Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0898:01251
Extra
PDB:
ATOM 1 O3' C A 897 29.965 89.315 80.674 1.00 29.73 O
ATOM 2 P G A 898 30.344 89.589 82.212 1.00 29.83 P
ATOM 3 OP1 G A 898 30.428 88.285 82.931 1.00 26.01 O
ATOM 4 OP2 G A 898 29.429 90.658 82.703 1.00 26.34 O
ATOM 5 O5' G A 898 31.801 90.227 82.163 1.00 30.52 O
ATOM 6 C5' G A 898 32.902 89.558 81.525 1.00 28.21 C
ATOM 7 C4' G A 898 34.061 90.522 81.370 1.00 30.72 C
ATOM 8 O4' G A 898 33.667 91.611 80.486 1.00 31.41 O
ATOM 9 C3' G A 898 34.506 91.236 82.641 1.00 28.48 C
ATOM 10 O3' G A 898 35.370 90.430 83.442 1.00 25.94 O
ATOM 11 C2' G A 898 35.185 92.477 82.081 1.00 27.92 C
ATOM 12 O2' G A 898 36.442 92.196 81.501 1.00 31.89 O
ATOM 13 C1' G A 898 34.239 92.830 80.941 1.00 29.21 C
ATOM 14 N9 G A 898 33.160 93.713 81.372 1.00 28.39 N
ATOM 15 C8 G A 898 31.852 93.367 81.603 1.00 27.81 C
ATOM 16 N7 G A 898 31.115 94.376 81.980 1.00 28.85 N
ATOM 17 C5 G A 898 31.987 95.452 81.998 1.00 28.41 C
ATOM 18 C6 G A 898 31.755 96.803 82.315 1.00 28.48 C
ATOM 19 O6 G A 898 30.700 97.339 82.650 1.00 30.56 O
ATOM 20 N1 G A 898 32.914 97.563 82.206 1.00 26.89 N
ATOM 21 C2 G A 898 34.140 97.080 81.833 1.00 26.76 C
ATOM 22 N2 G A 898 35.138 97.977 81.782 1.00 25.86 N
ATOM 23 N3 G A 898 34.370 95.813 81.529 1.00 27.50 N
ATOM 24 C4 G A 898 33.255 95.061 81.630 1.00 28.56 C
ATOM 25 P A A 899 35.639 90.833 84.975 1.00 28.50 P
ATOM 26 OP1 A A 899 36.120 89.614 85.668 1.00 23.83 O
ATOM 27 OP2 A A 899 34.468 91.575 85.515 1.00 24.85 O
ATOM 28 O5' A A 899 36.839 91.881 84.883 1.00 29.10 O
TER
ATOM 1 O3' A B1250 26.649 99.947 86.583 1.00 33.59 O
ATOM 2 P G B1251 27.333 99.915 85.137 1.00 32.74 P
ATOM 3 OP1 G B1251 26.977 101.193 84.468 1.00 34.54 O
ATOM 4 OP2 G B1251 27.006 98.625 84.494 1.00 35.63 O
ATOM 5 O5' G B1251 28.898 99.897 85.411 1.00 33.10 O
ATOM 6 C5' G B1251 29.567 101.018 86.009 1.00 29.47 C
ATOM 7 C4' G B1251 31.014 100.676 86.243 1.00 30.07 C
ATOM 8 O4' G B1251 31.084 99.470 87.048 1.00 28.01 O
ATOM 9 C3' G B1251 31.834 100.359 84.998 1.00 29.14 C
ATOM 10 O3' G B1251 32.319 101.578 84.423 1.00 29.08 O
ATOM 11 C2' G B1251 32.932 99.467 85.564 1.00 29.14 C
ATOM 12 O2' G B1251 33.895 100.217 86.286 1.00 30.66 O
ATOM 13 C1' G B1251 32.144 98.650 86.587 1.00 28.95 C
ATOM 14 N9 G B1251 31.564 97.398 86.104 1.00 29.70 N
ATOM 15 C8 G B1251 30.229 97.150 85.879 1.00 31.17 C
ATOM 16 N7 G B1251 29.988 95.914 85.542 1.00 30.79 N
ATOM 17 C5 G B1251 31.237 95.312 85.521 1.00 28.55 C
ATOM 18 C6 G B1251 31.594 93.978 85.253 1.00 28.67 C
ATOM 19 O6 G B1251 30.858 93.025 84.991 1.00 30.78 O
ATOM 20 N1 G B1251 32.966 93.791 85.330 1.00 29.86 N
ATOM 21 C2 G B1251 33.877 94.762 85.642 1.00 30.89 C
ATOM 22 N2 G B1251 35.162 94.376 85.671 1.00 29.28 N
ATOM 23 N3 G B1251 33.554 96.016 85.909 1.00 29.87 N
ATOM 24 C4 G B1251 32.224 96.218 85.836 1.00 28.36 C
