Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1025:A1026
Extra
PDB:
ATOM 1 O3' U A1024 -62.185 97.483 193.952 1.00 44.07 O
ATOM 2 P G A1025 -61.343 98.840 194.130 1.00 36.86 P
ATOM 3 OP1 G A1025 -61.711 99.715 192.988 1.00 40.19 O
ATOM 4 OP2 G A1025 -59.914 98.476 194.358 1.00 39.86 O
ATOM 5 O5' G A1025 -61.932 99.496 195.454 1.00 36.38 O
ATOM 6 C5' G A1025 -63.265 100.048 195.484 1.00 36.38 C
ATOM 7 C4' G A1025 -63.632 100.453 196.898 1.00 36.38 C
ATOM 8 O4' G A1025 -63.637 99.262 197.731 1.00 36.38 O
ATOM 9 C3' G A1025 -62.671 101.413 197.594 1.00 36.38 C
ATOM 10 O3' G A1025 -62.921 102.793 197.285 1.00 36.38 O
ATOM 11 C2' G A1025 -62.863 101.064 199.070 1.00 36.38 C
ATOM 12 O2' G A1025 -63.994 101.680 199.658 1.00 36.38 O
ATOM 13 C1' G A1025 -63.066 99.547 198.999 1.00 36.38 C
ATOM 14 N9 G A1025 -61.796 98.825 199.062 1.00 37.43 N
ATOM 15 C8 G A1025 -60.987 98.525 197.989 1.00 37.26 C
ATOM 16 N7 G A1025 -59.886 97.914 198.325 1.00 37.16 N
ATOM 17 C5 G A1025 -59.972 97.788 199.701 1.00 37.14 C
ATOM 18 C6 G A1025 -59.073 97.220 200.596 1.00 37.10 C
ATOM 19 O6 G A1025 -57.977 96.710 200.347 1.00 37.06 O
ATOM 20 N1 G A1025 -59.542 97.286 201.901 1.00 37.30 N
ATOM 21 C2 G A1025 -60.740 97.843 202.285 1.00 37.33 C
ATOM 22 N2 G A1025 -61.025 97.801 203.594 1.00 37.33 N
ATOM 23 N3 G A1025 -61.595 98.397 201.447 1.00 37.30 N
ATOM 24 C4 G A1025 -61.151 98.334 200.176 1.00 37.32 C
ATOM 25 P G A1026 -61.792 103.905 197.603 1.00 63.08 P
ATOM 26 OP1 G A1026 -61.035 103.505 198.823 1.00 76.40 O
ATOM 27 OP2 G A1026 -62.458 105.232 197.558 1.00 76.54 O
ATOM 28 O5' G A1026 -60.760 103.829 196.390 1.00 34.25 O
TER
ATOM 1 O3' G B1025 -62.921 102.793 197.285 1.00 36.38 O
ATOM 2 P G B1026 -61.792 103.905 197.603 1.00 63.08 P
ATOM 3 OP1 G B1026 -61.035 103.505 198.823 1.00 76.40 O
ATOM 4 OP2 G B1026 -62.458 105.232 197.558 1.00 76.54 O
ATOM 5 O5' G B1026 -60.760 103.829 196.390 1.00 34.25 O
ATOM 6 C5' G B1026 -60.493 102.600 195.701 1.00 34.25 C
ATOM 7 C4' G B1026 -59.014 102.458 195.452 1.00 34.25 C
ATOM 8 O4' G B1026 -58.328 102.446 196.733 1.00 34.25 O
ATOM 9 C3' G B1026 -58.610 101.179 194.730 1.00 34.25 C
ATOM 10 O3' G B1026 -57.492 101.480 193.883 1.00 34.25 O
ATOM 11 C2' G B1026 -58.215 100.244 195.879 1.00 34.25 C
ATOM 12 O2' G B1026 -57.292 99.238 195.501 1.00 34.25 O
ATOM 13 C1' G B1026 -57.621 101.227 196.893 1.00 34.25 C
ATOM 14 N9 G B1026 -57.707 100.839 198.304 1.00 36.48 N
ATOM 15 C8 G B1026 -58.563 101.362 199.247 1.00 36.47 C
ATOM 16 N7 G B1026 -58.342 100.910 200.452 1.00 36.40 N
ATOM 17 C5 G B1026 -57.291 100.020 200.297 1.00 36.51 C
ATOM 18 C6 G B1026 -56.603 99.256 201.259 1.00 36.52 C
ATOM 19 O6 G B1026 -56.777 99.220 202.481 1.00 36.45 O
ATOM 20 N1 G B1026 -55.613 98.477 200.677 1.00 36.58 N
ATOM 21 C2 G B1026 -55.320 98.440 199.339 1.00 36.50 C
ATOM 22 N2 G B1026 -54.328 97.611 198.972 1.00 36.45 N
ATOM 23 N3 G B1026 -55.950 99.162 198.427 1.00 36.57 N
ATOM 24 C4 G B1026 -56.913 99.931 198.973 1.00 36.57 C
