Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0898:01251
Extra
PDB:
ATOM 1 O3' C A 897 30.077 89.197 80.566 1.00 28.96 O
ATOM 2 P G A 898 30.452 89.455 82.109 1.00 31.30 P
ATOM 3 OP1 G A 898 30.589 88.148 82.811 1.00 28.72 O
ATOM 4 OP2 G A 898 29.503 90.475 82.628 1.00 28.89 O
ATOM 5 O5' G A 898 31.895 90.122 82.053 1.00 31.77 O
ATOM 6 C5' G A 898 33.015 89.443 81.447 1.00 30.65 C
ATOM 7 C4' G A 898 34.175 90.403 81.284 1.00 30.60 C
ATOM 8 O4' G A 898 33.767 91.497 80.420 1.00 31.58 O
ATOM 9 C3' G A 898 34.637 91.106 82.553 1.00 28.99 C
ATOM 10 O3' G A 898 35.515 90.305 83.332 1.00 26.15 O
ATOM 11 C2' G A 898 35.312 92.346 81.996 1.00 28.34 C
ATOM 12 O2' G A 898 36.562 92.052 81.409 1.00 32.63 O
ATOM 13 C1' G A 898 34.350 92.712 80.873 1.00 29.30 C
ATOM 14 N9 G A 898 33.277 93.587 81.332 1.00 28.15 N
ATOM 15 C8 G A 898 31.984 93.227 81.606 1.00 28.20 C
ATOM 16 N7 G A 898 31.247 94.227 82.001 1.00 29.20 N
ATOM 17 C5 G A 898 32.105 95.314 81.984 1.00 27.42 C
ATOM 18 C6 G A 898 31.867 96.664 82.305 1.00 26.56 C
ATOM 19 O6 G A 898 30.817 97.194 82.668 1.00 28.76 O
ATOM 20 N1 G A 898 33.010 97.433 82.158 1.00 26.17 N
ATOM 21 C2 G A 898 34.226 96.967 81.744 1.00 26.42 C
ATOM 22 N2 G A 898 35.201 97.879 81.651 1.00 25.56 N
ATOM 23 N3 G A 898 34.466 95.703 81.438 1.00 27.83 N
ATOM 24 C4 G A 898 33.364 94.937 81.577 1.00 28.37 C
ATOM 25 P A A 899 35.691 90.618 84.898 1.00 26.76 P
ATOM 26 OP1 A A 899 36.185 89.375 85.536 1.00 21.40 O
ATOM 27 OP2 A A 899 34.462 91.278 85.412 1.00 25.15 O
ATOM 28 O5' A A 899 36.846 91.713 84.932 1.00 27.63 O
TER
ATOM 1 O3' A B1250 26.759 99.775 86.607 1.00 33.31 O
ATOM 2 P G B1251 27.423 99.723 85.152 1.00 32.81 P
ATOM 3 OP1 G B1251 27.052 100.981 84.465 1.00 32.05 O
ATOM 4 OP2 G B1251 27.084 98.417 84.538 1.00 34.70 O
ATOM 5 O5' G B1251 28.993 99.694 85.412 1.00 32.45 O
ATOM 6 C5' G B1251 29.680 100.808 86.001 1.00 30.00 C
ATOM 7 C4' G B1251 31.131 100.459 86.217 1.00 30.27 C
ATOM 8 O4' G B1251 31.206 99.249 87.006 1.00 29.87 O
ATOM 9 C3' G B1251 31.949 100.165 84.966 1.00 29.08 C
ATOM 10 O3' G B1251 32.463 101.396 84.453 1.00 31.01 O
ATOM 11 C2' G B1251 33.038 99.247 85.501 1.00 29.39 C
ATOM 12 O2' G B1251 34.023 99.965 86.221 1.00 30.78 O
ATOM 13 C1' G B1251 32.255 98.426 86.522 1.00 30.64 C
ATOM 14 N9 G B1251 31.653 97.186 86.041 1.00 31.52 N
ATOM 15 C8 G B1251 30.313 96.970 85.830 1.00 33.11 C
ATOM 16 N7 G B1251 30.037 95.740 85.509 1.00 33.95 N
ATOM 17 C5 G B1251 31.269 95.108 85.481 1.00 31.57 C
ATOM 18 C6 G B1251 31.584 93.768 85.224 1.00 32.81 C
ATOM 19 O6 G B1251 30.813 92.836 84.969 1.00 35.49 O
ATOM 20 N1 G B1251 32.952 93.543 85.294 1.00 33.18 N
ATOM 21 C2 G B1251 33.893 94.494 85.581 1.00 32.93 C
ATOM 22 N2 G B1251 35.167 94.074 85.599 1.00 31.79 N
ATOM 23 N3 G B1251 33.606 95.759 85.832 1.00 32.09 N
ATOM 24 C4 G B1251 32.282 95.993 85.773 1.00 30.85 C
