Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A424:A425
Extra
PDB:
ATOM 1 O3' G A 423 -63.297 -40.853 81.610 1.00 0.01 O
ATOM 2 P G A 424 -63.180 -42.275 80.857 1.00 1.77 P
ATOM 3 OP1 G A 424 -62.454 -42.033 79.604 1.00 1.77 O
ATOM 4 OP2 G A 424 -64.542 -42.855 80.797 1.00 1.77 O
ATOM 5 O5' G A 424 -62.273 -43.128 81.832 1.00 1.77 O
ATOM 6 C5' G A 424 -60.921 -43.379 81.512 1.00 1.77 C
ATOM 7 C4' G A 424 -60.245 -44.167 82.596 1.00 1.77 C
ATOM 8 O4' G A 424 -60.939 -43.980 83.859 1.00 1.77 O
ATOM 9 C3' G A 424 -60.255 -45.670 82.441 1.00 1.77 C
ATOM 10 O3' G A 424 -59.372 -46.139 81.448 1.00 1.77 O
ATOM 11 C2' G A 424 -59.915 -46.128 83.854 1.00 1.77 C
ATOM 12 O2' G A 424 -58.532 -45.955 84.140 1.00 1.77 O
ATOM 13 C1' G A 424 -60.710 -45.116 84.680 1.00 1.77 C
ATOM 14 N9 G A 424 -61.992 -45.671 85.108 1.00 1.67 N
ATOM 15 C8 G A 424 -63.281 -45.366 84.760 1.00 1.67 C
ATOM 16 N7 G A 424 -64.150 -46.145 85.360 1.00 1.67 N
ATOM 17 C5 G A 424 -63.360 -46.999 86.107 1.00 1.67 C
ATOM 18 C6 G A 424 -63.733 -48.040 86.952 1.00 1.67 C
ATOM 19 O6 G A 424 -64.898 -48.357 87.164 1.00 1.67 O
ATOM 20 N1 G A 424 -62.631 -48.662 87.537 1.00 1.67 N
ATOM 21 C2 G A 424 -61.339 -48.280 87.293 1.00 1.67 C
ATOM 22 N2 G A 424 -60.355 -48.949 87.894 1.00 1.67 N
ATOM 23 N3 G A 424 -60.979 -47.303 86.495 1.00 1.67 N
ATOM 24 C4 G A 424 -62.041 -46.721 85.954 1.00 1.67 C
ATOM 25 P C A 425 -59.739 -47.464 80.611 1.00 3.69 P
ATOM 26 OP1 C A 425 -59.013 -47.368 79.326 1.00 3.69 O
ATOM 27 OP2 C A 425 -61.219 -47.583 80.577 1.00 3.69 O
ATOM 28 O5' C A 425 -59.128 -48.627 81.523 1.00 3.69 O
TER
ATOM 1 O3' G B 424 -59.372 -46.139 81.448 1.00 1.77 O
ATOM 2 P C B 425 -59.739 -47.464 80.611 1.00 3.69 P
ATOM 3 OP1 C B 425 -59.013 -47.368 79.326 1.00 3.69 O
ATOM 4 OP2 C B 425 -61.219 -47.583 80.577 1.00 3.69 O
ATOM 5 O5' C B 425 -59.128 -48.627 81.523 1.00 3.69 O
ATOM 6 C5' C B 425 -57.788 -48.554 81.973 1.00 3.69 C
ATOM 7 C4' C B 425 -57.507 -49.554 83.059 1.00 3.69 C
ATOM 8 O4' C B 425 -58.289 -49.240 84.235 1.00 3.69 O
ATOM 9 C3' C B 425 -57.877 -50.980 82.759 1.00 3.69 C
ATOM 10 O3' C B 425 -56.945 -51.637 81.937 1.00 3.69 O
ATOM 11 C2' C B 425 -58.003 -51.579 84.148 1.00 3.69 C
ATOM 12 O2' C B 425 -56.729 -51.830 84.719 1.00 3.69 O
ATOM 13 C1' C B 425 -58.648 -50.424 84.900 1.00 3.69 C
ATOM 14 N1 C B 425 -60.085 -50.515 84.880 1.00 3.54 N
ATOM 15 C2 C B 425 -60.690 -51.397 85.746 1.00 3.54 C
ATOM 16 O2 C B 425 -59.953 -52.056 86.470 1.00 3.54 O
ATOM 17 N3 C B 425 -62.033 -51.494 85.750 1.00 3.54 N
ATOM 18 C4 C B 425 -62.740 -50.720 84.924 1.00 3.54 C
ATOM 19 N4 C B 425 -64.061 -50.833 84.931 1.00 3.54 N
ATOM 20 C5 C B 425 -62.135 -49.799 84.030 1.00 3.54 C
ATOM 21 C6 C B 425 -60.800 -49.728 84.032 1.00 3.54 C
ATOM 22 P U B 426 -57.459 -52.804 80.987 1.00 3.54 P
