ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:B23:B55

Extra

PDB:
ATOM 1 O3' G A 22 -192.674 -49.298 34.983 1.00 70.87 O
ATOM 2 P G A 23 -193.720 -48.089 35.139 1.00 53.86 P
ATOM 3 OP1 G A 23 -195.065 -48.703 35.188 1.00 32.20 O
ATOM 4 OP2 G A 23 -193.441 -47.024 34.148 1.00 32.22 O
ATOM 5 O5' G A 23 -193.389 -47.477 36.564 1.00 74.71 O
ATOM 6 C5' G A 23 -193.566 -48.246 37.759 1.00 74.71 C
ATOM 7 C4' G A 23 -193.074 -47.451 38.935 1.00 74.71 C
ATOM 8 O4' G A 23 -191.645 -47.266 38.767 1.00 74.71 O
ATOM 9 C3' G A 23 -193.696 -46.063 39.034 1.00 74.71 C
ATOM 10 O3' G A 23 -193.908 -45.688 40.389 1.00 74.71 O
ATOM 11 C2' G A 23 -192.658 -45.163 38.369 1.00 74.71 C
ATOM 12 O2' G A 23 -192.647 -43.858 38.914 1.00 74.71 O
ATOM 13 C1' G A 23 -191.341 -45.893 38.652 1.00 74.71 C
ATOM 14 N9 G A 23 -190.351 -45.752 37.581 1.00 81.89 N
ATOM 15 C8 G A 23 -190.583 -45.329 36.292 1.00 81.92 C
ATOM 16 N7 G A 23 -189.507 -45.311 35.556 1.00 81.93 N
ATOM 17 C5 G A 23 -188.500 -45.746 36.404 1.00 81.93 C
ATOM 18 C6 G A 23 -187.119 -45.930 36.162 1.00 81.91 C
ATOM 19 O6 G A 23 -186.490 -45.734 35.123 1.00 81.91 O
ATOM 20 N1 G A 23 -186.457 -46.387 37.292 1.00 81.90 N
ATOM 21 C2 G A 23 -187.046 -46.631 38.503 1.00 81.91 C
ATOM 22 N2 G A 23 -186.230 -47.059 39.477 1.00 81.89 N
ATOM 23 N3 G A 23 -188.336 -46.465 38.745 1.00 81.95 N
ATOM 24 C4 G A 23 -188.999 -46.022 37.658 1.00 81.94 C
ATOM 25 P A A 24 -195.405 -45.451 40.924 1.00108.87 P
ATOM 26 OP1 A A 24 -196.268 -45.018 39.792 1.00134.72 O
ATOM 27 OP2 A A 24 -195.299 -44.592 42.137 1.00134.72 O
ATOM 28 O5' A A 24 -195.877 -46.909 41.365 1.00106.10 O
TER

