Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A439:A460
Extra
PDB:
ATOM 1 O3' C A 438 -13.138 14.344 91.250 1.00 30.11 O
ATOM 2 P G A 439 -11.972 14.117 92.325 1.00 42.88 P
ATOM 3 OP1 G A 439 -10.712 13.806 91.585 1.00 28.43 O
ATOM 4 OP2 G A 439 -12.480 13.156 93.350 1.00 29.45 O
ATOM 5 O5' G A 439 -11.852 15.555 93.011 1.00 21.78 O
ATOM 6 C5' G A 439 -11.451 16.721 92.252 1.00 20.62 C
ATOM 7 C4' G A 439 -11.762 17.989 93.019 1.00 19.39 C
ATOM 8 O4' G A 439 -13.196 18.080 93.188 1.00 18.93 O
ATOM 9 C3' G A 439 -11.202 18.097 94.432 1.00 18.75 C
ATOM 10 O3' G A 439 -9.895 18.645 94.483 1.00 18.26 O
ATOM 11 C2' G A 439 -12.167 19.058 95.094 1.00 18.72 C
ATOM 12 O2' G A 439 -11.825 20.395 94.786 1.00 19.20 O
ATOM 13 C1' G A 439 -13.489 18.676 94.432 1.00 18.84 C
ATOM 14 N9 G A 439 -14.214 17.706 95.238 1.00 31.80 N
ATOM 15 C8 G A 439 -14.062 16.343 95.229 1.00 32.67 C
ATOM 16 N7 G A 439 -14.850 15.736 96.071 1.00 32.22 N
ATOM 17 C5 G A 439 -15.570 16.760 96.666 1.00 30.99 C
ATOM 18 C6 G A 439 -16.601 16.714 97.636 1.00 31.14 C
ATOM 19 O6 G A 439 -17.119 15.723 98.166 1.00 30.71 O
ATOM 20 N1 G A 439 -17.047 17.989 97.963 1.00 31.84 N
ATOM 21 C2 G A 439 -16.582 19.154 97.408 1.00 30.46 C
ATOM 22 N2 G A 439 -17.146 20.287 97.845 1.00 30.17 N
ATOM 23 N3 G A 439 -15.638 19.208 96.488 1.00 29.40 N
ATOM 24 C4 G A 439 -15.180 17.983 96.168 1.00 30.77 C
ATOM 25 P A A 440 -9.069 18.595 95.866 1.00 32.45 P
ATOM 26 OP1 A A 440 -10.027 18.810 96.979 1.00 17.67 O
ATOM 27 OP2 A A 440 -7.858 19.464 95.753 1.00 18.68 O
ATOM 28 O5' A A 440 -8.563 17.093 95.949 1.00 27.50 O
TER
ATOM 1 O3' U B 459 -12.068 11.083 105.158 1.00 21.61 O
ATOM 2 P G B 460 -13.531 11.255 104.522 1.00 37.87 P
ATOM 3 OP1 G B 460 -14.499 11.304 105.655 1.00 29.21 O
ATOM 4 OP2 G B 460 -13.699 10.231 103.465 1.00 30.27 O
ATOM 5 O5' G B 460 -13.483 12.692 103.821 1.00 20.90 O
ATOM 6 C5' G B 460 -13.398 13.907 104.615 1.00 18.10 C
ATOM 7 C4' G B 460 -14.417 14.929 104.149 1.00 16.02 C
ATOM 8 O4' G B 460 -14.024 15.456 102.858 1.00 16.12 O
ATOM 9 C3' G B 460 -15.843 14.420 103.997 1.00 15.22 C
ATOM 10 O3' G B 460 -16.759 15.435 104.355 1.00 14.92 O
ATOM 11 C2' G B 460 -15.974 14.195 102.502 1.00 15.75 C
ATOM 12 O2' G B 460 -17.305 14.368 102.091 1.00 15.60 O
ATOM 13 C1' G B 460 -15.087 15.304 101.939 1.00 16.03 C
ATOM 14 N9 G B 460 -14.504 15.015 100.632 1.00 23.03 N
ATOM 15 C8 G B 460 -14.643 13.873 99.884 1.00 23.24 C
ATOM 16 N7 G B 460 -13.935 13.891 98.789 1.00 23.60 N
ATOM 17 C5 G B 460 -13.304 15.124 98.808 1.00 23.82 C
ATOM 18 C6 G B 460 -12.389 15.693 97.896 1.00 24.18 C
ATOM 19 O6 G B 460 -11.921 15.195 96.869 1.00 26.03 O
ATOM 20 N1 G B 460 -12.004 16.972 98.284 1.00 23.09 N
ATOM 21 C2 G B 460 -12.435 17.618 99.419 1.00 22.49 C
ATOM 22 N2 G B 460 -11.957 18.865 99.616 1.00 21.10 N
ATOM 23 N3 G B 460 -13.273 17.082 100.293 1.00 23.99 N
ATOM 24 C4 G B 460 -13.664 15.841 99.924 1.00 24.05 C