ATOM 23 OP1 U B 426 -56.281 -53.401 80.335 1.00 3.54 O
ATOM 24 OP2 U B 426 -58.546 -52.225 80.117 1.00 3.54 O
ATOM 25 O5' U B 426 -58.064 -53.836 82.040 1.00 3.54 O
TER
ATOM 2 P G A 424 -63.180 -42.275 80.857 1.00 1.77 P
ATOM 3 OP1 G A 424 -62.454 -42.033 79.604 1.00 1.77 O
ATOM 4 OP2 G A 424 -64.542 -42.855 80.797 1.00 1.77 O
ATOM 5 O5' G A 424 -62.273 -43.128 81.832 1.00 1.77 O
ATOM 6 C5' G A 424 -60.921 -43.379 81.512 1.00 1.77 C
ATOM 7 C4' G A 424 -60.245 -44.167 82.596 1.00 1.77 C
ATOM 8 O4' G A 424 -60.939 -43.980 83.859 1.00 1.77 O
ATOM 9 C3' G A 424 -60.255 -45.670 82.441 1.00 1.77 C
ATOM 10 O3' G A 424 -59.372 -46.139 81.448 1.00 1.77 O
ATOM 11 C2' G A 424 -59.915 -46.128 83.854 1.00 1.77 C
ATOM 12 O2' G A 424 -58.532 -45.955 84.140 1.00 1.77 O
ATOM 13 C1' G A 424 -60.710 -45.116 84.680 1.00 1.77 C
ATOM 14 N9 G A 424 -61.992 -45.671 85.108 1.00 1.67 N
ATOM 15 C8 G A 424 -63.281 -45.366 84.760 1.00 1.67 C
ATOM 16 N7 G A 424 -64.150 -46.145 85.360 1.00 1.67 N
ATOM 17 C5 G A 424 -63.360 -46.999 86.107 1.00 1.67 C
ATOM 18 C6 G A 424 -63.733 -48.040 86.952 1.00 1.67 C
ATOM 19 O6 G A 424 -64.898 -48.357 87.164 1.00 1.67 O
ATOM 20 N1 G A 424 -62.631 -48.662 87.537 1.00 1.67 N
ATOM 21 C2 G A 424 -61.339 -48.280 87.293 1.00 1.67 C
ATOM 22 N2 G A 424 -60.355 -48.949 87.894 1.00 1.67 N
ATOM 23 N3 G A 424 -60.979 -47.303 86.495 1.00 1.67 N
ATOM 24 C4 G A 424 -62.041 -46.721 85.954 1.00 1.67 C
ATOM 25 P C A 425 -59.739 -47.464 80.611 1.00 3.69 P
ATOM 26 OP1 C A 425 -59.013 -47.368 79.326 1.00 3.69 O
ATOM 27 OP2 C A 425 -61.219 -47.583 80.577 1.00 3.69 O
ATOM 28 O5' C A 425 -59.128 -48.627 81.523 1.00 3.69 O
TER
ATOM 1 O3' G B 424 -59.372 -46.139 81.448 1.00 1.77 O
ATOM 2 P C B 425 -59.739 -47.464 80.611 1.00 3.69 P
ATOM 3 OP1 C B 425 -59.013 -47.368 79.326 1.00 3.69 O
ATOM 4 OP2 C B 425 -61.219 -47.583 80.577 1.00 3.69 O
ATOM 5 O5' C B 425 -59.128 -48.627 81.523 1.00 3.69 O
ATOM 6 C5' C B 425 -57.788 -48.554 81.973 1.00 3.69 C
ATOM 7 C4' C B 425 -57.507 -49.554 83.059 1.00 3.69 C
ATOM 8 O4' C B 425 -58.289 -49.240 84.235 1.00 3.69 O
ATOM 9 C3' C B 425 -57.877 -50.980 82.759 1.00 3.69 C
ATOM 10 O3' C B 425 -56.945 -51.637 81.937 1.00 3.69 O
ATOM 11 C2' C B 425 -58.003 -51.579 84.148 1.00 3.69 C
ATOM 12 O2' C B 425 -56.729 -51.830 84.719 1.00 3.69 O
ATOM 13 C1' C B 425 -58.648 -50.424 84.900 1.00 3.69 C
ATOM 14 N1 C B 425 -60.085 -50.515 84.880 1.00 3.54 N
ATOM 15 C2 C B 425 -60.690 -51.397 85.746 1.00 3.54 C
ATOM 16 O2 C B 425 -59.953 -52.056 86.470 1.00 3.54 O
ATOM 17 N3 C B 425 -62.033 -51.494 85.750 1.00 3.54 N
ATOM 18 C4 C B 425 -62.740 -50.720 84.924 1.00 3.54 C
ATOM 19 N4 C B 425 -64.061 -50.833 84.931 1.00 3.54 N
ATOM 20 C5 C B 425 -62.135 -49.799 84.030 1.00 3.54 C