ATOM 25 P U B1252 33.385 101.415 83.133 1.00 31.38 P
ATOM 26 OP1 U B1252 33.013 102.655 82.393 1.00 29.72 O
ATOM 27 OP2 U B1252 33.330 100.104 82.444 1.00 29.59 O
ATOM 28 O5' U B1252 34.861 101.586 83.705 1.00 30.53 O
TER
ATOM 2 P G A 898 30.452 89.455 82.109 1.00 31.30 P
ATOM 3 OP1 G A 898 30.589 88.148 82.811 1.00 28.72 O
ATOM 4 OP2 G A 898 29.503 90.475 82.628 1.00 28.89 O
ATOM 5 O5' G A 898 31.895 90.122 82.053 1.00 31.77 O
ATOM 6 C5' G A 898 33.015 89.443 81.447 1.00 30.65 C
ATOM 7 C4' G A 898 34.175 90.403 81.284 1.00 30.60 C
ATOM 8 O4' G A 898 33.767 91.497 80.420 1.00 31.58 O
ATOM 9 C3' G A 898 34.637 91.106 82.553 1.00 28.99 C
ATOM 10 O3' G A 898 35.515 90.305 83.332 1.00 26.15 O
ATOM 11 C2' G A 898 35.312 92.346 81.996 1.00 28.34 C
ATOM 12 O2' G A 898 36.562 92.052 81.409 1.00 32.63 O
ATOM 13 C1' G A 898 34.350 92.712 80.873 1.00 29.30 C
ATOM 14 N9 G A 898 33.277 93.587 81.332 1.00 28.15 N
ATOM 15 C8 G A 898 31.984 93.227 81.606 1.00 28.20 C
ATOM 16 N7 G A 898 31.247 94.227 82.001 1.00 29.20 N
ATOM 17 C5 G A 898 32.105 95.314 81.984 1.00 27.42 C
ATOM 18 C6 G A 898 31.867 96.664 82.305 1.00 26.56 C
ATOM 19 O6 G A 898 30.817 97.194 82.668 1.00 28.76 O
ATOM 20 N1 G A 898 33.010 97.433 82.158 1.00 26.17 N
ATOM 21 C2 G A 898 34.226 96.967 81.744 1.00 26.42 C
ATOM 22 N2 G A 898 35.201 97.879 81.651 1.00 25.56 N
ATOM 23 N3 G A 898 34.466 95.703 81.438 1.00 27.83 N
ATOM 24 C4 G A 898 33.364 94.937 81.577 1.00 28.37 C
ATOM 25 P A A 899 35.691 90.618 84.898 1.00 26.76 P
ATOM 26 OP1 A A 899 36.185 89.375 85.536 1.00 21.40 O
ATOM 27 OP2 A A 899 34.462 91.278 85.412 1.00 25.15 O
ATOM 28 O5' A A 899 36.846 91.713 84.932 1.00 27.63 O
TER
ATOM 1 O3' A B1250 26.759 99.775 86.607 1.00 33.31 O
ATOM 2 P G B1251 27.423 99.723 85.152 1.00 32.81 P
ATOM 3 OP1 G B1251 27.052 100.981 84.465 1.00 32.05 O
ATOM 4 OP2 G B1251 27.084 98.417 84.538 1.00 34.70 O
ATOM 5 O5' G B1251 28.993 99.694 85.412 1.00 32.45 O
ATOM 6 C5' G B1251 29.680 100.808 86.001 1.00 30.00 C
ATOM 7 C4' G B1251 31.131 100.459 86.217 1.00 30.27 C
ATOM 8 O4' G B1251 31.206 99.249 87.006 1.00 29.87 O
ATOM 9 C3' G B1251 31.949 100.165 84.966 1.00 29.08 C
ATOM 10 O3' G B1251 32.463 101.396 84.453 1.00 31.01 O
ATOM 11 C2' G B1251 33.038 99.247 85.501 1.00 29.39 C
ATOM 12 O2' G B1251 34.023 99.965 86.221 1.00 30.78 O
ATOM 13 C1' G B1251 32.255 98.426 86.522 1.00 30.64 C
ATOM 14 N9 G B1251 31.653 97.186 86.041 1.00 31.52 N
ATOM 15 C8 G B1251 30.313 96.970 85.830 1.00 33.11 C
ATOM 16 N7 G B1251 30.037 95.740 85.509 1.00 33.95 N
ATOM 17 C5 G B1251 31.269 95.108 85.481 1.00 31.57 C
ATOM 18 C6 G B1251 31.584 93.768 85.224 1.00 32.81 C
ATOM 19 O6 G B1251 30.813 92.836 84.969 1.00 35.49 O
ATOM 20 N1 G B1251 32.952 93.543 85.294 1.00 33.18 N
ATOM 21 C2 G B1251 33.893 94.494 85.581 1.00 32.93 C
ATOM 22 N2 G B1251 35.167 94.074 85.599 1.00 31.79 N
