Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:977:9101
Extra
PDB:
ATOM 1 O3' A A 76 39.387 62.103 125.221 1.00 62.45 O
ATOM 2 P G A 77 37.958 61.746 125.833 1.00 62.56 P
ATOM 3 OP1 G A 77 37.718 62.722 126.924 1.00 60.20 O
ATOM 4 OP2 G A 77 37.934 60.288 126.125 1.00 63.56 O
ATOM 5 O5' G A 77 36.967 62.035 124.621 1.00 62.34 O
ATOM 6 C5' G A 77 36.691 63.385 124.202 1.00 60.13 C
ATOM 7 C4' G A 77 37.806 63.898 123.319 1.00 58.60 C
ATOM 8 O4' G A 77 37.922 63.081 122.114 1.00 56.65 O
ATOM 9 C3' G A 77 37.643 65.333 122.829 1.00 57.51 C
ATOM 10 O3' G A 77 38.946 65.892 122.712 1.00 57.25 O
ATOM 11 C2' G A 77 37.032 65.135 121.450 1.00 56.30 C
ATOM 12 O2' G A 77 37.203 66.239 120.588 1.00 56.57 O
ATOM 13 C1' G A 77 37.822 63.918 120.977 1.00 55.26 C
ATOM 14 N9 G A 77 37.228 63.162 119.880 1.00 52.75 N
ATOM 15 C8 G A 77 35.892 63.003 119.598 1.00 51.23 C
ATOM 16 N7 G A 77 35.677 62.260 118.548 1.00 50.74 N
ATOM 17 C5 G A 77 36.946 61.905 118.112 1.00 50.58 C
ATOM 18 C6 G A 77 37.346 61.093 117.024 1.00 50.44 C
ATOM 19 O6 G A 77 36.633 60.500 116.202 1.00 50.53 O
ATOM 20 N1 G A 77 38.733 60.996 116.940 1.00 50.85 N
ATOM 21 C2 G A 77 39.622 61.598 117.795 1.00 51.01 C
ATOM 22 N2 G A 77 40.924 61.382 117.542 1.00 48.98 N
ATOM 23 N3 G A 77 39.261 62.355 118.820 1.00 50.92 N
ATOM 24 C4 G A 77 37.915 62.461 118.918 1.00 51.73 C
ATOM 25 P U A 78 39.129 67.436 122.328 1.00 57.52 P
ATOM 26 OP1 U A 78 38.112 68.240 123.059 1.00 55.93 O
ATOM 27 OP2 U A 78 39.203 67.525 120.847 1.00 57.84 O
ATOM 28 O5' U A 78 40.577 67.772 122.896 1.00 55.70 O
TER
ATOM 1 O3' G B 100 37.028 62.784 110.296 1.00 45.71 O
ATOM 2 P G B 101 37.356 61.540 111.260 1.00 48.41 P
ATOM 3 OP1 G B 101 37.740 60.388 110.396 1.00 47.88 O
ATOM 4 OP2 G B 101 36.253 61.382 112.241 1.00 48.43 O
ATOM 5 O5' G B 101 38.656 62.005 112.048 1.00 47.27 O
ATOM 6 C5' G B 101 39.930 62.041 111.393 1.00 47.83 C
ATOM 7 C4' G B 101 40.962 62.614 112.319 1.00 47.37 C
ATOM 8 O4' G B 101 40.554 63.953 112.713 1.00 49.03 O
ATOM 9 C3' G B 101 41.083 61.902 113.647 1.00 46.63 C
ATOM 10 O3' G B 101 41.852 60.727 113.567 1.00 45.21 O
ATOM 11 C2' G B 101 41.723 62.969 114.517 1.00 47.77 C
ATOM 12 O2' G B 101 43.093 63.150 114.222 1.00 49.64 O
ATOM 13 C1' G B 101 40.956 64.202 114.054 1.00 47.40 C
ATOM 14 N9 G B 101 39.761 64.444 114.852 1.00 46.57 N
ATOM 15 C8 G B 101 38.463 64.159 114.505 1.00 47.17 C
ATOM 16 N7 G B 101 37.600 64.524 115.413 1.00 48.34 N
ATOM 17 C5 G B 101 38.375 65.077 116.423 1.00 47.89 C
ATOM 18 C6 G B 101 37.995 65.654 117.655 1.00 48.13 C
ATOM 19 O6 G B 101 36.858 65.825 118.103 1.00 50.46 O
ATOM 20 N1 G B 101 39.098 66.069 118.389 1.00 46.90 N
ATOM 21 C2 G B 101 40.400 65.962 117.982 1.00 46.88 C
ATOM 22 N2 G B 101 41.322 66.418 118.837 1.00 46.91 N
ATOM 23 N3 G B 101 40.771 65.445 116.823 1.00 47.30 N
ATOM 24 C4 G B 101 39.712 65.022 116.099 1.00 47.27 C