ATOM 25 P U B1252 33.323 101.550 83.158 1.00 29.41 P
ATOM 26 OP1 U B1252 32.995 102.767 82.367 1.00 26.89 O
ATOM 27 OP2 U B1252 33.304 100.221 82.499 1.00 27.24 O
ATOM 28 O5' U B1252 34.768 101.734 83.808 1.00 28.25 O
TER
ATOM 2 P G A 898 30.344 89.589 82.212 1.00 29.83 P
ATOM 3 OP1 G A 898 30.428 88.285 82.931 1.00 26.01 O
ATOM 4 OP2 G A 898 29.429 90.658 82.703 1.00 26.34 O
ATOM 5 O5' G A 898 31.801 90.227 82.163 1.00 30.52 O
ATOM 6 C5' G A 898 32.902 89.558 81.525 1.00 28.21 C
ATOM 7 C4' G A 898 34.061 90.522 81.370 1.00 30.72 C
ATOM 8 O4' G A 898 33.667 91.611 80.486 1.00 31.41 O
ATOM 9 C3' G A 898 34.506 91.236 82.641 1.00 28.48 C
ATOM 10 O3' G A 898 35.370 90.430 83.442 1.00 25.94 O
ATOM 11 C2' G A 898 35.185 92.477 82.081 1.00 27.92 C
ATOM 12 O2' G A 898 36.442 92.196 81.501 1.00 31.89 O
ATOM 13 C1' G A 898 34.239 92.830 80.941 1.00 29.21 C
ATOM 14 N9 G A 898 33.160 93.713 81.372 1.00 28.39 N
ATOM 15 C8 G A 898 31.852 93.367 81.603 1.00 27.81 C
ATOM 16 N7 G A 898 31.115 94.376 81.980 1.00 28.85 N
ATOM 17 C5 G A 898 31.987 95.452 81.998 1.00 28.41 C
ATOM 18 C6 G A 898 31.755 96.803 82.315 1.00 28.48 C
ATOM 19 O6 G A 898 30.700 97.339 82.650 1.00 30.56 O
ATOM 20 N1 G A 898 32.914 97.563 82.206 1.00 26.89 N
ATOM 21 C2 G A 898 34.140 97.080 81.833 1.00 26.76 C
ATOM 22 N2 G A 898 35.138 97.977 81.782 1.00 25.86 N
ATOM 23 N3 G A 898 34.370 95.813 81.529 1.00 27.50 N
ATOM 24 C4 G A 898 33.255 95.061 81.630 1.00 28.56 C
ATOM 25 P A A 899 35.639 90.833 84.975 1.00 28.50 P
ATOM 26 OP1 A A 899 36.120 89.614 85.668 1.00 23.83 O
ATOM 27 OP2 A A 899 34.468 91.575 85.515 1.00 24.85 O
ATOM 28 O5' A A 899 36.839 91.881 84.883 1.00 29.10 O
TER
ATOM 1 O3' A B1250 26.649 99.947 86.583 1.00 33.59 O
ATOM 2 P G B1251 27.333 99.915 85.137 1.00 32.74 P
ATOM 3 OP1 G B1251 26.977 101.193 84.468 1.00 34.54 O
ATOM 4 OP2 G B1251 27.006 98.625 84.494 1.00 35.63 O
ATOM 5 O5' G B1251 28.898 99.897 85.411 1.00 33.10 O
ATOM 6 C5' G B1251 29.567 101.018 86.009 1.00 29.47 C
ATOM 7 C4' G B1251 31.014 100.676 86.243 1.00 30.07 C
ATOM 8 O4' G B1251 31.084 99.470 87.048 1.00 28.01 O
ATOM 9 C3' G B1251 31.834 100.359 84.998 1.00 29.14 C
ATOM 10 O3' G B1251 32.319 101.578 84.423 1.00 29.08 O
ATOM 11 C2' G B1251 32.932 99.467 85.564 1.00 29.14 C
ATOM 12 O2' G B1251 33.895 100.217 86.286 1.00 30.66 O
ATOM 13 C1' G B1251 32.144 98.650 86.587 1.00 28.95 C
ATOM 14 N9 G B1251 31.564 97.398 86.104 1.00 29.70 N
ATOM 15 C8 G B1251 30.229 97.150 85.879 1.00 31.17 C
ATOM 16 N7 G B1251 29.988 95.914 85.542 1.00 30.79 N
ATOM 17 C5 G B1251 31.237 95.312 85.521 1.00 28.55 C
ATOM 18 C6 G B1251 31.594 93.978 85.253 1.00 28.67 C
ATOM 19 O6 G B1251 30.858 93.025 84.991 1.00 30.78 O
ATOM 20 N1 G B1251 32.966 93.791 85.330 1.00 29.86 N
ATOM 21 C2 G B1251 33.877 94.762 85.642 1.00 30.89 C
ATOM 22 N2 G B1251 35.162 94.376 85.671 1.00 29.28 N