ATOM 25 P U B1027 -57.415 100.873 192.393 1.00 52.37 P
ATOM 26 OP1 U B1027 -57.701 99.415 192.492 1.00126.65 O
ATOM 27 OP2 U B1027 -56.139 101.328 191.789 1.00126.82 O
ATOM 28 O5' U B1027 -58.613 101.576 191.611 1.00152.94 O
TER
ATOM 2 P G A1025 -61.343 98.840 194.130 1.00 36.86 P
ATOM 3 OP1 G A1025 -61.711 99.715 192.988 1.00 40.19 O
ATOM 4 OP2 G A1025 -59.914 98.476 194.358 1.00 39.86 O
ATOM 5 O5' G A1025 -61.932 99.496 195.454 1.00 36.38 O
ATOM 6 C5' G A1025 -63.265 100.048 195.484 1.00 36.38 C
ATOM 7 C4' G A1025 -63.632 100.453 196.898 1.00 36.38 C
ATOM 8 O4' G A1025 -63.637 99.262 197.731 1.00 36.38 O
ATOM 9 C3' G A1025 -62.671 101.413 197.594 1.00 36.38 C
ATOM 10 O3' G A1025 -62.921 102.793 197.285 1.00 36.38 O
ATOM 11 C2' G A1025 -62.863 101.064 199.070 1.00 36.38 C
ATOM 12 O2' G A1025 -63.994 101.680 199.658 1.00 36.38 O
ATOM 13 C1' G A1025 -63.066 99.547 198.999 1.00 36.38 C
ATOM 14 N9 G A1025 -61.796 98.825 199.062 1.00 37.43 N
ATOM 15 C8 G A1025 -60.987 98.525 197.989 1.00 37.26 C
ATOM 16 N7 G A1025 -59.886 97.914 198.325 1.00 37.16 N
ATOM 17 C5 G A1025 -59.972 97.788 199.701 1.00 37.14 C
ATOM 18 C6 G A1025 -59.073 97.220 200.596 1.00 37.10 C
ATOM 19 O6 G A1025 -57.977 96.710 200.347 1.00 37.06 O
ATOM 20 N1 G A1025 -59.542 97.286 201.901 1.00 37.30 N
ATOM 21 C2 G A1025 -60.740 97.843 202.285 1.00 37.33 C
ATOM 22 N2 G A1025 -61.025 97.801 203.594 1.00 37.33 N
ATOM 23 N3 G A1025 -61.595 98.397 201.447 1.00 37.30 N
ATOM 24 C4 G A1025 -61.151 98.334 200.176 1.00 37.32 C
ATOM 25 P G A1026 -61.792 103.905 197.603 1.00 63.08 P
ATOM 26 OP1 G A1026 -61.035 103.505 198.823 1.00 76.40 O
ATOM 27 OP2 G A1026 -62.458 105.232 197.558 1.00 76.54 O
ATOM 28 O5' G A1026 -60.760 103.829 196.390 1.00 34.25 O
TER
ATOM 1 O3' G B1025 -62.921 102.793 197.285 1.00 36.38 O
ATOM 2 P G B1026 -61.792 103.905 197.603 1.00 63.08 P
ATOM 3 OP1 G B1026 -61.035 103.505 198.823 1.00 76.40 O
ATOM 4 OP2 G B1026 -62.458 105.232 197.558 1.00 76.54 O
ATOM 5 O5' G B1026 -60.760 103.829 196.390 1.00 34.25 O
ATOM 6 C5' G B1026 -60.493 102.600 195.701 1.00 34.25 C
ATOM 7 C4' G B1026 -59.014 102.458 195.452 1.00 34.25 C
ATOM 8 O4' G B1026 -58.328 102.446 196.733 1.00 34.25 O
ATOM 9 C3' G B1026 -58.610 101.179 194.730 1.00 34.25 C
ATOM 10 O3' G B1026 -57.492 101.480 193.883 1.00 34.25 O
ATOM 11 C2' G B1026 -58.215 100.244 195.879 1.00 34.25 C
ATOM 12 O2' G B1026 -57.292 99.238 195.501 1.00 34.25 O
ATOM 13 C1' G B1026 -57.621 101.227 196.893 1.00 34.25 C
ATOM 14 N9 G B1026 -57.707 100.839 198.304 1.00 36.48 N
ATOM 15 C8 G B1026 -58.563 101.362 199.247 1.00 36.47 C
ATOM 16 N7 G B1026 -58.342 100.910 200.452 1.00 36.40 N
ATOM 17 C5 G B1026 -57.291 100.020 200.297 1.00 36.51 C
ATOM 18 C6 G B1026 -56.603 99.256 201.259 1.00 36.52 C
ATOM 19 O6 G B1026 -56.777 99.220 202.481 1.00 36.45 O
ATOM 20 N1 G B1026 -55.613 98.477 200.677 1.00 36.58 N
ATOM 21 C2 G B1026 -55.320 98.440 199.339 1.00 36.50 C
ATOM 22 N2 G B1026 -54.328 97.611 198.972 1.00 36.45 N
ATOM 23 N3 G B1026 -55.950 99.162 198.427 1.00 36.57 N
