Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0898:01251
Extra
PDB:
ATOM 1 O3' C A 897 30.022 89.340 80.594 1.00 35.91 O
ATOM 2 P G A 898 30.439 89.559 82.130 1.00 35.10 P
ATOM 3 OP1 G A 898 30.615 88.228 82.776 1.00 33.82 O
ATOM 4 OP2 G A 898 29.494 90.541 82.716 1.00 34.02 O
ATOM 5 O5' G A 898 31.868 90.248 82.025 1.00 37.29 O
ATOM 6 C5' G A 898 32.991 89.557 81.425 1.00 37.42 C
ATOM 7 C4' G A 898 34.169 90.497 81.281 1.00 36.34 C
ATOM 8 O4' G A 898 33.810 91.575 80.377 1.00 37.16 O
ATOM 9 C3' G A 898 34.606 91.220 82.547 1.00 34.59 C
ATOM 10 O3' G A 898 35.436 90.413 83.372 1.00 34.31 O
ATOM 11 C2' G A 898 35.320 92.435 81.981 1.00 34.65 C
ATOM 12 O2' G A 898 36.588 92.123 81.430 1.00 34.86 O
ATOM 13 C1' G A 898 34.383 92.794 80.832 1.00 35.94 C
ATOM 14 N9 G A 898 33.301 93.669 81.269 1.00 34.83 N
ATOM 15 C8 G A 898 32.001 93.309 81.509 1.00 35.20 C
ATOM 16 N7 G A 898 31.260 94.304 81.903 1.00 35.90 N
ATOM 17 C5 G A 898 32.121 95.387 81.922 1.00 33.84 C
ATOM 18 C6 G A 898 31.879 96.723 82.264 1.00 33.51 C
ATOM 19 O6 G A 898 30.825 97.241 82.629 1.00 34.59 O
ATOM 20 N1 G A 898 33.022 97.496 82.144 1.00 34.59 N
ATOM 21 C2 G A 898 34.246 97.037 81.736 1.00 34.78 C
ATOM 22 N2 G A 898 35.229 97.950 81.672 1.00 34.65 N
ATOM 23 N3 G A 898 34.487 95.780 81.412 1.00 34.63 N
ATOM 24 C4 G A 898 33.384 95.015 81.528 1.00 34.69 C
ATOM 25 P A A 899 35.626 90.792 84.923 1.00 34.62 P
ATOM 26 OP1 A A 899 36.045 89.552 85.628 1.00 31.63 O
ATOM 27 OP2 A A 899 34.441 91.538 85.403 1.00 32.88 O
ATOM 28 O5' A A 899 36.837 91.824 84.895 1.00 34.50 O
TER
ATOM 1 O3' A B1250 26.669 99.849 86.603 1.00 38.16 O
ATOM 2 P G B1251 27.394 99.827 85.173 1.00 39.05 P
ATOM 3 OP1 G B1251 27.108 101.125 84.514 1.00 38.93 O
ATOM 4 OP2 G B1251 27.024 98.565 84.500 1.00 38.85 O
ATOM 5 O5' G B1251 28.954 99.766 85.495 1.00 37.34 O
ATOM 6 C5' G B1251 29.654 100.918 86.009 1.00 36.13 C
ATOM 7 C4' G B1251 31.109 100.586 86.237 1.00 35.26 C
ATOM 8 O4' G B1251 31.183 99.382 87.037 1.00 34.62 O
ATOM 9 C3' G B1251 31.937 100.281 84.997 1.00 34.09 C
ATOM 10 O3' G B1251 32.468 101.499 84.468 1.00 33.78 O
ATOM 11 C2' G B1251 33.023 99.373 85.550 1.00 34.73 C
ATOM 12 O2' G B1251 34.002 100.105 86.263 1.00 35.08 O
ATOM 13 C1' G B1251 32.233 98.557 86.570 1.00 35.15 C
ATOM 14 N9 G B1251 31.639 97.314 86.086 1.00 36.03 N
ATOM 15 C8 G B1251 30.306 97.096 85.842 1.00 38.19 C
ATOM 16 N7 G B1251 30.041 95.866 85.506 1.00 38.22 N
ATOM 17 C5 G B1251 31.275 95.236 85.507 1.00 35.55 C
ATOM 18 C6 G B1251 31.602 93.898 85.250 1.00 36.00 C
ATOM 19 O6 G B1251 30.842 92.958 84.988 1.00 35.84 O
ATOM 20 N1 G B1251 32.968 93.679 85.346 1.00 36.93 N
ATOM 21 C2 G B1251 33.899 94.627 85.678 1.00 36.54 C
ATOM 22 N2 G B1251 35.179 94.211 85.731 1.00 33.95 N
ATOM 23 N3 G B1251 33.599 95.886 85.941 1.00 36.11 N
ATOM 24 C4 G B1251 32.277 96.119 85.837 1.00 35.02 C