ATOM 1 O3' U B 54 -192.975 -38.000 34.714 1.00 44.32 O
ATOM 2 P G B 55 -193.323 -39.520 34.308 1.00 96.25 P
ATOM 3 OP1 G B 55 -194.126 -39.426 33.061 1.00 79.37 O
ATOM 4 OP2 G B 55 -193.888 -40.224 35.494 1.00 79.41 O
ATOM 5 O5' G B 55 -191.901 -40.158 33.946 1.00106.39 O
ATOM 6 C5' G B 55 -190.986 -39.451 33.071 1.00106.39 C
ATOM 7 C4' G B 55 -189.598 -40.078 33.072 1.00106.39 C
ATOM 8 O4' G B 55 -189.055 -40.128 34.419 1.00106.39 O
ATOM 9 C3' G B 55 -189.440 -41.472 32.474 1.00106.39 C
ATOM 10 O3' G B 55 -188.242 -41.520 31.706 1.00106.39 O
ATOM 11 C2' G B 55 -189.282 -42.369 33.698 1.00106.39 C
ATOM 12 O2' G B 55 -188.466 -43.492 33.423 1.00106.39 O
ATOM 13 C1' G B 55 -188.602 -41.435 34.704 1.00106.39 C
ATOM 14 N9 G B 55 -188.966 -41.735 36.087 1.00 71.30 N
ATOM 15 C8 G B 55 -190.158 -41.436 36.704 1.00 71.27 C
ATOM 16 N7 G B 55 -190.207 -41.834 37.945 1.00 71.23 N
ATOM 17 C5 G B 55 -188.974 -42.432 38.165 1.00 71.23 C
ATOM 18 C6 G B 55 -188.450 -43.049 39.330 1.00 71.24 C
ATOM 19 O6 G B 55 -188.994 -43.206 40.431 1.00 71.24 O
ATOM 20 N1 G B 55 -187.157 -43.517 39.122 1.00 71.27 N
ATOM 21 C2 G B 55 -186.463 -43.418 37.945 1.00 71.28 C
ATOM 22 N2 G B 55 -185.234 -43.945 37.944 1.00 71.26 N
ATOM 23 N3 G B 55 -186.940 -42.851 36.850 1.00 71.28 N
ATOM 24 C4 G B 55 -188.193 -42.379 37.030 1.00 71.27 C
ATOM 25 P A B 56 -188.258 -41.035 30.174 1.00 96.50 P
ATOM 26 OP1 A B 56 -189.407 -41.685 29.487 1.00 96.12 O
ATOM 27 OP2 A B 56 -186.886 -41.216 29.638 1.00 96.12 O
ATOM 28 O5' A B 56 -188.566 -39.473 30.283 1.00 80.01 O
TER

Atoms:
OP1: (-195.065,-48.703,35.188)
OP2: (-193.441,-47.024,34.148)
C3': (-193.696,-46.063,39.034)
C1': (-191.341,-45.893,38.652)
C5': (-193.566,-48.246,37.759)
O6: (-186.490,-45.734,35.123)
O4': (-191.645,-47.266,38.767)
C8: (-190.583,-45.329,36.292)
C2: (-187.046,-46.631,38.503)
C6: (-187.119,-45.930,36.162)
C5: (-188.500,-45.746,36.404)
C4: (-188.999,-46.022,37.658)
P: (-193.720,-48.089,35.139)
C4': (-193.074,-47.451,38.935)
C2': (-192.658,-45.163,38.369)
O2': (-192.647,-43.858,38.914)
N1: (-186.457,-46.387,37.292)
N2: (-186.230,-47.059,39.477)
N3: (-188.336,-46.465,38.745)
N7: (-189.507,-45.311,35.556)
N9: (-190.351,-45.752,37.581)
O5': (-193.389,-47.477,36.564)
O3': (-193.908,-45.688,40.389)
OP1: (-194.126,-39.426,33.061)
OP2: (-193.888,-40.224,35.494)
C3': (-189.440,-41.472,32.474)
C1': (-188.602,-41.435,34.704)
C5': (-190.986,-39.451,33.071)
O6: (-188.994,-43.206,40.431)
O4': (-189.055,-40.128,34.419)
C8: (-190.158,-41.436,36.704)
C2: (-186.463,-43.418,37.945)
C6: (-188.450,-43.049,39.330)
C5: (-188.974,-42.432,38.165)
C4: (-188.193,-42.379,37.030)
P: (-193.323,-39.520,34.308)
C4': (-189.598,-40.078,33.072)
C2': (-189.282,-42.369,33.698)
O2': (-188.466,-43.492,33.423)
N1: (-187.157,-43.517,39.122)
N2: (-185.234,-43.945,37.944)
N3: (-186.940,-42.851,36.850)
N7: (-190.207,-41.834,37.945)
N9: (-188.966,-41.735,36.087)
O5': (-191.901,-40.158,33.946)
O3': (-188.242,-41.520,31.706)
Image (generated by PyMOL):
PyMOL image
show in jmol