Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:977:9101
Extra
PDB:
ATOM 1 O3' A A 76 39.492 62.312 125.754 1.00 65.11 O
ATOM 2 P G A 77 38.076 61.824 126.321 1.00 67.86 P
ATOM 3 OP1 G A 77 37.813 62.651 127.535 1.00 65.92 O
ATOM 4 OP2 G A 77 38.109 60.333 126.431 1.00 67.23 O
ATOM 5 O5' G A 77 37.045 62.222 125.171 1.00 64.25 O
ATOM 6 C5' G A 77 36.798 63.605 124.844 1.00 61.97 C
ATOM 7 C4' G A 77 37.881 64.117 123.922 1.00 60.20 C
ATOM 8 O4' G A 77 37.932 63.294 122.719 1.00 58.94 O
ATOM 9 C3' G A 77 37.756 65.558 123.432 1.00 58.41 C
ATOM 10 O3' G A 77 39.092 66.061 123.304 1.00 57.57 O
ATOM 11 C2' G A 77 37.107 65.372 122.065 1.00 56.56 C
ATOM 12 O2' G A 77 37.315 66.450 121.184 1.00 57.58 O
ATOM 13 C1' G A 77 37.846 64.128 121.581 1.00 56.10 C
ATOM 14 N9 G A 77 37.236 63.379 120.488 1.00 53.42 N
ATOM 15 C8 G A 77 35.897 63.177 120.254 1.00 52.07 C
ATOM 16 N7 G A 77 35.668 62.438 119.204 1.00 51.96 N
ATOM 17 C5 G A 77 36.932 62.131 118.714 1.00 50.69 C
ATOM 18 C6 G A 77 37.319 61.348 117.596 1.00 49.86 C
ATOM 19 O6 G A 77 36.600 60.734 116.796 1.00 49.55 O
ATOM 20 N1 G A 77 38.701 61.312 117.452 1.00 49.72 N
ATOM 21 C2 G A 77 39.598 61.942 118.273 1.00 50.11 C
ATOM 22 N2 G A 77 40.896 61.784 117.954 1.00 49.96 N
ATOM 23 N3 G A 77 39.252 62.670 119.325 1.00 49.70 N
ATOM 24 C4 G A 77 37.911 62.717 119.485 1.00 51.35 C
ATOM 25 P U A 78 39.357 67.565 122.805 1.00 57.48 P
ATOM 26 OP1 U A 78 38.359 68.490 123.420 1.00 56.09 O
ATOM 27 OP2 U A 78 39.514 67.538 121.332 1.00 56.44 O
ATOM 28 O5' U A 78 40.792 67.884 123.408 1.00 56.05 O
TER
ATOM 1 O3' G B 100 37.135 63.000 110.724 1.00 46.92 O
ATOM 2 P G B 101 37.435 61.785 111.723 1.00 48.18 P
ATOM 3 OP1 G B 101 37.826 60.613 110.886 1.00 47.71 O
ATOM 4 OP2 G B 101 36.300 61.669 112.677 1.00 47.44 O
ATOM 5 O5' G B 101 38.731 62.249 112.517 1.00 46.35 O
ATOM 6 C5' G B 101 40.027 62.134 111.912 1.00 48.56 C
ATOM 7 C4' G B 101 41.062 62.766 112.792 1.00 48.36 C
ATOM 8 O4' G B 101 40.619 64.113 113.118 1.00 51.01 O
ATOM 9 C3' G B 101 41.213 62.126 114.154 1.00 46.93 C
ATOM 10 O3' G B 101 42.015 60.972 114.107 1.00 44.81 O
ATOM 11 C2' G B 101 41.826 63.256 114.960 1.00 47.93 C
ATOM 12 O2' G B 101 43.178 63.486 114.629 1.00 46.90 O
ATOM 13 C1' G B 101 41.008 64.436 114.446 1.00 49.98 C
ATOM 14 N9 G B 101 39.804 64.670 115.241 1.00 51.57 N
ATOM 15 C8 G B 101 38.497 64.436 114.877 1.00 51.55 C
ATOM 16 N7 G B 101 37.641 64.775 115.802 1.00 51.50 N
ATOM 17 C5 G B 101 38.429 65.257 116.841 1.00 51.19 C
ATOM 18 C6 G B 101 38.063 65.784 118.106 1.00 51.50 C
ATOM 19 O6 G B 101 36.929 65.945 118.575 1.00 53.13 O
ATOM 20 N1 G B 101 39.179 66.153 118.849 1.00 50.38 N
ATOM 21 C2 G B 101 40.479 66.044 118.428 1.00 50.37 C
ATOM 22 N2 G B 101 41.417 66.478 119.275 1.00 48.87 N
ATOM 23 N3 G B 101 40.834 65.554 117.257 1.00 51.86 N
ATOM 24 C4 G B 101 39.764 65.187 116.516 1.00 51.60 C
