Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0898:01251
Extra
PDB:
ATOM 1 O3' C A 897 30.187 89.451 80.944 1.00 36.59 O
ATOM 2 P G A 898 30.523 89.707 82.501 1.00 37.18 P
ATOM 3 OP1 G A 898 30.617 88.383 83.168 1.00 35.71 O
ATOM 4 OP2 G A 898 29.579 90.729 83.022 1.00 35.45 O
ATOM 5 O5' G A 898 31.971 90.379 82.498 1.00 39.61 O
ATOM 6 C5' G A 898 33.091 89.768 81.810 1.00 38.70 C
ATOM 7 C4' G A 898 34.235 90.758 81.677 1.00 38.40 C
ATOM 8 O4' G A 898 33.819 91.882 80.859 1.00 37.99 O
ATOM 9 C3' G A 898 34.714 91.416 82.962 1.00 38.26 C
ATOM 10 O3' G A 898 35.604 90.584 83.703 1.00 36.15 O
ATOM 11 C2' G A 898 35.392 92.671 82.441 1.00 37.74 C
ATOM 12 O2' G A 898 36.644 92.377 81.849 1.00 42.36 O
ATOM 13 C1' G A 898 34.434 93.074 81.327 1.00 37.53 C
ATOM 14 N9 G A 898 33.380 93.971 81.776 1.00 37.36 N
ATOM 15 C8 G A 898 32.089 93.617 82.060 1.00 40.25 C
ATOM 16 N7 G A 898 31.345 94.630 82.407 1.00 41.39 N
ATOM 17 C5 G A 898 32.198 95.716 82.358 1.00 37.93 C
ATOM 18 C6 G A 898 31.944 97.068 82.611 1.00 38.25 C
ATOM 19 O6 G A 898 30.880 97.597 82.934 1.00 42.95 O
ATOM 20 N1 G A 898 33.079 97.843 82.444 1.00 34.97 N
ATOM 21 C2 G A 898 34.302 97.373 82.075 1.00 33.24 C
ATOM 22 N2 G A 898 35.261 98.292 81.965 1.00 30.83 N
ATOM 23 N3 G A 898 34.559 96.098 81.830 1.00 35.36 N
ATOM 24 C4 G A 898 33.463 95.330 81.984 1.00 37.10 C
ATOM 25 P A A 899 35.838 90.874 85.268 1.00 35.39 P
ATOM 26 OP1 A A 899 36.275 89.597 85.875 1.00 30.03 O
ATOM 27 OP2 A A 899 34.652 91.582 85.827 1.00 30.98 O
ATOM 28 O5' A A 899 37.042 91.918 85.248 1.00 34.91 O
TER
ATOM 1 O3' A B1250 26.994 100.075 86.973 1.00 41.74 O
ATOM 2 P G B1251 27.574 100.011 85.485 1.00 43.11 P
ATOM 3 OP1 G B1251 27.136 101.254 84.801 1.00 40.94 O
ATOM 4 OP2 G B1251 27.229 98.693 84.905 1.00 43.81 O
ATOM 5 O5' G B1251 29.154 100.019 85.676 1.00 41.80 O
ATOM 6 C5' G B1251 29.823 101.112 86.330 1.00 39.41 C
ATOM 7 C4' G B1251 31.277 100.776 86.539 1.00 37.32 C
ATOM 8 O4' G B1251 31.364 99.553 87.308 1.00 35.66 O
ATOM 9 C3' G B1251 32.090 100.507 85.280 1.00 36.72 C
ATOM 10 O3' G B1251 32.585 101.740 84.752 1.00 36.70 O
ATOM 11 C2' G B1251 33.194 99.595 85.803 1.00 38.16 C
ATOM 12 O2' G B1251 34.192 100.308 86.522 1.00 39.26 O
ATOM 13 C1' G B1251 32.423 98.753 86.817 1.00 37.76 C
ATOM 14 N9 G B1251 31.847 97.500 86.334 1.00 39.47 N
ATOM 15 C8 G B1251 30.512 97.249 86.141 1.00 41.16 C
ATOM 16 N7 G B1251 30.267 96.014 85.816 1.00 42.12 N
ATOM 17 C5 G B1251 31.513 95.414 85.768 1.00 40.24 C
ATOM 18 C6 G B1251 31.862 94.081 85.503 1.00 42.07 C
ATOM 19 O6 G B1251 31.116 93.122 85.266 1.00 44.19 O
ATOM 20 N1 G B1251 33.236 93.893 85.549 1.00 43.23 N
ATOM 21 C2 G B1251 34.153 94.865 85.825 1.00 42.86 C
ATOM 22 N2 G B1251 35.438 94.477 85.819 1.00 41.36 N
ATOM 23 N3 G B1251 33.836 96.121 86.089 1.00 42.78 N
ATOM 24 C4 G B1251 32.504 96.322 86.049 1.00 40.28 C
