ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CC7:0280:0346

Extra

PDB:
ATOM 1 O3' C A 279 55.335 128.866 -1.716 1.00 71.66 O
ATOM 2 P G A 280 54.795 129.724 -0.474 1.00 71.54 P
ATOM 3 OP1 G A 280 53.804 130.696 -1.008 1.00 70.93 O
ATOM 4 OP2 G A 280 55.976 130.217 0.285 1.00 71.37 O
ATOM 5 O5' G A 280 54.013 128.661 0.418 1.00 71.17 O
ATOM 6 C5' G A 280 52.787 128.064 -0.049 1.00 69.68 C
ATOM 7 C4' G A 280 52.426 126.869 0.801 1.00 68.97 C
ATOM 8 O4' G A 280 53.488 125.877 0.716 1.00 68.89 O
ATOM 9 C3' G A 280 52.291 127.131 2.291 1.00 67.94 C
ATOM 10 O3' G A 280 51.018 127.676 2.627 1.00 69.08 O
ATOM 11 C2' G A 280 52.520 125.744 2.873 1.00 67.29 C
ATOM 12 O2' G A 280 51.395 124.900 2.733 1.00 65.58 O
ATOM 13 C1' G A 280 53.645 125.232 1.971 1.00 67.39 C
ATOM 14 N9 G A 280 54.963 125.581 2.493 1.00 66.49 N
ATOM 15 C8 G A 280 55.651 126.749 2.268 1.00 65.66 C
ATOM 16 N7 G A 280 56.796 126.799 2.890 1.00 65.26 N
ATOM 17 C5 G A 280 56.876 125.587 3.563 1.00 65.67 C
ATOM 18 C6 G A 280 57.892 125.073 4.417 1.00 65.65 C
ATOM 19 O6 G A 280 58.958 125.604 4.754 1.00 65.92 O
ATOM 20 N1 G A 280 57.567 123.808 4.893 1.00 64.61 N
ATOM 21 C2 G A 280 56.418 123.122 4.590 1.00 65.07 C
ATOM 22 N2 G A 280 56.291 121.914 5.153 1.00 65.47 N
ATOM 23 N3 G A 280 55.464 123.587 3.795 1.00 65.59 N
ATOM 24 C4 G A 280 55.756 124.819 3.323 1.00 65.99 C
ATOM 25 P A A 281 50.812 128.404 4.050 1.00 69.61 P
ATOM 26 OP1 A A 281 49.491 129.083 4.026 1.00 69.68 O
ATOM 27 OP2 A A 281 52.035 129.191 4.366 1.00 69.76 O
ATOM 28 O5' A A 281 50.715 127.195 5.081 1.00 68.81 O
TER

ATOM 1 O3' A B 345 56.590 125.245 12.986 1.00 63.53 O
ATOM 2 P G B 346 58.053 125.508 13.600 1.00 63.84 P
ATOM 3 OP1 G B 346 58.463 124.293 14.349 1.00 64.29 O
ATOM 4 OP2 G B 346 58.020 126.823 14.289 1.00 63.48 O
ATOM 5 O5' G B 346 58.997 125.603 12.319 1.00 65.10 O
ATOM 6 C5' G B 346 58.592 126.354 11.160 1.00 67.27 C
ATOM 7 C4' G B 346 58.166 125.418 10.054 1.00 68.65 C
ATOM 8 O4' G B 346 57.402 126.154 9.060 1.00 68.16 O
ATOM 9 C3' G B 346 59.279 124.716 9.284 1.00 69.46 C
ATOM 10 O3' G B 346 58.729 123.463 8.853 1.00 71.97 O
ATOM 11 C2' G B 346 59.491 125.680 8.119 1.00 69.04 C
ATOM 12 O2' G B 346 60.145 125.127 6.997 1.00 70.90 O
ATOM 13 C1' G B 346 58.043 126.052 7.804 1.00 67.26 C
ATOM 14 N9 G B 346 57.828 127.305 7.090 1.00 64.40 N
ATOM 15 C8 G B 346 58.692 128.363 6.959 1.00 64.01 C
ATOM 16 N7 G B 346 58.184 129.358 6.284 1.00 63.37 N
ATOM 17 C5 G B 346 56.911 128.924 5.942 1.00 63.97 C
ATOM 18 C6 G B 346 55.885 129.571 5.204 1.00 64.75 C
ATOM 19 O6 G B 346 55.898 130.698 4.688 1.00 66.98 O
ATOM 20 N1 G B 346 54.752 128.767 5.092 1.00 63.85 N
ATOM 21 C2 G B 346 54.626 127.503 5.620 1.00 64.36 C
ATOM 22 N2 G B 346 53.458 126.880 5.405 1.00 63.68 N
ATOM 23 N3 G B 346 55.575 126.892 6.307 1.00 64.13 N
ATOM 24 C4 G B 346 56.681 127.656 6.428 1.00 64.04 C
ATOM 25 P U B 347 59.629 122.406 8.039 1.00 72.82 P
ATOM 26 OP1 U B 347 60.952 122.297 8.702 1.00 73.05 O
ATOM 27 OP2 U B 347 59.555 122.743 6.595 1.00 73.88 O
ATOM 28 O5' U B 347 58.854 121.028 8.235 1.00 73.40 O
TER

Atoms:
OP1: (53.804,130.696,-1.008)
OP2: (55.976,130.217,0.285)
C3': (52.291,127.131,2.291)
C1': (53.645,125.232,1.971)
C5': (52.787,128.064,-0.049)
O6: (58.958,125.604,4.754)
O4': (53.488,125.877,0.716)
C8: (55.651,126.749,2.268)
C2: (56.418,123.122,4.590)
C6: (57.892,125.073,4.417)
C5: (56.876,125.587,3.563)
C4: (55.756,124.819,3.323)
P: (54.795,129.724,-0.474)
C4': (52.426,126.869,0.801)
C2': (52.520,125.744,2.873)
O2': (51.395,124.900,2.733)
N1: (57.567,123.808,4.893)
N2: (56.291,121.914,5.153)
N3: (55.464,123.587,3.795)
N7: (56.796,126.799,2.890)
N9: (54.963,125.581,2.493)
O5': (54.013,128.661,0.418)
O3': (51.018,127.676,2.627)
OP1: (58.463,124.293,14.349)
OP2: (58.020,126.823,14.289)
C3': (59.279,124.716,9.284)
C1': (58.043,126.052,7.804)
C5': (58.592,126.354,11.160)
O6: (55.898,130.698,4.688)
O4': (57.402,126.154,9.060)
C8: (58.692,128.363,6.959)
C2: (54.626,127.503,5.620)
C6: (55.885,129.571,5.204)
C5: (56.911,128.924,5.942)
C4: (56.681,127.656,6.428)
P: (58.053,125.508,13.600)
C4': (58.166,125.418,10.054)
C2': (59.491,125.680,8.119)
O2': (60.145,125.127,6.997)
N1: (54.752,128.767,5.092)
N2: (53.458,126.880,5.405)
N3: (55.575,126.892,6.307)
N7: (58.184,129.358,6.284)
N9: (57.828,127.305,7.090)
O5': (58.997,125.603,12.319)
O3': (58.729,123.463,8.853)
Image (generated by PyMOL):
PyMOL image
show in jmol