 280 55.045 124.188 2.842 1.00 82.25 C
ATOM 25 P A A 281 50.139 127.795 3.664 1.00 86.77 P
ATOM 26 OP1 A A 281 48.809 128.465 3.633 1.00 85.88 O
ATOM 27 OP2 A A 281 51.365 128.605 3.915 1.00 85.19 O
ATOM 28 O5' A A 281 50.097 126.611 4.731 1.00 85.33 O
TER
ATOM 1 O3' A B 345 56.104 124.622 12.429 1.00 86.51 O
ATOM 2 P G B 346 57.544 124.911 13.088 1.00 88.08 P
ATOM 3 OP1 G B 346 57.859 123.816 14.043 1.00 88.44 O
ATOM 4 OP2 G B 346 57.565 126.321 13.556 1.00 87.63 O
ATOM 5 O5' G B 346 58.547 124.777 11.858 1.00 89.03 O
ATOM 6 C5' G B 346 58.321 125.530 10.659 1.00 89.52 C
ATOM 7 C4' G B 346 57.794 124.629 9.568 1.00 90.08 C
ATOM 8 O4' G B 346 56.992 125.416 8.650 1.00 89.94 O
ATOM 9 C3' G B 346 58.830 123.911 8.710 1.00 90.27 C
ATOM 10 O3' G B 346 58.232 122.682 8.269 1.00 90.57 O
ATOM 11 C2' G B 346 59.006 124.903 7.560 1.00 90.14 C
ATOM 12 O2' G B 346 59.544 124.345 6.380 1.00 90.31 O
ATOM 13 C1' G B 346 57.560 125.359 7.360 1.00 89.47 C
ATOM 14 N9 G B 346 57.344 126.656 6.728 1.00 88.43 N
ATOM 15 C8 G B 346 58.212 127.719 6.639 1.00 88.18 C
ATOM 16 N7 G B 346 57.694 128.751 6.029 1.00 87.74 N
ATOM 17 C5 G B 346 56.411 128.342 5.692 1.00 88.05 C
ATOM 18 C6 G B 346 55.373 129.033 5.019 1.00 88.85 C
ATOM 19 O6 G B 346 55.375 130.188 4.574 1.00 89.94 O
ATOM 20 N1 G B 346 54.236 128.240 4.887 1.00 89.19 N
ATOM 21 C2 G B 346 54.111 126.950 5.347 1.00 88.57 C
ATOM 22 N2 G B 346 52.932 126.348 5.128 1.00 89.17 N
ATOM 23 N3 G B 346 55.070 126.299 5.976 1.00 87.65 N
ATOM 24 C4 G B 346 56.185 127.050 6.112 1.00 88.19 C
ATOM 25 P U B 347 59.113 121.571 7.503 1.00 90.50 P
ATOM 26 OP1 U B 347 60.452 121.453 8.148 1.00 90.24 O
ATOM 27 OP2 U B 347 59.018 121.857 6.048 1.00 90.61 O
ATOM 28 O5' U B 347 58.305 120.220 7.745 1.00 90.05 O
TER
Atoms:
OP1: (53.254,130.320,-0.995)
OP2: (55.329,129.655,0.371)
C3': (51.586,126.495,1.901)
C1': (52.960,124.635,1.480)
C5': (52.148,127.586,-0.348)
O6: (58.267,124.870,4.270)
O4': (52.795,125.336,0.256)
C8: (54.978,126.141,1.828)
C2: (55.669,122.451,4.067)
C6: (57.188,124.374,3.932)
C5: (56.181,124.930,3.097)
C4: (55.045,124.188,2.842)
P: (54.186,129.272,-0.498)
C4': (51.745,126.332,0.396)
C2': (51.827,125.079,2.405)
O2': (50.717,124.225,2.222)
N1: (56.836,123.104,4.381)
N2: (55.509,121.238,4.599)
N3: (54.726,122.954,3.288)
N7: (56.123,126.159,2.452)
N9: (54.273,124.975,2.023)
O5': (53.326,128.164,0.258)
O3': (50.312,127.023,2.261)
OP2: (55.329,129.655,0.371)
C3': (51.586,126.495,1.901)
C1': (52.960,124.635,1.480)
C5': (52.148,127.586,-0.348)
O6: (58.267,124.870,4.270)
O4': (52.795,125.336,0.256)
C8: (54.978,126.141,1.828)
C2: (55.669,122.451,4.067)
C6: (57.188,124.374,3.932)
C5: (56.181,124.930,3.097)
C4: (55.045,124.188,2.842)
P: (54.186,129.272,-0.498)
C4': (51.745,126.332,0.396)
C2': (51.827,125.079,2.405)
O2': (50.717,124.225,2.222)
N1: (56.836,123.104,4.381)
N2: (55.509,121.238,4.599)
N3: (54.726,122.954,3.288)
N7: (56.123,126.159,2.452)
N9: (54.273,124.975,2.023)
O5': (53.326,128.164,0.258)
O3': (50.312,127.023,2.261)
OP1: (57.859,123.816,14.043)
OP2: (57.565,126.321,13.556)
C3': (58.830,123.911,8.710)
C1': (57.560,125.359,7.360)
C5': (58.321,125.530,10.659)
O6: (55.375,130.188,4.574)
O4': (56.992,125.416,8.650)
C8: (58.212,127.719,6.639)
C2: (54.111,126.950,5.347)
C6: (55.373,129.033,5.019)
C5: (56.411,128.342,5.692)
C4: (56.185,127.050,6.112)
P: (57.544,124.911,13.088)
C4': (57.794,124.629,9.568)
C2': (59.006,124.903,7.560)
O2': (59.544,124.345,6.380)
N1: (54.236,128.240,4.887)
N2: (52.932,126.348,5.128)
N3: (55.070,126.299,5.976)
N7: (57.694,128.751,6.029)
N9: (57.344,126.656,6.728)
O5': (58.547,124.777,11.858)
O3': (58.232,122.682,8.269)
OP2: (57.565,126.321,13.556)
C3': (58.830,123.911,8.710)
C1': (57.560,125.359,7.360)
C5': (58.321,125.530,10.659)
O6: (55.375,130.188,4.574)
O4': (56.992,125.416,8.650)
C8: (58.212,127.719,6.639)
C2: (54.111,126.950,5.347)
C6: (55.373,129.033,5.019)
C5: (56.411,128.342,5.692)
C4: (56.185,127.050,6.112)
P: (57.544,124.911,13.088)
C4': (57.794,124.629,9.568)
C2': (59.006,124.903,7.560)
O2': (59.544,124.345,6.380)
N1: (54.236,128.240,4.887)
N2: (52.932,126.348,5.128)
N3: (55.070,126.299,5.976)
N7: (57.694,128.751,6.029)
N9: (57.344,126.656,6.728)
O5': (58.547,124.777,11.858)
O3': (58.232,122.682,8.269)
Image (generated by PyMOL):