Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2JLT:A5:B5
Extra
PDB:
ATOM 1 O3' G A 4 -4.075 -20.242 -33.583 1.00 25.55 O
ATOM 2 P G A 5 -4.677 -21.545 -32.868 1.00 24.81 P
ATOM 3 OP1 G A 5 -5.610 -22.227 -33.784 1.00 24.09 O
ATOM 4 OP2 G A 5 -5.123 -21.170 -31.514 1.00 24.91 O
ATOM 5 O5' G A 5 -3.415 -22.493 -32.651 1.00 25.32 O
ATOM 6 C5' G A 5 -2.154 -22.220 -33.219 1.00 25.41 C
ATOM 7 C4' G A 5 -1.047 -22.710 -32.302 1.00 25.72 C
ATOM 8 O4' G A 5 -0.497 -21.561 -31.615 1.00 27.09 O
ATOM 9 C3' G A 5 -1.436 -23.693 -31.209 1.00 24.70 C
ATOM 10 O3' G A 5 -1.273 -25.020 -31.671 1.00 23.66 O
ATOM 11 C2' G A 5 -0.415 -23.378 -30.129 1.00 25.58 C
ATOM 12 O2' G A 5 0.789 -24.060 -30.363 1.00 25.75 O
ATOM 13 C1' G A 5 -0.165 -21.889 -30.289 1.00 27.03 C
ATOM 14 N9 G A 5 -0.987 -21.064 -29.415 1.00 28.94 N
ATOM 15 C8 G A 5 -2.362 -21.025 -29.351 1.00 29.89 C
ATOM 16 N7 G A 5 -2.827 -20.190 -28.461 1.00 30.48 N
ATOM 17 C5 G A 5 -1.687 -19.634 -27.902 1.00 30.18 C
ATOM 18 C6 G A 5 -1.564 -18.659 -26.886 1.00 30.31 C
ATOM 19 O6 G A 5 -2.473 -18.087 -26.282 1.00 31.06 O
ATOM 20 N1 G A 5 -0.235 -18.358 -26.598 1.00 30.36 N
ATOM 21 C2 G A 5 0.840 -18.945 -27.234 1.00 30.53 C
ATOM 22 N2 G A 5 2.057 -18.547 -26.837 1.00 31.17 N
ATOM 23 N3 G A 5 0.743 -19.864 -28.193 1.00 30.11 N
ATOM 24 C4 G A 5 -0.548 -20.159 -28.478 1.00 29.82 C
ATOM 25 P U A 6 -1.852 -26.278 -30.863 1.00 23.73 P
ATOM 26 OP1 U A 6 -1.705 -27.445 -31.757 1.00 24.82 O
ATOM 27 OP2 U A 6 -1.253 -26.356 -29.510 1.00 23.12 O
ATOM 28 O5' U A 6 -3.394 -25.901 -30.683 1.00 22.76 O
TER
ATOM 1 O3' C B 4 1.933 -26.508 -28.326 1.00 22.46 O
ATOM 2 P C B 5 2.111 -25.278 -27.324 1.00 22.89 P
ATOM 3 OP1 C B 5 1.233 -25.510 -26.162 1.00 24.18 O
ATOM 4 OP2 C B 5 1.981 -24.019 -28.081 1.00 22.72 O
ATOM 5 O5' C B 5 3.632 -25.361 -26.871 1.00 22.54 O
ATOM 6 C5' C B 5 3.929 -25.224 -25.510 1.00 22.25 C
ATOM 7 C4' C B 5 4.658 -23.946 -25.138 1.00 22.16 C
ATOM 8 O4' C B 5 4.112 -22.760 -25.752 1.00 22.51 O
ATOM 9 C3' C B 5 4.508 -23.704 -23.658 1.00 22.28 C
ATOM 10 O3' C B 5 5.596 -24.310 -23.063 1.00 21.86 O
ATOM 11 C2' C B 5 4.539 -22.203 -23.486 1.00 22.83 C
ATOM 12 O2' C B 5 5.844 -21.687 -23.389 1.00 24.39 O
ATOM 13 C1' C B 5 3.873 -21.754 -24.777 1.00 22.92 C
ATOM 14 N1 C B 5 2.396 -21.545 -24.614 1.00 23.47 N
ATOM 15 C2 C B 5 1.870 -20.759 -23.569 1.00 24.02 C
ATOM 16 O2 C B 5 2.631 -20.226 -22.763 1.00 25.52 O
ATOM 17 N3 C B 5 0.526 -20.600 -23.450 1.00 23.90 N
ATOM 18 C4 C B 5 -0.277 -21.192 -24.337 1.00 24.14 C
ATOM 19 N4 C B 5 -1.588 -21.020 -24.219 1.00 24.42 N
ATOM 20 C5 C B 5 0.222 -21.993 -25.405 1.00 24.09 C
ATOM 21 C6 C B 5 1.547 -22.141 -25.503 1.00 23.90 C
ATOM 22 P U B 6 5.256 -25.553 -22.142 1.00 21.69 P
ATOM 23 OP1 U B 6 6.515 -26.308 -21.934 1.00 22.14 O
ATOM 24 OP2 U B 6 4.087 -26.248 -22.693 1.00 20.90 O
ATOM 25 O5' U B 6 4.780 -24.792 -20.810 1.00 21.84 O
TER
ATOM 2 P G A 5 -4.677 -21.545 -32.868 1.00 24.81 P
ATOM 3 OP1 G A 5 -5.610 -22.227 -33.784 1.00 24.09 O
ATOM 4 OP2 G A 5 -5.123 -21.170 -31.514 1.00 24.91 O