ATOM 25 P A B 461 -17.593 15.307 105.720 1.00 62.73 P
ATOM 26 OP1 A B 461 -16.610 14.839 106.737 1.00 13.46 O
ATOM 27 OP2 A B 461 -18.853 14.548 105.494 1.00 13.09 O
ATOM 28 O5' A B 461 -18.007 16.812 106.025 1.00 39.41 O
TER
ATOM 2 P G A 439 -11.972 14.117 92.325 1.00 42.88 P
ATOM 3 OP1 G A 439 -10.712 13.806 91.585 1.00 28.43 O
ATOM 4 OP2 G A 439 -12.480 13.156 93.350 1.00 29.45 O
ATOM 5 O5' G A 439 -11.852 15.555 93.011 1.00 21.78 O
ATOM 6 C5' G A 439 -11.451 16.721 92.252 1.00 20.62 C
ATOM 7 C4' G A 439 -11.762 17.989 93.019 1.00 19.39 C
ATOM 8 O4' G A 439 -13.196 18.080 93.188 1.00 18.93 O
ATOM 9 C3' G A 439 -11.202 18.097 94.432 1.00 18.75 C
ATOM 10 O3' G A 439 -9.895 18.645 94.483 1.00 18.26 O
ATOM 11 C2' G A 439 -12.167 19.058 95.094 1.00 18.72 C
ATOM 12 O2' G A 439 -11.825 20.395 94.786 1.00 19.20 O
ATOM 13 C1' G A 439 -13.489 18.676 94.432 1.00 18.84 C
ATOM 14 N9 G A 439 -14.214 17.706 95.238 1.00 31.80 N
ATOM 15 C8 G A 439 -14.062 16.343 95.229 1.00 32.67 C
ATOM 16 N7 G A 439 -14.850 15.736 96.071 1.00 32.22 N
ATOM 17 C5 G A 439 -15.570 16.760 96.666 1.00 30.99 C
ATOM 18 C6 G A 439 -16.601 16.714 97.636 1.00 31.14 C
ATOM 19 O6 G A 439 -17.119 15.723 98.166 1.00 30.71 O
ATOM 20 N1 G A 439 -17.047 17.989 97.963 1.00 31.84 N
ATOM 21 C2 G A 439 -16.582 19.154 97.408 1.00 30.46 C
ATOM 22 N2 G A 439 -17.146 20.287 97.845 1.00 30.17 N
ATOM 23 N3 G A 439 -15.638 19.208 96.488 1.00 29.40 N
ATOM 24 C4 G A 439 -15.180 17.983 96.168 1.00 30.77 C
ATOM 25 P A A 440 -9.069 18.595 95.866 1.00 32.45 P
ATOM 26 OP1 A A 440 -10.027 18.810 96.979 1.00 17.67 O
ATOM 27 OP2 A A 440 -7.858 19.464 95.753 1.00 18.68 O
ATOM 28 O5' A A 440 -8.563 17.093 95.949 1.00 27.50 O
TER
ATOM 1 O3' U B 459 -12.068 11.083 105.158 1.00 21.61 O
ATOM 2 P G B 460 -13.531 11.255 104.522 1.00 37.87 P
ATOM 3 OP1 G B 460 -14.499 11.304 105.655 1.00 29.21 O
ATOM 4 OP2 G B 460 -13.699 10.231 103.465 1.00 30.27 O
ATOM 5 O5' G B 460 -13.483 12.692 103.821 1.00 20.90 O
ATOM 6 C5' G B 460 -13.398 13.907 104.615 1.00 18.10 C
ATOM 7 C4' G B 460 -14.417 14.929 104.149 1.00 16.02 C
ATOM 8 O4' G B 460 -14.024 15.456 102.858 1.00 16.12 O
ATOM 9 C3' G B 460 -15.843 14.420 103.997 1.00 15.22 C
ATOM 10 O3' G B 460 -16.759 15.435 104.355 1.00 14.92 O
ATOM 11 C2' G B 460 -15.974 14.195 102.502 1.00 15.75 C
ATOM 12 O2' G B 460 -17.305 14.368 102.091 1.00 15.60 O
ATOM 13 C1' G B 460 -15.087 15.304 101.939 1.00 16.03 C
ATOM 14 N9 G B 460 -14.504 15.015 100.632 1.00 23.03 N
ATOM 15 C8 G B 460 -14.643 13.873 99.884 1.00 23.24 C
ATOM 16 N7 G B 460 -13.935 13.891 98.789 1.00 23.60 N
ATOM 17 C5 G B 460 -13.304 15.124 98.808 1.00 23.82 C
ATOM 18 C6 G B 460 -12.389 15.693 97.896 1.00 24.18 C
ATOM 19 O6 G B 460 -11.921 15.195 96.869 1.00 26.03 O
ATOM 20 N1 G B 460 -12.004 16.972 98.284 1.00 23.09 N
ATOM 21 C2 G B 460 -12.435 17.618 99.419 1.00 22.49 C
ATOM 22 N2 G B 460 -11.957 18.865 99.616 1.00 21.10 N
ATOM 23 N3 G B 460 -13.273 17.082 100.293 1.00 23.99 N