ATOM 24 C4 G B1026 -56.913 99.931 198.973 1.00 36.57 C
ATOM 25 P U B1027 -57.415 100.873 192.393 1.00 52.37 P
ATOM 26 OP1 U B1027 -57.701 99.415 192.492 1.00126.65 O
ATOM 27 OP2 U B1027 -56.139 101.328 191.789 1.00126.82 O
ATOM 28 O5' U B1027 -58.613 101.576 191.611 1.00152.94 O
TER
Atoms:
OP1: (-61.711,99.715,192.988)
OP2: (-59.914,98.476,194.358)
C3': (-62.671,101.413,197.594)
C1': (-63.066,99.547,198.999)
C5': (-63.265,100.048,195.484)
O6: (-57.977,96.710,200.347)
O4': (-63.637,99.262,197.731)
C8: (-60.987,98.525,197.989)
C2: (-60.740,97.843,202.285)
C6: (-59.073,97.220,200.596)
C5: (-59.972,97.788,199.701)
C4: (-61.151,98.334,200.176)
P: (-61.343,98.840,194.130)
C4': (-63.632,100.453,196.898)
C2': (-62.863,101.064,199.070)
O2': (-63.994,101.680,199.658)
N1: (-59.542,97.286,201.901)
N2: (-61.025,97.801,203.594)
N3: (-61.595,98.397,201.447)
N7: (-59.886,97.914,198.325)
N9: (-61.796,98.825,199.062)
O5': (-61.932,99.496,195.454)
O3': (-62.921,102.793,197.285)
OP2: (-59.914,98.476,194.358)
C3': (-62.671,101.413,197.594)
C1': (-63.066,99.547,198.999)
C5': (-63.265,100.048,195.484)
O6: (-57.977,96.710,200.347)
O4': (-63.637,99.262,197.731)
C8: (-60.987,98.525,197.989)
C2: (-60.740,97.843,202.285)
C6: (-59.073,97.220,200.596)
C5: (-59.972,97.788,199.701)
C4: (-61.151,98.334,200.176)
P: (-61.343,98.840,194.130)
C4': (-63.632,100.453,196.898)
C2': (-62.863,101.064,199.070)
O2': (-63.994,101.680,199.658)
N1: (-59.542,97.286,201.901)
N2: (-61.025,97.801,203.594)
N3: (-61.595,98.397,201.447)
N7: (-59.886,97.914,198.325)
N9: (-61.796,98.825,199.062)
O5': (-61.932,99.496,195.454)
O3': (-62.921,102.793,197.285)
OP1: (-61.035,103.505,198.823)
OP2: (-62.458,105.232,197.558)
C3': (-58.610,101.179,194.730)
C1': (-57.621,101.227,196.893)
C5': (-60.493,102.600,195.701)
O6: (-56.777,99.220,202.481)
O4': (-58.328,102.446,196.733)
C8: (-58.563,101.362,199.247)
C2: (-55.320,98.440,199.339)
C6: (-56.603,99.256,201.259)
C5: (-57.291,100.020,200.297)
C4: (-56.913,99.931,198.973)
P: (-61.792,103.905,197.603)
C4': (-59.014,102.458,195.452)
C2': (-58.215,100.244,195.879)
O2': (-57.292,99.238,195.501)
N1: (-55.613,98.477,200.677)
N2: (-54.328,97.611,198.972)
N3: (-55.950,99.162,198.427)
N7: (-58.342,100.910,200.452)
N9: (-57.707,100.839,198.304)
O5': (-60.760,103.829,196.390)
O3': (-57.492,101.480,193.883)
OP2: (-62.458,105.232,197.558)
C3': (-58.610,101.179,194.730)
C1': (-57.621,101.227,196.893)
C5': (-60.493,102.600,195.701)
O6: (-56.777,99.220,202.481)
O4': (-58.328,102.446,196.733)
C8: (-58.563,101.362,199.247)
C2: (-55.320,98.440,199.339)
C6: (-56.603,99.256,201.259)
C5: (-57.291,100.020,200.297)
C4: (-56.913,99.931,198.973)
P: (-61.792,103.905,197.603)
C4': (-59.014,102.458,195.452)
C2': (-58.215,100.244,195.879)
O2': (-57.292,99.238,195.501)
N1: (-55.613,98.477,200.677)
N2: (-54.328,97.611,198.972)
N3: (-55.950,99.162,198.427)
N7: (-58.342,100.910,200.452)
N9: (-57.707,100.839,198.304)
O5': (-60.760,103.829,196.390)
O3': (-57.492,101.480,193.883)
Image (generated by PyMOL):