ATOM 25 P U B1252 33.502 101.752 83.425 1.00 38.09 P
ATOM 26 OP1 U B1252 33.172 103.007 82.690 1.00 36.84 O
ATOM 27 OP2 U B1252 33.394 100.452 82.729 1.00 38.68 O
ATOM 28 O5' U B1252 34.991 101.885 83.979 1.00 37.73 O
TER
ATOM 2 P G A 898 30.523 89.707 82.501 1.00 37.18 P
ATOM 3 OP1 G A 898 30.617 88.383 83.168 1.00 35.71 O
ATOM 4 OP2 G A 898 29.579 90.729 83.022 1.00 35.45 O
ATOM 5 O5' G A 898 31.971 90.379 82.498 1.00 39.61 O
ATOM 6 C5' G A 898 33.091 89.768 81.810 1.00 38.70 C
ATOM 7 C4' G A 898 34.235 90.758 81.677 1.00 38.40 C
ATOM 8 O4' G A 898 33.819 91.882 80.859 1.00 37.99 O
ATOM 9 C3' G A 898 34.714 91.416 82.962 1.00 38.26 C
ATOM 10 O3' G A 898 35.604 90.584 83.703 1.00 36.15 O
ATOM 11 C2' G A 898 35.392 92.671 82.441 1.00 37.74 C
ATOM 12 O2' G A 898 36.644 92.377 81.849 1.00 42.36 O
ATOM 13 C1' G A 898 34.434 93.074 81.327 1.00 37.53 C
ATOM 14 N9 G A 898 33.380 93.971 81.776 1.00 37.36 N
ATOM 15 C8 G A 898 32.089 93.617 82.060 1.00 40.25 C
ATOM 16 N7 G A 898 31.345 94.630 82.407 1.00 41.39 N
ATOM 17 C5 G A 898 32.198 95.716 82.358 1.00 37.93 C
ATOM 18 C6 G A 898 31.944 97.068 82.611 1.00 38.25 C
ATOM 19 O6 G A 898 30.880 97.597 82.934 1.00 42.95 O
ATOM 20 N1 G A 898 33.079 97.843 82.444 1.00 34.97 N
ATOM 21 C2 G A 898 34.302 97.373 82.075 1.00 33.24 C
ATOM 22 N2 G A 898 35.261 98.292 81.965 1.00 30.83 N
ATOM 23 N3 G A 898 34.559 96.098 81.830 1.00 35.36 N
ATOM 24 C4 G A 898 33.463 95.330 81.984 1.00 37.10 C
ATOM 25 P A A 899 35.838 90.874 85.268 1.00 35.39 P
ATOM 26 OP1 A A 899 36.275 89.597 85.875 1.00 30.03 O
ATOM 27 OP2 A A 899 34.652 91.582 85.827 1.00 30.98 O
ATOM 28 O5' A A 899 37.042 91.918 85.248 1.00 34.91 O
TER
ATOM 1 O3' A B1250 26.994 100.075 86.973 1.00 41.74 O
ATOM 2 P G B1251 27.574 100.011 85.485 1.00 43.11 P
ATOM 3 OP1 G B1251 27.136 101.254 84.801 1.00 40.94 O
ATOM 4 OP2 G B1251 27.229 98.693 84.905 1.00 43.81 O
ATOM 5 O5' G B1251 29.154 100.019 85.676 1.00 41.80 O
ATOM 6 C5' G B1251 29.823 101.112 86.330 1.00 39.41 C
ATOM 7 C4' G B1251 31.277 100.776 86.539 1.00 37.32 C
ATOM 8 O4' G B1251 31.364 99.553 87.308 1.00 35.66 O
ATOM 9 C3' G B1251 32.090 100.507 85.280 1.00 36.72 C
ATOM 10 O3' G B1251 32.585 101.740 84.752 1.00 36.70 O
ATOM 11 C2' G B1251 33.194 99.595 85.803 1.00 38.16 C
ATOM 12 O2' G B1251 34.192 100.308 86.522 1.00 39.26 O
ATOM 13 C1' G B1251 32.423 98.753 86.817 1.00 37.76 C
ATOM 14 N9 G B1251 31.847 97.500 86.334 1.00 39.47 N
ATOM 15 C8 G B1251 30.512 97.249 86.141 1.00 41.16 C
ATOM 16 N7 G B1251 30.267 96.014 85.816 1.00 42.12 N
ATOM 17 C5 G B1251 31.513 95.414 85.768 1.00 40.24 C
ATOM 18 C6 G B1251 31.862 94.081 85.503 1.00 42.07 C
ATOM 19 O6 G B1251 31.116 93.122 85.266 1.00 44.19 O
ATOM 20 N1 G B1251 33.236 93.893 85.549 1.00 43.23 N
ATOM 21 C2 G B1251 34.153 94.865 85.825 1.00 42.86 C
ATOM 22 N2 G B1251 35.438 94.477 85.819 1.00 41.36 N