ATOM 25 P A B 102 41.884 59.881 115.275 1.00 43.98 P
ATOM 26 OP1 A B 102 42.534 58.635 114.774 1.00 39.59 O
ATOM 27 OP2 A B 102 40.477 59.838 115.748 1.00 44.24 O
ATOM 28 O5' A B 102 42.759 60.495 116.448 1.00 42.16 O
TER
ATOM 2 P G A 77 38.076 61.824 126.321 1.00 67.86 P
ATOM 3 OP1 G A 77 37.813 62.651 127.535 1.00 65.92 O
ATOM 4 OP2 G A 77 38.109 60.333 126.431 1.00 67.23 O
ATOM 5 O5' G A 77 37.045 62.222 125.171 1.00 64.25 O
ATOM 6 C5' G A 77 36.798 63.605 124.844 1.00 61.97 C
ATOM 7 C4' G A 77 37.881 64.117 123.922 1.00 60.20 C
ATOM 8 O4' G A 77 37.932 63.294 122.719 1.00 58.94 O
ATOM 9 C3' G A 77 37.756 65.558 123.432 1.00 58.41 C
ATOM 10 O3' G A 77 39.092 66.061 123.304 1.00 57.57 O
ATOM 11 C2' G A 77 37.107 65.372 122.065 1.00 56.56 C
ATOM 12 O2' G A 77 37.315 66.450 121.184 1.00 57.58 O
ATOM 13 C1' G A 77 37.846 64.128 121.581 1.00 56.10 C
ATOM 14 N9 G A 77 37.236 63.379 120.488 1.00 53.42 N
ATOM 15 C8 G A 77 35.897 63.177 120.254 1.00 52.07 C
ATOM 16 N7 G A 77 35.668 62.438 119.204 1.00 51.96 N
ATOM 17 C5 G A 77 36.932 62.131 118.714 1.00 50.69 C
ATOM 18 C6 G A 77 37.319 61.348 117.596 1.00 49.86 C
ATOM 19 O6 G A 77 36.600 60.734 116.796 1.00 49.55 O
ATOM 20 N1 G A 77 38.701 61.312 117.452 1.00 49.72 N
ATOM 21 C2 G A 77 39.598 61.942 118.273 1.00 50.11 C
ATOM 22 N2 G A 77 40.896 61.784 117.954 1.00 49.96 N
ATOM 23 N3 G A 77 39.252 62.670 119.325 1.00 49.70 N
ATOM 24 C4 G A 77 37.911 62.717 119.485 1.00 51.35 C
ATOM 25 P U A 78 39.357 67.565 122.805 1.00 57.48 P
ATOM 26 OP1 U A 78 38.359 68.490 123.420 1.00 56.09 O
ATOM 27 OP2 U A 78 39.514 67.538 121.332 1.00 56.44 O
ATOM 28 O5' U A 78 40.792 67.884 123.408 1.00 56.05 O
TER
ATOM 1 O3' G B 100 37.135 63.000 110.724 1.00 46.92 O
ATOM 2 P G B 101 37.435 61.785 111.723 1.00 48.18 P
ATOM 3 OP1 G B 101 37.826 60.613 110.886 1.00 47.71 O
ATOM 4 OP2 G B 101 36.300 61.669 112.677 1.00 47.44 O
ATOM 5 O5' G B 101 38.731 62.249 112.517 1.00 46.35 O
ATOM 6 C5' G B 101 40.027 62.134 111.912 1.00 48.56 C
ATOM 7 C4' G B 101 41.062 62.766 112.792 1.00 48.36 C
ATOM 8 O4' G B 101 40.619 64.113 113.118 1.00 51.01 O
ATOM 9 C3' G B 101 41.213 62.126 114.154 1.00 46.93 C
ATOM 10 O3' G B 101 42.015 60.972 114.107 1.00 44.81 O
ATOM 11 C2' G B 101 41.826 63.256 114.960 1.00 47.93 C
ATOM 12 O2' G B 101 43.178 63.486 114.629 1.00 46.90 O
ATOM 13 C1' G B 101 41.008 64.436 114.446 1.00 49.98 C
ATOM 14 N9 G B 101 39.804 64.670 115.241 1.00 51.57 N
ATOM 15 C8 G B 101 38.497 64.436 114.877 1.00 51.55 C
ATOM 16 N7 G B 101 37.641 64.775 115.802 1.00 51.50 N
ATOM 17 C5 G B 101 38.429 65.257 116.841 1.00 51.19 C
ATOM 18 C6 G B 101 38.063 65.784 118.106 1.00 51.50 C
ATOM 19 O6 G B 101 36.929 65.945 118.575 1.00 53.13 O
ATOM 20 N1 G B 101 39.179 66.153 118.849 1.00 50.38 N
ATOM 21 C2 G B 101 40.479 66.044 118.428 1.00 50.37 C
ATOM 22 N2 G B 101 41.417 66.478 119.275 1.00 48.87 N
ATOM 23 N3 G B 101 40.834 65.554 117.257 1.00 51.86 N