ATOM 24 C4 G B 460 -13.664 15.841 99.924 1.00 24.05 C
ATOM 25 P A B 461 -17.593 15.307 105.720 1.00 62.73 P
ATOM 26 OP1 A B 461 -16.610 14.839 106.737 1.00 13.46 O
ATOM 27 OP2 A B 461 -18.853 14.548 105.494 1.00 13.09 O
ATOM 28 O5' A B 461 -18.007 16.812 106.025 1.00 39.41 O
TER
Atoms:
OP1: (-10.712,13.806,91.585)
OP2: (-12.480,13.156,93.350)
C3': (-11.202,18.097,94.432)
C1': (-13.489,18.676,94.432)
C5': (-11.451,16.721,92.252)
O6: (-17.119,15.723,98.166)
O4': (-13.196,18.080,93.188)
C8: (-14.062,16.343,95.229)
C2: (-16.582,19.154,97.408)
C6: (-16.601,16.714,97.636)
C5: (-15.570,16.760,96.666)
C4: (-15.180,17.983,96.168)
P: (-11.972,14.117,92.325)
C4': (-11.762,17.989,93.019)
C2': (-12.167,19.058,95.094)
O2': (-11.825,20.395,94.786)
N1: (-17.047,17.989,97.963)
N2: (-17.146,20.287,97.845)
N3: (-15.638,19.208,96.488)
N7: (-14.850,15.736,96.071)
N9: (-14.214,17.706,95.238)
O5': (-11.852,15.555,93.011)
O3': (-9.895,18.645,94.483)
OP2: (-12.480,13.156,93.350)
C3': (-11.202,18.097,94.432)
C1': (-13.489,18.676,94.432)
C5': (-11.451,16.721,92.252)
O6: (-17.119,15.723,98.166)
O4': (-13.196,18.080,93.188)
C8: (-14.062,16.343,95.229)
C2: (-16.582,19.154,97.408)
C6: (-16.601,16.714,97.636)
C5: (-15.570,16.760,96.666)
C4: (-15.180,17.983,96.168)
P: (-11.972,14.117,92.325)
C4': (-11.762,17.989,93.019)
C2': (-12.167,19.058,95.094)
O2': (-11.825,20.395,94.786)
N1: (-17.047,17.989,97.963)
N2: (-17.146,20.287,97.845)
N3: (-15.638,19.208,96.488)
N7: (-14.850,15.736,96.071)
N9: (-14.214,17.706,95.238)
O5': (-11.852,15.555,93.011)
O3': (-9.895,18.645,94.483)
OP1: (-14.499,11.304,105.655)
OP2: (-13.699,10.231,103.465)
C3': (-15.843,14.420,103.997)
C1': (-15.087,15.304,101.939)
C5': (-13.398,13.907,104.615)
O6: (-11.921,15.195,96.869)
O4': (-14.024,15.456,102.858)
C8: (-14.643,13.873,99.884)
C2: (-12.435,17.618,99.419)
C6: (-12.389,15.693,97.896)
C5: (-13.304,15.124,98.808)
C4: (-13.664,15.841,99.924)
P: (-13.531,11.255,104.522)
C4': (-14.417,14.929,104.149)
C2': (-15.974,14.195,102.502)
O2': (-17.305,14.368,102.091)
N1: (-12.004,16.972,98.284)
N2: (-11.957,18.865,99.616)
N3: (-13.273,17.082,100.293)
N7: (-13.935,13.891,98.789)
N9: (-14.504,15.015,100.632)
O5': (-13.483,12.692,103.821)
O3': (-16.759,15.435,104.355)
OP2: (-13.699,10.231,103.465)
C3': (-15.843,14.420,103.997)
C1': (-15.087,15.304,101.939)
C5': (-13.398,13.907,104.615)
O6: (-11.921,15.195,96.869)
O4': (-14.024,15.456,102.858)
C8: (-14.643,13.873,99.884)
C2: (-12.435,17.618,99.419)
C6: (-12.389,15.693,97.896)
C5: (-13.304,15.124,98.808)
C4: (-13.664,15.841,99.924)
P: (-13.531,11.255,104.522)
C4': (-14.417,14.929,104.149)
C2': (-15.974,14.195,102.502)
O2': (-17.305,14.368,102.091)
N1: (-12.004,16.972,98.284)
N2: (-11.957,18.865,99.616)
N3: (-13.273,17.082,100.293)
N7: (-13.935,13.891,98.789)
N9: (-14.504,15.015,100.632)
O5': (-13.483,12.692,103.821)
O3': (-16.759,15.435,104.355)
Image (generated by PyMOL):