ATOM 23 N3 G B1251 33.836 96.121 86.089 1.00 42.78 N
ATOM 24 C4 G B1251 32.504 96.322 86.049 1.00 40.28 C
ATOM 25 P U B1252 33.502 101.752 83.425 1.00 38.09 P
ATOM 26 OP1 U B1252 33.172 103.007 82.690 1.00 36.84 O
ATOM 27 OP2 U B1252 33.394 100.452 82.729 1.00 38.68 O
ATOM 28 O5' U B1252 34.991 101.885 83.979 1.00 37.73 O
TER
Atoms:
OP1: (30.617,88.383,83.168)
OP2: (29.579,90.729,83.022)
C3': (34.714,91.416,82.962)
C1': (34.434,93.074,81.327)
C5': (33.091,89.768,81.810)
O6: (30.880,97.597,82.934)
O4': (33.819,91.882,80.859)
C8: (32.089,93.617,82.060)
C2: (34.302,97.373,82.075)
C6: (31.944,97.068,82.611)
C5: (32.198,95.716,82.358)
C4: (33.463,95.330,81.984)
P: (30.523,89.707,82.501)
C4': (34.235,90.758,81.677)
C2': (35.392,92.671,82.441)
O2': (36.644,92.377,81.849)
N1: (33.079,97.843,82.444)
N2: (35.261,98.292,81.965)
N3: (34.559,96.098,81.830)
N7: (31.345,94.630,82.407)
N9: (33.380,93.971,81.776)
O5': (31.971,90.379,82.498)
O3': (35.604,90.584,83.703)
OP2: (29.579,90.729,83.022)
C3': (34.714,91.416,82.962)
C1': (34.434,93.074,81.327)
C5': (33.091,89.768,81.810)
O6: (30.880,97.597,82.934)
O4': (33.819,91.882,80.859)
C8: (32.089,93.617,82.060)
C2: (34.302,97.373,82.075)
C6: (31.944,97.068,82.611)
C5: (32.198,95.716,82.358)
C4: (33.463,95.330,81.984)
P: (30.523,89.707,82.501)
C4': (34.235,90.758,81.677)
C2': (35.392,92.671,82.441)
O2': (36.644,92.377,81.849)
N1: (33.079,97.843,82.444)
N2: (35.261,98.292,81.965)
N3: (34.559,96.098,81.830)
N7: (31.345,94.630,82.407)
N9: (33.380,93.971,81.776)
O5': (31.971,90.379,82.498)
O3': (35.604,90.584,83.703)
OP1: (27.136,101.254,84.801)
OP2: (27.229,98.693,84.905)
C3': (32.090,100.507,85.280)
C1': (32.423,98.753,86.817)
C5': (29.823,101.112,86.330)
O6: (31.116,93.122,85.266)
O4': (31.364,99.553,87.308)
C8: (30.512,97.249,86.141)
C2: (34.153,94.865,85.825)
C6: (31.862,94.081,85.503)
C5: (31.513,95.414,85.768)
C4: (32.504,96.322,86.049)
P: (27.574,100.011,85.485)
C4': (31.277,100.776,86.539)
C2': (33.194,99.595,85.803)
O2': (34.192,100.308,86.522)
N1: (33.236,93.893,85.549)
N2: (35.438,94.477,85.819)
N3: (33.836,96.121,86.089)
N7: (30.267,96.014,85.816)
N9: (31.847,97.500,86.334)
O5': (29.154,100.019,85.676)
O3': (32.585,101.740,84.752)
OP2: (27.229,98.693,84.905)
C3': (32.090,100.507,85.280)
C1': (32.423,98.753,86.817)
C5': (29.823,101.112,86.330)
O6: (31.116,93.122,85.266)
O4': (31.364,99.553,87.308)
C8: (30.512,97.249,86.141)
C2: (34.153,94.865,85.825)
C6: (31.862,94.081,85.503)
C5: (31.513,95.414,85.768)
C4: (32.504,96.322,86.049)
P: (27.574,100.011,85.485)
C4': (31.277,100.776,86.539)
C2': (33.194,99.595,85.803)
O2': (34.192,100.308,86.522)
N1: (33.236,93.893,85.549)
N2: (35.438,94.477,85.819)
N3: (33.836,96.121,86.089)
N7: (30.267,96.014,85.816)
N9: (31.847,97.500,86.334)
O5': (29.154,100.019,85.676)
O3': (32.585,101.740,84.752)
Image (generated by PyMOL):