ATOM 23 N3 G B1251 33.606 95.759 85.832 1.00 32.09 N
ATOM 24 C4 G B1251 32.282 95.993 85.773 1.00 30.85 C
ATOM 25 P U B1252 33.385 101.415 83.133 1.00 31.38 P
ATOM 26 OP1 U B1252 33.013 102.655 82.393 1.00 29.72 O
ATOM 27 OP2 U B1252 33.330 100.104 82.444 1.00 29.59 O
ATOM 28 O5' U B1252 34.861 101.586 83.705 1.00 30.53 O
TER
Atoms:
OP1: (30.589,88.148,82.811)
OP2: (29.503,90.475,82.628)
C3': (34.637,91.106,82.553)
C1': (34.350,92.712,80.873)
C5': (33.015,89.443,81.447)
O6: (30.817,97.194,82.668)
O4': (33.767,91.497,80.420)
C8: (31.984,93.227,81.606)
C2: (34.226,96.967,81.744)
C6: (31.867,96.664,82.305)
C5: (32.105,95.314,81.984)
C4: (33.364,94.937,81.577)
P: (30.452,89.455,82.109)
C4': (34.175,90.403,81.284)
C2': (35.312,92.346,81.996)
O2': (36.562,92.052,81.409)
N1: (33.010,97.433,82.158)
N2: (35.201,97.879,81.651)
N3: (34.466,95.703,81.438)
N7: (31.247,94.227,82.001)
N9: (33.277,93.587,81.332)
O5': (31.895,90.122,82.053)
O3': (35.515,90.305,83.332)
OP2: (29.503,90.475,82.628)
C3': (34.637,91.106,82.553)
C1': (34.350,92.712,80.873)
C5': (33.015,89.443,81.447)
O6: (30.817,97.194,82.668)
O4': (33.767,91.497,80.420)
C8: (31.984,93.227,81.606)
C2: (34.226,96.967,81.744)
C6: (31.867,96.664,82.305)
C5: (32.105,95.314,81.984)
C4: (33.364,94.937,81.577)
P: (30.452,89.455,82.109)
C4': (34.175,90.403,81.284)
C2': (35.312,92.346,81.996)
O2': (36.562,92.052,81.409)
N1: (33.010,97.433,82.158)
N2: (35.201,97.879,81.651)
N3: (34.466,95.703,81.438)
N7: (31.247,94.227,82.001)
N9: (33.277,93.587,81.332)
O5': (31.895,90.122,82.053)
O3': (35.515,90.305,83.332)
OP1: (27.052,100.981,84.465)
OP2: (27.084,98.417,84.538)
C3': (31.949,100.165,84.966)
C1': (32.255,98.426,86.522)
C5': (29.680,100.808,86.001)
O6: (30.813,92.836,84.969)
O4': (31.206,99.249,87.006)
C8: (30.313,96.970,85.830)
C2: (33.893,94.494,85.581)
C6: (31.584,93.768,85.224)
C5: (31.269,95.108,85.481)
C4: (32.282,95.993,85.773)
P: (27.423,99.723,85.152)
C4': (31.131,100.459,86.217)
C2': (33.038,99.247,85.501)
O2': (34.023,99.965,86.221)
N1: (32.952,93.543,85.294)
N2: (35.167,94.074,85.599)
N3: (33.606,95.759,85.832)
N7: (30.037,95.740,85.509)
N9: (31.653,97.186,86.041)
O5': (28.993,99.694,85.412)
O3': (32.463,101.396,84.453)
OP2: (27.084,98.417,84.538)
C3': (31.949,100.165,84.966)
C1': (32.255,98.426,86.522)
C5': (29.680,100.808,86.001)
O6: (30.813,92.836,84.969)
O4': (31.206,99.249,87.006)
C8: (30.313,96.970,85.830)
C2: (33.893,94.494,85.581)
C6: (31.584,93.768,85.224)
C5: (31.269,95.108,85.481)
C4: (32.282,95.993,85.773)
P: (27.423,99.723,85.152)
C4': (31.131,100.459,86.217)
C2': (33.038,99.247,85.501)
O2': (34.023,99.965,86.221)
N1: (32.952,93.543,85.294)
N2: (35.167,94.074,85.599)
N3: (33.606,95.759,85.832)
N7: (30.037,95.740,85.509)
N9: (31.653,97.186,86.041)
O5': (28.993,99.694,85.412)
O3': (32.463,101.396,84.453)
Image (generated by PyMOL):