Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:977:9101
Extra
PDB:
ATOM 1 O3' A A 76 39.349 62.170 125.364 1.00 59.62 O
ATOM 2 P G A 77 37.934 61.715 125.953 1.00 60.11 P
ATOM 3 OP1 G A 77 37.688 62.577 127.139 1.00 57.38 O
ATOM 4 OP2 G A 77 37.940 60.232 126.105 1.00 59.87 O
ATOM 5 O5' G A 77 36.916 62.094 124.786 1.00 57.78 O
ATOM 6 C5' G A 77 36.670 63.472 124.433 1.00 54.57 C
ATOM 7 C4' G A 77 37.750 63.976 123.497 1.00 52.85 C
ATOM 8 O4' G A 77 37.801 63.160 122.285 1.00 50.97 O
ATOM 9 C3' G A 77 37.591 65.417 123.014 1.00 50.81 C
ATOM 10 O3' G A 77 38.907 65.957 122.854 1.00 49.84 O
ATOM 11 C2' G A 77 36.913 65.224 121.663 1.00 49.07 C
ATOM 12 O2' G A 77 37.042 66.323 120.793 1.00 50.37 O
ATOM 13 C1' G A 77 37.674 64.004 121.156 1.00 48.72 C
ATOM 14 N9 G A 77 37.084 63.252 120.050 1.00 47.43 N
ATOM 15 C8 G A 77 35.750 63.059 119.768 1.00 45.17 C
ATOM 16 N7 G A 77 35.554 62.325 118.706 1.00 44.38 N
ATOM 17 C5 G A 77 36.834 62.013 118.259 1.00 44.55 C
ATOM 18 C6 G A 77 37.260 61.234 117.148 1.00 44.03 C
ATOM 19 O6 G A 77 36.570 60.646 116.307 1.00 43.49 O
ATOM 20 N1 G A 77 38.649 61.175 117.067 1.00 44.64 N
ATOM 21 C2 G A 77 39.520 61.790 117.934 1.00 46.05 C
ATOM 22 N2 G A 77 40.834 61.607 117.688 1.00 46.14 N
ATOM 23 N3 G A 77 39.136 62.525 118.966 1.00 44.50 N
ATOM 24 C4 G A 77 37.789 62.586 119.071 1.00 45.64 C
ATOM 25 P U A 78 39.113 67.486 122.402 1.00 49.80 P
ATOM 26 OP1 U A 78 38.081 68.346 123.046 1.00 47.75 O
ATOM 27 OP2 U A 78 39.258 67.496 120.921 1.00 47.77 O
ATOM 28 O5' U A 78 40.530 67.856 123.024 1.00 48.87 O
TER
ATOM 1 O3' G B 100 37.007 62.910 110.380 1.00 42.97 O
ATOM 2 P G B 101 37.288 61.668 111.355 1.00 43.61 P
ATOM 3 OP1 G B 101 37.610 60.504 110.486 1.00 43.18 O
ATOM 4 OP2 G B 101 36.174 61.577 112.333 1.00 43.54 O
ATOM 5 O5' G B 101 38.598 62.093 112.151 1.00 41.45 O
ATOM 6 C5' G B 101 39.875 62.122 111.496 1.00 41.27 C
ATOM 7 C4' G B 101 40.921 62.678 112.423 1.00 40.90 C
ATOM 8 O4' G B 101 40.571 64.041 112.792 1.00 42.33 O
ATOM 9 C3' G B 101 41.032 61.980 113.760 1.00 40.24 C
ATOM 10 O3' G B 101 41.772 60.778 113.683 1.00 40.46 O
ATOM 11 C2' G B 101 41.708 63.043 114.607 1.00 40.99 C
ATOM 12 O2' G B 101 43.082 63.174 114.300 1.00 39.96 O
ATOM 13 C1' G B 101 40.968 64.291 114.133 1.00 41.01 C
ATOM 14 N9 G B 101 39.769 64.554 114.927 1.00 41.63 N
ATOM 15 C8 G B 101 38.466 64.294 114.574 1.00 40.70 C
ATOM 16 N7 G B 101 37.608 64.645 115.492 1.00 40.47 N
ATOM 17 C5 G B 101 38.389 65.167 116.513 1.00 40.59 C
ATOM 18 C6 G B 101 38.015 65.709 117.769 1.00 41.23 C
ATOM 19 O6 G B 101 36.876 65.848 118.241 1.00 40.60 O
ATOM 20 N1 G B 101 39.126 66.116 118.503 1.00 39.37 N
ATOM 21 C2 G B 101 40.426 66.016 118.082 1.00 40.03 C
ATOM 22 N2 G B 101 41.360 66.461 118.933 1.00 39.37 N
ATOM 23 N3 G B 101 40.787 65.517 116.913 1.00 41.28 N
ATOM 24 C4 G B 101 39.724 65.114 116.184 1.00 40.91 C