ATOM 25 P A B 102 41.718 59.638 114.729 1.00 44.99 P
ATOM 26 OP1 A B 102 42.298 58.363 114.228 1.00 42.56 O
ATOM 27 OP2 A B 102 40.319 59.667 115.218 1.00 43.80 O
ATOM 28 O5' A B 102 42.640 60.229 115.878 1.00 43.55 O
TER
ATOM 2 P G A 77 37.958 61.746 125.833 1.00 62.56 P
ATOM 3 OP1 G A 77 37.718 62.722 126.924 1.00 60.20 O
ATOM 4 OP2 G A 77 37.934 60.288 126.125 1.00 63.56 O
ATOM 5 O5' G A 77 36.967 62.035 124.621 1.00 62.34 O
ATOM 6 C5' G A 77 36.691 63.385 124.202 1.00 60.13 C
ATOM 7 C4' G A 77 37.806 63.898 123.319 1.00 58.60 C
ATOM 8 O4' G A 77 37.922 63.081 122.114 1.00 56.65 O
ATOM 9 C3' G A 77 37.643 65.333 122.829 1.00 57.51 C
ATOM 10 O3' G A 77 38.946 65.892 122.712 1.00 57.25 O
ATOM 11 C2' G A 77 37.032 65.135 121.450 1.00 56.30 C
ATOM 12 O2' G A 77 37.203 66.239 120.588 1.00 56.57 O
ATOM 13 C1' G A 77 37.822 63.918 120.977 1.00 55.26 C
ATOM 14 N9 G A 77 37.228 63.162 119.880 1.00 52.75 N
ATOM 15 C8 G A 77 35.892 63.003 119.598 1.00 51.23 C
ATOM 16 N7 G A 77 35.677 62.260 118.548 1.00 50.74 N
ATOM 17 C5 G A 77 36.946 61.905 118.112 1.00 50.58 C
ATOM 18 C6 G A 77 37.346 61.093 117.024 1.00 50.44 C
ATOM 19 O6 G A 77 36.633 60.500 116.202 1.00 50.53 O
ATOM 20 N1 G A 77 38.733 60.996 116.940 1.00 50.85 N
ATOM 21 C2 G A 77 39.622 61.598 117.795 1.00 51.01 C
ATOM 22 N2 G A 77 40.924 61.382 117.542 1.00 48.98 N
ATOM 23 N3 G A 77 39.261 62.355 118.820 1.00 50.92 N
ATOM 24 C4 G A 77 37.915 62.461 118.918 1.00 51.73 C
ATOM 25 P U A 78 39.129 67.436 122.328 1.00 57.52 P
ATOM 26 OP1 U A 78 38.112 68.240 123.059 1.00 55.93 O
ATOM 27 OP2 U A 78 39.203 67.525 120.847 1.00 57.84 O
ATOM 28 O5' U A 78 40.577 67.772 122.896 1.00 55.70 O
TER
ATOM 1 O3' G B 100 37.028 62.784 110.296 1.00 45.71 O
ATOM 2 P G B 101 37.356 61.540 111.260 1.00 48.41 P
ATOM 3 OP1 G B 101 37.740 60.388 110.396 1.00 47.88 O
ATOM 4 OP2 G B 101 36.253 61.382 112.241 1.00 48.43 O
ATOM 5 O5' G B 101 38.656 62.005 112.048 1.00 47.27 O
ATOM 6 C5' G B 101 39.930 62.041 111.393 1.00 47.83 C
ATOM 7 C4' G B 101 40.962 62.614 112.319 1.00 47.37 C
ATOM 8 O4' G B 101 40.554 63.953 112.713 1.00 49.03 O
ATOM 9 C3' G B 101 41.083 61.902 113.647 1.00 46.63 C
ATOM 10 O3' G B 101 41.852 60.727 113.567 1.00 45.21 O
ATOM 11 C2' G B 101 41.723 62.969 114.517 1.00 47.77 C
ATOM 12 O2' G B 101 43.093 63.150 114.222 1.00 49.64 O
ATOM 13 C1' G B 101 40.956 64.202 114.054 1.00 47.40 C
ATOM 14 N9 G B 101 39.761 64.444 114.852 1.00 46.57 N
ATOM 15 C8 G B 101 38.463 64.159 114.505 1.00 47.17 C
ATOM 16 N7 G B 101 37.600 64.524 115.413 1.00 48.34 N
ATOM 17 C5 G B 101 38.375 65.077 116.423 1.00 47.89 C
ATOM 18 C6 G B 101 37.995 65.654 117.655 1.00 48.13 C
ATOM 19 O6 G B 101 36.858 65.825 118.103 1.00 50.46 O
ATOM 20 N1 G B 101 39.098 66.069 118.389 1.00 46.90 N
ATOM 21 C2 G B 101 40.400 65.962 117.982 1.00 46.88 C
ATOM 22 N2 G B 101 41.322 66.418 118.837 1.00 46.91 N
ATOM 23 N3 G B 101 40.771 65.445 116.823 1.00 47.30 N