ATOM 21 C6 C B 425 -60.800 -49.728 84.032 1.00 3.54 C
ATOM 22 P U B 426 -57.459 -52.804 80.987 1.00 3.54 P
ATOM 23 OP1 U B 426 -56.281 -53.401 80.335 1.00 3.54 O
ATOM 24 OP2 U B 426 -58.546 -52.225 80.117 1.00 3.54 O
ATOM 25 O5' U B 426 -58.064 -53.836 82.040 1.00 3.54 O
TER
Atoms:
OP1: (-62.454,-42.033,79.604)
OP2: (-64.542,-42.855,80.797)
C3': (-60.255,-45.670,82.441)
C1': (-60.710,-45.116,84.680)
C5': (-60.921,-43.379,81.512)
O6: (-64.898,-48.357,87.164)
O4': (-60.939,-43.980,83.859)
C8: (-63.281,-45.366,84.760)
C2: (-61.339,-48.280,87.293)
C6: (-63.733,-48.040,86.952)
C5: (-63.360,-46.999,86.107)
C4: (-62.041,-46.721,85.954)
P: (-63.180,-42.275,80.857)
C4': (-60.245,-44.167,82.596)
C2': (-59.915,-46.128,83.854)
O2': (-58.532,-45.955,84.140)
N1: (-62.631,-48.662,87.537)
N2: (-60.355,-48.949,87.894)
N3: (-60.979,-47.303,86.495)
N7: (-64.150,-46.145,85.360)
N9: (-61.992,-45.671,85.108)
O5': (-62.273,-43.128,81.832)
O3': (-59.372,-46.139,81.448)
OP2: (-64.542,-42.855,80.797)
C3': (-60.255,-45.670,82.441)
C1': (-60.710,-45.116,84.680)
C5': (-60.921,-43.379,81.512)
O6: (-64.898,-48.357,87.164)
O4': (-60.939,-43.980,83.859)
C8: (-63.281,-45.366,84.760)
C2: (-61.339,-48.280,87.293)
C6: (-63.733,-48.040,86.952)
C5: (-63.360,-46.999,86.107)
C4: (-62.041,-46.721,85.954)
P: (-63.180,-42.275,80.857)
C4': (-60.245,-44.167,82.596)
C2': (-59.915,-46.128,83.854)
O2': (-58.532,-45.955,84.140)
N1: (-62.631,-48.662,87.537)
N2: (-60.355,-48.949,87.894)
N3: (-60.979,-47.303,86.495)
N7: (-64.150,-46.145,85.360)
N9: (-61.992,-45.671,85.108)
O5': (-62.273,-43.128,81.832)
O3': (-59.372,-46.139,81.448)
C2: (-60.690,-51.397,85.746)
OP1: (-59.013,-47.368,79.326)
OP2: (-61.219,-47.583,80.577)
C4: (-62.740,-50.720,84.924)
O5': (-59.128,-48.627,81.523)
C3': (-57.877,-50.980,82.759)
C1': (-58.648,-50.424,84.900)
O4': (-58.289,-49.240,84.235)
C5': (-57.788,-48.554,81.973)
P: (-59.739,-47.464,80.611)
O2: (-59.953,-52.056,86.470)
C4': (-57.507,-49.554,83.059)
C2': (-58.003,-51.579,84.148)
O2': (-56.729,-51.830,84.719)
N1: (-60.085,-50.515,84.880)
N3: (-62.033,-51.494,85.750)
N4: (-64.061,-50.833,84.931)
C6: (-60.800,-49.728,84.032)
C5: (-62.135,-49.799,84.030)
O3': (-56.945,-51.637,81.937)
OP1: (-59.013,-47.368,79.326)
OP2: (-61.219,-47.583,80.577)
C4: (-62.740,-50.720,84.924)
O5': (-59.128,-48.627,81.523)
C3': (-57.877,-50.980,82.759)
C1': (-58.648,-50.424,84.900)
O4': (-58.289,-49.240,84.235)
C5': (-57.788,-48.554,81.973)
P: (-59.739,-47.464,80.611)
O2: (-59.953,-52.056,86.470)
C4': (-57.507,-49.554,83.059)
C2': (-58.003,-51.579,84.148)
O2': (-56.729,-51.830,84.719)
N1: (-60.085,-50.515,84.880)
N3: (-62.033,-51.494,85.750)
N4: (-64.061,-50.833,84.931)
C6: (-60.800,-49.728,84.032)
C5: (-62.135,-49.799,84.030)
O3': (-56.945,-51.637,81.937)
Image (generated by PyMOL):