ATOM 25 P U B1252 33.402 101.481 83.155 1.00 32.17 P
ATOM 26 OP1 U B1252 33.075 102.723 82.403 1.00 31.90 O
ATOM 27 OP2 U B1252 33.299 100.164 82.476 1.00 29.30 O
ATOM 28 O5' U B1252 34.881 101.631 83.729 1.00 30.36 O
TER
ATOM 2 P G A 898 30.439 89.559 82.130 1.00 35.10 P
ATOM 3 OP1 G A 898 30.615 88.228 82.776 1.00 33.82 O
ATOM 4 OP2 G A 898 29.494 90.541 82.716 1.00 34.02 O
ATOM 5 O5' G A 898 31.868 90.248 82.025 1.00 37.29 O
ATOM 6 C5' G A 898 32.991 89.557 81.425 1.00 37.42 C
ATOM 7 C4' G A 898 34.169 90.497 81.281 1.00 36.34 C
ATOM 8 O4' G A 898 33.810 91.575 80.377 1.00 37.16 O
ATOM 9 C3' G A 898 34.606 91.220 82.547 1.00 34.59 C
ATOM 10 O3' G A 898 35.436 90.413 83.372 1.00 34.31 O
ATOM 11 C2' G A 898 35.320 92.435 81.981 1.00 34.65 C
ATOM 12 O2' G A 898 36.588 92.123 81.430 1.00 34.86 O
ATOM 13 C1' G A 898 34.383 92.794 80.832 1.00 35.94 C
ATOM 14 N9 G A 898 33.301 93.669 81.269 1.00 34.83 N
ATOM 15 C8 G A 898 32.001 93.309 81.509 1.00 35.20 C
ATOM 16 N7 G A 898 31.260 94.304 81.903 1.00 35.90 N
ATOM 17 C5 G A 898 32.121 95.387 81.922 1.00 33.84 C
ATOM 18 C6 G A 898 31.879 96.723 82.264 1.00 33.51 C
ATOM 19 O6 G A 898 30.825 97.241 82.629 1.00 34.59 O
ATOM 20 N1 G A 898 33.022 97.496 82.144 1.00 34.59 N
ATOM 21 C2 G A 898 34.246 97.037 81.736 1.00 34.78 C
ATOM 22 N2 G A 898 35.229 97.950 81.672 1.00 34.65 N
ATOM 23 N3 G A 898 34.487 95.780 81.412 1.00 34.63 N
ATOM 24 C4 G A 898 33.384 95.015 81.528 1.00 34.69 C
ATOM 25 P A A 899 35.626 90.792 84.923 1.00 34.62 P
ATOM 26 OP1 A A 899 36.045 89.552 85.628 1.00 31.63 O
ATOM 27 OP2 A A 899 34.441 91.538 85.403 1.00 32.88 O
ATOM 28 O5' A A 899 36.837 91.824 84.895 1.00 34.50 O
TER
ATOM 1 O3' A B1250 26.669 99.849 86.603 1.00 38.16 O
ATOM 2 P G B1251 27.394 99.827 85.173 1.00 39.05 P
ATOM 3 OP1 G B1251 27.108 101.125 84.514 1.00 38.93 O
ATOM 4 OP2 G B1251 27.024 98.565 84.500 1.00 38.85 O
ATOM 5 O5' G B1251 28.954 99.766 85.495 1.00 37.34 O
ATOM 6 C5' G B1251 29.654 100.918 86.009 1.00 36.13 C
ATOM 7 C4' G B1251 31.109 100.586 86.237 1.00 35.26 C
ATOM 8 O4' G B1251 31.183 99.382 87.037 1.00 34.62 O
ATOM 9 C3' G B1251 31.937 100.281 84.997 1.00 34.09 C
ATOM 10 O3' G B1251 32.468 101.499 84.468 1.00 33.78 O
ATOM 11 C2' G B1251 33.023 99.373 85.550 1.00 34.73 C
ATOM 12 O2' G B1251 34.002 100.105 86.263 1.00 35.08 O
ATOM 13 C1' G B1251 32.233 98.557 86.570 1.00 35.15 C
ATOM 14 N9 G B1251 31.639 97.314 86.086 1.00 36.03 N
ATOM 15 C8 G B1251 30.306 97.096 85.842 1.00 38.19 C
ATOM 16 N7 G B1251 30.041 95.866 85.506 1.00 38.22 N
ATOM 17 C5 G B1251 31.275 95.236 85.507 1.00 35.55 C
ATOM 18 C6 G B1251 31.602 93.898 85.250 1.00 36.00 C
ATOM 19 O6 G B1251 30.842 92.958 84.988 1.00 35.84 O
ATOM 20 N1 G B1251 32.968 93.679 85.346 1.00 36.93 N
ATOM 21 C2 G B1251 33.899 94.627 85.678 1.00 36.54 C
ATOM 22 N2 G B1251 35.179 94.211 85.731 1.00 33.95 N