ATOM 25 P A B 102 41.629 59.693 114.858 1.00 39.37 P
ATOM 26 OP1 A B 102 42.242 58.431 114.368 1.00 33.61 O
ATOM 27 OP2 A B 102 40.212 59.701 115.314 1.00 39.40 O
ATOM 28 O5' A B 102 42.514 60.296 116.035 1.00 36.54 O
TER
ATOM 2 P G A 77 37.934 61.715 125.953 1.00 60.11 P
ATOM 3 OP1 G A 77 37.688 62.577 127.139 1.00 57.38 O
ATOM 4 OP2 G A 77 37.940 60.232 126.105 1.00 59.87 O
ATOM 5 O5' G A 77 36.916 62.094 124.786 1.00 57.78 O
ATOM 6 C5' G A 77 36.670 63.472 124.433 1.00 54.57 C
ATOM 7 C4' G A 77 37.750 63.976 123.497 1.00 52.85 C
ATOM 8 O4' G A 77 37.801 63.160 122.285 1.00 50.97 O
ATOM 9 C3' G A 77 37.591 65.417 123.014 1.00 50.81 C
ATOM 10 O3' G A 77 38.907 65.957 122.854 1.00 49.84 O
ATOM 11 C2' G A 77 36.913 65.224 121.663 1.00 49.07 C
ATOM 12 O2' G A 77 37.042 66.323 120.793 1.00 50.37 O
ATOM 13 C1' G A 77 37.674 64.004 121.156 1.00 48.72 C
ATOM 14 N9 G A 77 37.084 63.252 120.050 1.00 47.43 N
ATOM 15 C8 G A 77 35.750 63.059 119.768 1.00 45.17 C
ATOM 16 N7 G A 77 35.554 62.325 118.706 1.00 44.38 N
ATOM 17 C5 G A 77 36.834 62.013 118.259 1.00 44.55 C
ATOM 18 C6 G A 77 37.260 61.234 117.148 1.00 44.03 C
ATOM 19 O6 G A 77 36.570 60.646 116.307 1.00 43.49 O
ATOM 20 N1 G A 77 38.649 61.175 117.067 1.00 44.64 N
ATOM 21 C2 G A 77 39.520 61.790 117.934 1.00 46.05 C
ATOM 22 N2 G A 77 40.834 61.607 117.688 1.00 46.14 N
ATOM 23 N3 G A 77 39.136 62.525 118.966 1.00 44.50 N
ATOM 24 C4 G A 77 37.789 62.586 119.071 1.00 45.64 C
ATOM 25 P U A 78 39.113 67.486 122.402 1.00 49.80 P
ATOM 26 OP1 U A 78 38.081 68.346 123.046 1.00 47.75 O
ATOM 27 OP2 U A 78 39.258 67.496 120.921 1.00 47.77 O
ATOM 28 O5' U A 78 40.530 67.856 123.024 1.00 48.87 O
TER
ATOM 1 O3' G B 100 37.007 62.910 110.380 1.00 42.97 O
ATOM 2 P G B 101 37.288 61.668 111.355 1.00 43.61 P
ATOM 3 OP1 G B 101 37.610 60.504 110.486 1.00 43.18 O
ATOM 4 OP2 G B 101 36.174 61.577 112.333 1.00 43.54 O
ATOM 5 O5' G B 101 38.598 62.093 112.151 1.00 41.45 O
ATOM 6 C5' G B 101 39.875 62.122 111.496 1.00 41.27 C
ATOM 7 C4' G B 101 40.921 62.678 112.423 1.00 40.90 C
ATOM 8 O4' G B 101 40.571 64.041 112.792 1.00 42.33 O
ATOM 9 C3' G B 101 41.032 61.980 113.760 1.00 40.24 C
ATOM 10 O3' G B 101 41.772 60.778 113.683 1.00 40.46 O
ATOM 11 C2' G B 101 41.708 63.043 114.607 1.00 40.99 C
ATOM 12 O2' G B 101 43.082 63.174 114.300 1.00 39.96 O
ATOM 13 C1' G B 101 40.968 64.291 114.133 1.00 41.01 C
ATOM 14 N9 G B 101 39.769 64.554 114.927 1.00 41.63 N
ATOM 15 C8 G B 101 38.466 64.294 114.574 1.00 40.70 C
ATOM 16 N7 G B 101 37.608 64.645 115.492 1.00 40.47 N
ATOM 17 C5 G B 101 38.389 65.167 116.513 1.00 40.59 C
ATOM 18 C6 G B 101 38.015 65.709 117.769 1.00 41.23 C
ATOM 19 O6 G B 101 36.876 65.848 118.241 1.00 40.60 O
ATOM 20 N1 G B 101 39.126 66.116 118.503 1.00 39.37 N
ATOM 21 C2 G B 101 40.426 66.016 118.082 1.00 40.03 C
ATOM 22 N2 G B 101 41.360 66.461 118.933 1.00 39.37 N
ATOM 23 N3 G B 101 40.787 65.517 116.913 1.00 41.28 N