ATOM 23 N3 G B1251 33.554 96.016 85.909 1.00 29.87 N
ATOM 24 C4 G B1251 32.224 96.218 85.836 1.00 28.36 C
ATOM 25 P U B1252 33.323 101.550 83.158 1.00 29.41 P
ATOM 26 OP1 U B1252 32.995 102.767 82.367 1.00 26.89 O
ATOM 27 OP2 U B1252 33.304 100.221 82.499 1.00 27.24 O
ATOM 28 O5' U B1252 34.768 101.734 83.808 1.00 28.25 O
TER
Atoms:
OP1: (30.428,88.285,82.931)
OP2: (29.429,90.658,82.703)
C3': (34.506,91.236,82.641)
C1': (34.239,92.830,80.941)
C5': (32.902,89.558,81.525)
O6: (30.700,97.339,82.650)
O4': (33.667,91.611,80.486)
C8: (31.852,93.367,81.603)
C2: (34.140,97.080,81.833)
C6: (31.755,96.803,82.315)
C5: (31.987,95.452,81.998)
C4: (33.255,95.061,81.630)
P: (30.344,89.589,82.212)
C4': (34.061,90.522,81.370)
C2': (35.185,92.477,82.081)
O2': (36.442,92.196,81.501)
N1: (32.914,97.563,82.206)
N2: (35.138,97.977,81.782)
N3: (34.370,95.813,81.529)
N7: (31.115,94.376,81.980)
N9: (33.160,93.713,81.372)
O5': (31.801,90.227,82.163)
O3': (35.370,90.430,83.442)
OP2: (29.429,90.658,82.703)
C3': (34.506,91.236,82.641)
C1': (34.239,92.830,80.941)
C5': (32.902,89.558,81.525)
O6: (30.700,97.339,82.650)
O4': (33.667,91.611,80.486)
C8: (31.852,93.367,81.603)
C2: (34.140,97.080,81.833)
C6: (31.755,96.803,82.315)
C5: (31.987,95.452,81.998)
C4: (33.255,95.061,81.630)
P: (30.344,89.589,82.212)
C4': (34.061,90.522,81.370)
C2': (35.185,92.477,82.081)
O2': (36.442,92.196,81.501)
N1: (32.914,97.563,82.206)
N2: (35.138,97.977,81.782)
N3: (34.370,95.813,81.529)
N7: (31.115,94.376,81.980)
N9: (33.160,93.713,81.372)
O5': (31.801,90.227,82.163)
O3': (35.370,90.430,83.442)
OP1: (26.977,101.193,84.468)
OP2: (27.006,98.625,84.494)
C3': (31.834,100.359,84.998)
C1': (32.144,98.650,86.587)
C5': (29.567,101.018,86.009)
O6: (30.858,93.025,84.991)
O4': (31.084,99.470,87.048)
C8: (30.229,97.150,85.879)
C2: (33.877,94.762,85.642)
C6: (31.594,93.978,85.253)
C5: (31.237,95.312,85.521)
C4: (32.224,96.218,85.836)
P: (27.333,99.915,85.137)
C4': (31.014,100.676,86.243)
C2': (32.932,99.467,85.564)
O2': (33.895,100.217,86.286)
N1: (32.966,93.791,85.330)
N2: (35.162,94.376,85.671)
N3: (33.554,96.016,85.909)
N7: (29.988,95.914,85.542)
N9: (31.564,97.398,86.104)
O5': (28.898,99.897,85.411)
O3': (32.319,101.578,84.423)
OP2: (27.006,98.625,84.494)
C3': (31.834,100.359,84.998)
C1': (32.144,98.650,86.587)
C5': (29.567,101.018,86.009)
O6: (30.858,93.025,84.991)
O4': (31.084,99.470,87.048)
C8: (30.229,97.150,85.879)
C2: (33.877,94.762,85.642)
C6: (31.594,93.978,85.253)
C5: (31.237,95.312,85.521)
C4: (32.224,96.218,85.836)
P: (27.333,99.915,85.137)
C4': (31.014,100.676,86.243)
C2': (32.932,99.467,85.564)
O2': (33.895,100.217,86.286)
N1: (32.966,93.791,85.330)
N2: (35.162,94.376,85.671)
N3: (33.554,96.016,85.909)
N7: (29.988,95.914,85.542)
N9: (31.564,97.398,86.104)
O5': (28.898,99.897,85.411)
O3': (32.319,101.578,84.423)
Image (generated by PyMOL):