ATOM 23 N3 G B1251 33.599 95.886 85.941 1.00 36.11 N
ATOM 24 C4 G B1251 32.277 96.119 85.837 1.00 35.02 C
ATOM 25 P U B1252 33.402 101.481 83.155 1.00 32.17 P
ATOM 26 OP1 U B1252 33.075 102.723 82.403 1.00 31.90 O
ATOM 27 OP2 U B1252 33.299 100.164 82.476 1.00 29.30 O
ATOM 28 O5' U B1252 34.881 101.631 83.729 1.00 30.36 O
TER
Atoms:
OP1: (30.615,88.228,82.776)
OP2: (29.494,90.541,82.716)
C3': (34.606,91.220,82.547)
C1': (34.383,92.794,80.832)
C5': (32.991,89.557,81.425)
O6: (30.825,97.241,82.629)
O4': (33.810,91.575,80.377)
C8: (32.001,93.309,81.509)
C2: (34.246,97.037,81.736)
C6: (31.879,96.723,82.264)
C5: (32.121,95.387,81.922)
C4: (33.384,95.015,81.528)
P: (30.439,89.559,82.130)
C4': (34.169,90.497,81.281)
C2': (35.320,92.435,81.981)
O2': (36.588,92.123,81.430)
N1: (33.022,97.496,82.144)
N2: (35.229,97.950,81.672)
N3: (34.487,95.780,81.412)
N7: (31.260,94.304,81.903)
N9: (33.301,93.669,81.269)
O5': (31.868,90.248,82.025)
O3': (35.436,90.413,83.372)
OP2: (29.494,90.541,82.716)
C3': (34.606,91.220,82.547)
C1': (34.383,92.794,80.832)
C5': (32.991,89.557,81.425)
O6: (30.825,97.241,82.629)
O4': (33.810,91.575,80.377)
C8: (32.001,93.309,81.509)
C2: (34.246,97.037,81.736)
C6: (31.879,96.723,82.264)
C5: (32.121,95.387,81.922)
C4: (33.384,95.015,81.528)
P: (30.439,89.559,82.130)
C4': (34.169,90.497,81.281)
C2': (35.320,92.435,81.981)
O2': (36.588,92.123,81.430)
N1: (33.022,97.496,82.144)
N2: (35.229,97.950,81.672)
N3: (34.487,95.780,81.412)
N7: (31.260,94.304,81.903)
N9: (33.301,93.669,81.269)
O5': (31.868,90.248,82.025)
O3': (35.436,90.413,83.372)
OP1: (27.108,101.125,84.514)
OP2: (27.024,98.565,84.500)
C3': (31.937,100.281,84.997)
C1': (32.233,98.557,86.570)
C5': (29.654,100.918,86.009)
O6: (30.842,92.958,84.988)
O4': (31.183,99.382,87.037)
C8: (30.306,97.096,85.842)
C2: (33.899,94.627,85.678)
C6: (31.602,93.898,85.250)
C5: (31.275,95.236,85.507)
C4: (32.277,96.119,85.837)
P: (27.394,99.827,85.173)
C4': (31.109,100.586,86.237)
C2': (33.023,99.373,85.550)
O2': (34.002,100.105,86.263)
N1: (32.968,93.679,85.346)
N2: (35.179,94.211,85.731)
N3: (33.599,95.886,85.941)
N7: (30.041,95.866,85.506)
N9: (31.639,97.314,86.086)
O5': (28.954,99.766,85.495)
O3': (32.468,101.499,84.468)
OP2: (27.024,98.565,84.500)
C3': (31.937,100.281,84.997)
C1': (32.233,98.557,86.570)
C5': (29.654,100.918,86.009)
O6: (30.842,92.958,84.988)
O4': (31.183,99.382,87.037)
C8: (30.306,97.096,85.842)
C2: (33.899,94.627,85.678)
C6: (31.602,93.898,85.250)
C5: (31.275,95.236,85.507)
C4: (32.277,96.119,85.837)
P: (27.394,99.827,85.173)
C4': (31.109,100.586,86.237)
C2': (33.023,99.373,85.550)
O2': (34.002,100.105,86.263)
N1: (32.968,93.679,85.346)
N2: (35.179,94.211,85.731)
N3: (33.599,95.886,85.941)
N7: (30.041,95.866,85.506)
N9: (31.639,97.314,86.086)
O5': (28.954,99.766,85.495)
O3': (32.468,101.499,84.468)
Image (generated by PyMOL):