ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A130:A132

Extra

PDB:
ATOM 1 O3' C A 129 -0.869 -56.569 58.948 1.00102.13 O
ATOM 2 P G A 130 0.684 -56.491 58.545 1.00199.79 P
ATOM 3 OP1 G A 130 1.340 -57.650 59.198 1.00 78.03 O
ATOM 4 OP2 G A 130 1.175 -55.117 58.824 1.00 77.76 O
ATOM 5 O5' G A 130 0.685 -56.718 56.967 1.00 97.44 O
ATOM 6 C5' G A 130 -0.326 -56.117 56.150 1.00 97.44 C
ATOM 7 C4' G A 130 0.112 -56.042 54.710 1.00 97.44 C
ATOM 8 O4' G A 130 -0.881 -55.223 54.054 1.00 97.44 O
ATOM 9 C3' G A 130 1.458 -55.357 54.489 1.00 97.44 C
ATOM 10 O3' G A 130 2.445 -56.367 54.245 1.00 97.44 O
ATOM 11 C2' G A 130 1.240 -54.530 53.225 1.00 97.44 C
ATOM 12 O2' G A 130 1.499 -55.254 52.039 1.00 97.44 O
ATOM 13 C1' G A 130 -0.256 -54.210 53.302 1.00 97.44 C
ATOM 14 N9 G A 130 -0.611 -52.936 53.923 1.00 65.97 N
ATOM 15 C8 G A 130 -0.152 -52.444 55.121 1.00 66.11 C
ATOM 16 N7 G A 130 -0.669 -51.285 55.430 1.00 66.23 N
ATOM 17 C5 G A 130 -1.517 -50.991 54.373 1.00 66.22 C
ATOM 18 C6 G A 130 -2.341 -49.870 54.153 1.00 66.08 C
ATOM 19 O6 G A 130 -2.492 -48.873 54.871 1.00 66.00 O
ATOM 20 N1 G A 130 -3.037 -49.978 52.955 1.00 66.01 N
ATOM 21 C2 G A 130 -2.947 -51.028 52.086 1.00 66.02 C
ATOM 22 N2 G A 130 -3.702 -50.947 50.998 1.00 66.01 N
ATOM 23 N3 G A 130 -2.177 -52.078 52.274 1.00 66.05 N
ATOM 24 C4 G A 130 -1.494 -51.997 53.432 1.00 66.16 C
ATOM 25 P G A 131 3.932 -56.224 54.849 1.00168.97 P
ATOM 26 OP1 G A 131 4.670 -57.455 54.467 1.00199.79 O
ATOM 27 OP2 G A 131 3.829 -55.849 56.283 1.00199.79 O
ATOM 28 O5' G A 131 4.588 -55.012 54.049 1.00 59.72 O
TER

ATOM 1 O3' G B 131 5.722 -51.083 55.837 1.00 59.72 O
ATOM 2 P G B 132 4.668 -50.475 56.877 1.00 89.95 P
ATOM 3 OP1 G B 132 5.400 -50.105 58.118 1.00 91.83 O
ATOM 4 OP2 G B 132 3.497 -51.391 56.959 1.00 91.83 O
ATOM 5 O5' G B 132 4.204 -49.127 56.186 1.00 97.91 O
ATOM 6 C5' G B 132 2.983 -48.514 56.577 1.00 97.91 C
ATOM 7 C4' G B 132 2.576 -47.472 55.572 1.00 97.91 C
ATOM 8 O4' G B 132 2.674 -48.008 54.222 1.00 97.91 O
ATOM 9 C3' G B 132 1.144 -46.996 55.762 1.00 97.91 C
ATOM 10 O3' G B 132 1.074 -45.609 55.469 1.00 97.91 O
ATOM 11 C2' G B 132 0.381 -47.789 54.705 1.00 97.91 C
ATOM 12 O2' G B 132 -0.783 -47.125 54.265 1.00 97.91 O
ATOM 13 C1' G B 132 1.418 -47.917 53.582 1.00 97.91 C
ATOM 14 N9 G B 132 1.220 -49.117 52.772 1.00 82.44 N
ATOM 15 C8 G B 132 1.638 -50.391 53.072 1.00 82.44 C
ATOM 16 N7 G B 132 1.257 -51.279 52.194 1.00 82.44 N
ATOM 17 C5 G B 132 0.556 -50.547 51.245 1.00 82.44 C
ATOM 18 C6 G B 132 -0.107 -50.974 50.058 1.00 82.44 C
ATOM 19 O6 G B 132 -0.213 -52.123 49.600 1.00 82.44 O
ATOM 20 N1 G B 132 -0.686 -49.904 49.385 1.00 82.44 N
ATOM 21 C2 G B 132 -0.634 -48.596 49.793 1.00 82.44 C
ATOM 22 N2 G B 132 -1.250 -47.710 48.995 1.00 82.44 N
ATOM 23 N3 G B 132 -0.023 -48.185 50.898 1.00 82.44 N
ATOM 24 C4 G B 132 0.543 -49.207 51.573 1.00 82.44 C
ATOM 25 P A B 133 0.992 -44.531 56.660 1.00 43.89 P
ATOM 26 OP1 A B 133 2.069 -44.847 57.639 1.00161.80 O
ATOM 27 OP2 A B 133 -0.418 -44.449 57.124 1.00161.80 O
ATOM 28 O5' A B 133 1.387 -43.189 55.903 1.00 22.54 O
TER

Atoms:
OP1: (1.340,-57.650,59.198)
OP2: (1.175,-55.117,58.824)
C3': (1.458,-55.357,54.489)
C1': (-0.256,-54.210,53.302)
C5': (-0.326,-56.117,56.150)
O6: (-2.492,-48.873,54.871)
O4': (-0.881,-55.223,54.054)
C8: (-0.152,-52.444,55.121)
C2: (-2.947,-51.028,52.086)
C6: (-2.341,-49.870,54.153)
C5: (-1.517,-50.991,54.373)
C4: (-1.494,-51.997,53.432)
P: (0.684,-56.491,58.545)
C4': (0.112,-56.042,54.710)
C2': (1.240,-54.530,53.225)
O2': (1.499,-55.254,52.039)
N1: (-3.037,-49.978,52.955)
N2: (-3.702,-50.947,50.998)
N3: (-2.177,-52.078,52.274)
N7: (-0.669,-51.285,55.430)
N9: (-0.611,-52.936,53.923)
O5': (0.685,-56.718,56.967)
O3': (2.445,-56.367,54.245)
OP1: (5.400,-50.105,58.118)
OP2: (3.497,-51.391,56.959)
C3': (1.144,-46.996,55.762)
C1': (1.418,-47.917,53.582)
C5': (2.983,-48.514,56.577)
O6: (-0.213,-52.123,49.600)
O4': (2.674,-48.008,54.222)
C8: (1.638,-50.391,53.072)
C2: (-0.634,-48.596,49.793)
C6: (-0.107,-50.974,50.058)
C5: (0.556,-50.547,51.245)
C4: (0.543,-49.207,51.573)
P: (4.668,-50.475,56.877)
C4': (2.576,-47.472,55.572)
C2': (0.381,-47.789,54.705)
O2': (-0.783,-47.125,54.265)
N1: (-0.686,-49.904,49.385)
N2: (-1.250,-47.710,48.995)
N3: (-0.023,-48.185,50.898)
N7: (1.257,-51.279,52.194)
N9: (1.220,-49.117,52.772)
O5': (4.204,-49.127,56.186)
O3': (1.074,-45.609,55.469)
Image (generated by PyMOL):
PyMOL image
show in jmol