ATOM 24 C4 G B 101 39.712 65.022 116.099 1.00 47.27 C
ATOM 25 P A B 102 41.718 59.638 114.729 1.00 44.99 P
ATOM 26 OP1 A B 102 42.298 58.363 114.228 1.00 42.56 O
ATOM 27 OP2 A B 102 40.319 59.667 115.218 1.00 43.80 O
ATOM 28 O5' A B 102 42.640 60.229 115.878 1.00 43.55 O
TER
Atoms:
OP1: (37.718,62.722,126.924)
OP2: (37.934,60.288,126.125)
C3': (37.643,65.333,122.829)
C1': (37.822,63.918,120.977)
C5': (36.691,63.385,124.202)
O6: (36.633,60.500,116.202)
O4': (37.922,63.081,122.114)
C8: (35.892,63.003,119.598)
C2: (39.622,61.598,117.795)
C6: (37.346,61.093,117.024)
C5: (36.946,61.905,118.112)
C4: (37.915,62.461,118.918)
P: (37.958,61.746,125.833)
C4': (37.806,63.898,123.319)
C2': (37.032,65.135,121.450)
O2': (37.203,66.239,120.588)
N1: (38.733,60.996,116.940)
N2: (40.924,61.382,117.542)
N3: (39.261,62.355,118.820)
N7: (35.677,62.260,118.548)
N9: (37.228,63.162,119.880)
O5': (36.967,62.035,124.621)
O3': (38.946,65.892,122.712)
OP2: (37.934,60.288,126.125)
C3': (37.643,65.333,122.829)
C1': (37.822,63.918,120.977)
C5': (36.691,63.385,124.202)
O6: (36.633,60.500,116.202)
O4': (37.922,63.081,122.114)
C8: (35.892,63.003,119.598)
C2: (39.622,61.598,117.795)
C6: (37.346,61.093,117.024)
C5: (36.946,61.905,118.112)
C4: (37.915,62.461,118.918)
P: (37.958,61.746,125.833)
C4': (37.806,63.898,123.319)
C2': (37.032,65.135,121.450)
O2': (37.203,66.239,120.588)
N1: (38.733,60.996,116.940)
N2: (40.924,61.382,117.542)
N3: (39.261,62.355,118.820)
N7: (35.677,62.260,118.548)
N9: (37.228,63.162,119.880)
O5': (36.967,62.035,124.621)
O3': (38.946,65.892,122.712)
OP1: (37.740,60.388,110.396)
OP2: (36.253,61.382,112.241)
C3': (41.083,61.902,113.647)
C1': (40.956,64.202,114.054)
C5': (39.930,62.041,111.393)
O6: (36.858,65.825,118.103)
O4': (40.554,63.953,112.713)
C8: (38.463,64.159,114.505)
C2: (40.400,65.962,117.982)
C6: (37.995,65.654,117.655)
C5: (38.375,65.077,116.423)
C4: (39.712,65.022,116.099)
P: (37.356,61.540,111.260)
C4': (40.962,62.614,112.319)
C2': (41.723,62.969,114.517)
O2': (43.093,63.150,114.222)
N1: (39.098,66.069,118.389)
N2: (41.322,66.418,118.837)
N3: (40.771,65.445,116.823)
N7: (37.600,64.524,115.413)
N9: (39.761,64.444,114.852)
O5': (38.656,62.005,112.048)
O3': (41.852,60.727,113.567)
OP2: (36.253,61.382,112.241)
C3': (41.083,61.902,113.647)
C1': (40.956,64.202,114.054)
C5': (39.930,62.041,111.393)
O6: (36.858,65.825,118.103)
O4': (40.554,63.953,112.713)
C8: (38.463,64.159,114.505)
C2: (40.400,65.962,117.982)
C6: (37.995,65.654,117.655)
C5: (38.375,65.077,116.423)
C4: (39.712,65.022,116.099)
P: (37.356,61.540,111.260)
C4': (40.962,62.614,112.319)
C2': (41.723,62.969,114.517)
O2': (43.093,63.150,114.222)
N1: (39.098,66.069,118.389)
N2: (41.322,66.418,118.837)
N3: (40.771,65.445,116.823)
N7: (37.600,64.524,115.413)
N9: (39.761,64.444,114.852)
O5': (38.656,62.005,112.048)
O3': (41.852,60.727,113.567)
Image (generated by PyMOL):