ATOM 24 C4 G B 101 39.724 65.114 116.184 1.00 40.91 C
ATOM 25 P A B 102 41.629 59.693 114.858 1.00 39.37 P
ATOM 26 OP1 A B 102 42.242 58.431 114.368 1.00 33.61 O
ATOM 27 OP2 A B 102 40.212 59.701 115.314 1.00 39.40 O
ATOM 28 O5' A B 102 42.514 60.296 116.035 1.00 36.54 O
TER
Atoms:
OP1: (37.688,62.577,127.139)
OP2: (37.940,60.232,126.105)
C3': (37.591,65.417,123.014)
C1': (37.674,64.004,121.156)
C5': (36.670,63.472,124.433)
O6: (36.570,60.646,116.307)
O4': (37.801,63.160,122.285)
C8: (35.750,63.059,119.768)
C2: (39.520,61.790,117.934)
C6: (37.260,61.234,117.148)
C5: (36.834,62.013,118.259)
C4: (37.789,62.586,119.071)
P: (37.934,61.715,125.953)
C4': (37.750,63.976,123.497)
C2': (36.913,65.224,121.663)
O2': (37.042,66.323,120.793)
N1: (38.649,61.175,117.067)
N2: (40.834,61.607,117.688)
N3: (39.136,62.525,118.966)
N7: (35.554,62.325,118.706)
N9: (37.084,63.252,120.050)
O5': (36.916,62.094,124.786)
O3': (38.907,65.957,122.854)
OP2: (37.940,60.232,126.105)
C3': (37.591,65.417,123.014)
C1': (37.674,64.004,121.156)
C5': (36.670,63.472,124.433)
O6: (36.570,60.646,116.307)
O4': (37.801,63.160,122.285)
C8: (35.750,63.059,119.768)
C2: (39.520,61.790,117.934)
C6: (37.260,61.234,117.148)
C5: (36.834,62.013,118.259)
C4: (37.789,62.586,119.071)
P: (37.934,61.715,125.953)
C4': (37.750,63.976,123.497)
C2': (36.913,65.224,121.663)
O2': (37.042,66.323,120.793)
N1: (38.649,61.175,117.067)
N2: (40.834,61.607,117.688)
N3: (39.136,62.525,118.966)
N7: (35.554,62.325,118.706)
N9: (37.084,63.252,120.050)
O5': (36.916,62.094,124.786)
O3': (38.907,65.957,122.854)
OP1: (37.610,60.504,110.486)
OP2: (36.174,61.577,112.333)
C3': (41.032,61.980,113.760)
C1': (40.968,64.291,114.133)
C5': (39.875,62.122,111.496)
O6: (36.876,65.848,118.241)
O4': (40.571,64.041,112.792)
C8: (38.466,64.294,114.574)
C2: (40.426,66.016,118.082)
C6: (38.015,65.709,117.769)
C5: (38.389,65.167,116.513)
C4: (39.724,65.114,116.184)
P: (37.288,61.668,111.355)
C4': (40.921,62.678,112.423)
C2': (41.708,63.043,114.607)
O2': (43.082,63.174,114.300)
N1: (39.126,66.116,118.503)
N2: (41.360,66.461,118.933)
N3: (40.787,65.517,116.913)
N7: (37.608,64.645,115.492)
N9: (39.769,64.554,114.927)
O5': (38.598,62.093,112.151)
O3': (41.772,60.778,113.683)
OP2: (36.174,61.577,112.333)
C3': (41.032,61.980,113.760)
C1': (40.968,64.291,114.133)
C5': (39.875,62.122,111.496)
O6: (36.876,65.848,118.241)
O4': (40.571,64.041,112.792)
C8: (38.466,64.294,114.574)
C2: (40.426,66.016,118.082)
C6: (38.015,65.709,117.769)
C5: (38.389,65.167,116.513)
C4: (39.724,65.114,116.184)
P: (37.288,61.668,111.355)
C4': (40.921,62.678,112.423)
C2': (41.708,63.043,114.607)
O2': (43.082,63.174,114.300)
N1: (39.126,66.116,118.503)
N2: (41.360,66.461,118.933)
N3: (40.787,65.517,116.913)
N7: (37.608,64.645,115.492)
N9: (39.769,64.554,114.927)
O5': (38.598,62.093,112.151)
O3': (41.772,60.778,113.683)
Image (generated by PyMOL):