ATOM 24 C4 G B 101 39.764 65.187 116.516 1.00 51.60 C
ATOM 25 P A B 102 41.884 59.881 115.275 1.00 43.98 P
ATOM 26 OP1 A B 102 42.534 58.635 114.774 1.00 39.59 O
ATOM 27 OP2 A B 102 40.477 59.838 115.748 1.00 44.24 O
ATOM 28 O5' A B 102 42.759 60.495 116.448 1.00 42.16 O
TER
Atoms:
OP1: (37.813,62.651,127.535)
OP2: (38.109,60.333,126.431)
C3': (37.756,65.558,123.432)
C1': (37.846,64.128,121.581)
C5': (36.798,63.605,124.844)
O6: (36.600,60.734,116.796)
O4': (37.932,63.294,122.719)
C8: (35.897,63.177,120.254)
C2: (39.598,61.942,118.273)
C6: (37.319,61.348,117.596)
C5: (36.932,62.131,118.714)
C4: (37.911,62.717,119.485)
P: (38.076,61.824,126.321)
C4': (37.881,64.117,123.922)
C2': (37.107,65.372,122.065)
O2': (37.315,66.450,121.184)
N1: (38.701,61.312,117.452)
N2: (40.896,61.784,117.954)
N3: (39.252,62.670,119.325)
N7: (35.668,62.438,119.204)
N9: (37.236,63.379,120.488)
O5': (37.045,62.222,125.171)
O3': (39.092,66.061,123.304)
OP2: (38.109,60.333,126.431)
C3': (37.756,65.558,123.432)
C1': (37.846,64.128,121.581)
C5': (36.798,63.605,124.844)
O6: (36.600,60.734,116.796)
O4': (37.932,63.294,122.719)
C8: (35.897,63.177,120.254)
C2: (39.598,61.942,118.273)
C6: (37.319,61.348,117.596)
C5: (36.932,62.131,118.714)
C4: (37.911,62.717,119.485)
P: (38.076,61.824,126.321)
C4': (37.881,64.117,123.922)
C2': (37.107,65.372,122.065)
O2': (37.315,66.450,121.184)
N1: (38.701,61.312,117.452)
N2: (40.896,61.784,117.954)
N3: (39.252,62.670,119.325)
N7: (35.668,62.438,119.204)
N9: (37.236,63.379,120.488)
O5': (37.045,62.222,125.171)
O3': (39.092,66.061,123.304)
OP1: (37.826,60.613,110.886)
OP2: (36.300,61.669,112.677)
C3': (41.213,62.126,114.154)
C1': (41.008,64.436,114.446)
C5': (40.027,62.134,111.912)
O6: (36.929,65.945,118.575)
O4': (40.619,64.113,113.118)
C8: (38.497,64.436,114.877)
C2: (40.479,66.044,118.428)
C6: (38.063,65.784,118.106)
C5: (38.429,65.257,116.841)
C4: (39.764,65.187,116.516)
P: (37.435,61.785,111.723)
C4': (41.062,62.766,112.792)
C2': (41.826,63.256,114.960)
O2': (43.178,63.486,114.629)
N1: (39.179,66.153,118.849)
N2: (41.417,66.478,119.275)
N3: (40.834,65.554,117.257)
N7: (37.641,64.775,115.802)
N9: (39.804,64.670,115.241)
O5': (38.731,62.249,112.517)
O3': (42.015,60.972,114.107)
OP2: (36.300,61.669,112.677)
C3': (41.213,62.126,114.154)
C1': (41.008,64.436,114.446)
C5': (40.027,62.134,111.912)
O6: (36.929,65.945,118.575)
O4': (40.619,64.113,113.118)
C8: (38.497,64.436,114.877)
C2: (40.479,66.044,118.428)
C6: (38.063,65.784,118.106)
C5: (38.429,65.257,116.841)
C4: (39.764,65.187,116.516)
P: (37.435,61.785,111.723)
C4': (41.062,62.766,112.792)
C2': (41.826,63.256,114.960)
O2': (43.178,63.486,114.629)
N1: (39.179,66.153,118.849)
N2: (41.417,66.478,119.275)
N3: (40.834,65.554,117.257)
N7: (37.641,64.775,115.802)
N9: (39.804,64.670,115.241)
O5': (38.731,62.249,112.517)
O3': (42.015,60.972,114.107)
Image (generated by PyMOL):