ATOM 5 O5' G A 5 -3.415 -22.493 -32.651 1.00 25.32 O
ATOM 6 C5' G A 5 -2.154 -22.220 -33.219 1.00 25.41 C
ATOM 7 C4' G A 5 -1.047 -22.710 -32.302 1.00 25.72 C
ATOM 8 O4' G A 5 -0.497 -21.561 -31.615 1.00 27.09 O
ATOM 9 C3' G A 5 -1.436 -23.693 -31.209 1.00 24.70 C
ATOM 10 O3' G A 5 -1.273 -25.020 -31.671 1.00 23.66 O
ATOM 11 C2' G A 5 -0.415 -23.378 -30.129 1.00 25.58 C
ATOM 12 O2' G A 5 0.789 -24.060 -30.363 1.00 25.75 O
ATOM 13 C1' G A 5 -0.165 -21.889 -30.289 1.00 27.03 C
ATOM 14 N9 G A 5 -0.987 -21.064 -29.415 1.00 28.94 N
ATOM 15 C8 G A 5 -2.362 -21.025 -29.351 1.00 29.89 C
ATOM 16 N7 G A 5 -2.827 -20.190 -28.461 1.00 30.48 N
ATOM 17 C5 G A 5 -1.687 -19.634 -27.902 1.00 30.18 C
ATOM 18 C6 G A 5 -1.564 -18.659 -26.886 1.00 30.31 C
ATOM 19 O6 G A 5 -2.473 -18.087 -26.282 1.00 31.06 O
ATOM 20 N1 G A 5 -0.235 -18.358 -26.598 1.00 30.36 N
ATOM 21 C2 G A 5 0.840 -18.945 -27.234 1.00 30.53 C
ATOM 22 N2 G A 5 2.057 -18.547 -26.837 1.00 31.17 N
ATOM 23 N3 G A 5 0.743 -19.864 -28.193 1.00 30.11 N
ATOM 24 C4 G A 5 -0.548 -20.159 -28.478 1.00 29.82 C
ATOM 25 P U A 6 -1.852 -26.278 -30.863 1.00 23.73 P
ATOM 26 OP1 U A 6 -1.705 -27.445 -31.757 1.00 24.82 O
ATOM 27 OP2 U A 6 -1.253 -26.356 -29.510 1.00 23.12 O
ATOM 28 O5' U A 6 -3.394 -25.901 -30.683 1.00 22.76 O
TER
ATOM 1 O3' C B 4 1.933 -26.508 -28.326 1.00 22.46 O
ATOM 2 P C B 5 2.111 -25.278 -27.324 1.00 22.89 P
ATOM 3 OP1 C B 5 1.233 -25.510 -26.162 1.00 24.18 O
ATOM 4 OP2 C B 5 1.981 -24.019 -28.081 1.00 22.72 O
ATOM 5 O5' C B 5 3.632 -25.361 -26.871 1.00 22.54 O
ATOM 6 C5' C B 5 3.929 -25.224 -25.510 1.00 22.25 C
ATOM 7 C4' C B 5 4.658 -23.946 -25.138 1.00 22.16 C
ATOM 8 O4' C B 5 4.112 -22.760 -25.752 1.00 22.51 O
ATOM 9 C3' C B 5 4.508 -23.704 -23.658 1.00 22.28 C
ATOM 10 O3' C B 5 5.596 -24.310 -23.063 1.00 21.86 O
ATOM 11 C2' C B 5 4.539 -22.203 -23.486 1.00 22.83 C
ATOM 12 O2' C B 5 5.844 -21.687 -23.389 1.00 24.39 O
ATOM 13 C1' C B 5 3.873 -21.754 -24.777 1.00 22.92 C
ATOM 14 N1 C B 5 2.396 -21.545 -24.614 1.00 23.47 N
ATOM 15 C2 C B 5 1.870 -20.759 -23.569 1.00 24.02 C
ATOM 16 O2 C B 5 2.631 -20.226 -22.763 1.00 25.52 O
ATOM 17 N3 C B 5 0.526 -20.600 -23.450 1.00 23.90 N
ATOM 18 C4 C B 5 -0.277 -21.192 -24.337 1.00 24.14 C
ATOM 19 N4 C B 5 -1.588 -21.020 -24.219 1.00 24.42 N
ATOM 20 C5 C B 5 0.222 -21.993 -25.405 1.00 24.09 C
ATOM 21 C6 C B 5 1.547 -22.141 -25.503 1.00 23.90 C
ATOM 22 P U B 6 5.256 -25.553 -22.142 1.00 21.69 P
ATOM 23 OP1 U B 6 6.515 -26.308 -21.934 1.00 22.14 O
ATOM 24 OP2 U B 6 4.087 -26.248 -22.693 1.00 20.90 O
ATOM 25 O5' U B 6 4.780 -24.792 -20.810 1.00 21.84 O
TER
Atoms:
OP1: (-5.610,-22.227,-33.784)
OP2: (-5.123,-21.170,-31.514)
C3': (-1.436,-23.693,-31.209)
C1': (-0.165,-21.889,-30.289)
C5': (-2.154,-22.220,-33.219)
O6: (-2.473,-18.087,-26.282)
O4': (-0.497,-21.561,-31.615)
C8: (-2.362,-21.025,-29.351)
C2: (0.840,-18.945,-27.234)
C6: (-1.564,-18.659,-26.886)
C5: (-1.687,-19.634,-27.902)
C4: (-0.548,-20.159,-28.478)
P: (-4.677,-21.545,-32.868)
C4': (-1.047,-22.710,-32.302)
C2': (-0.415,-23.378,-30.129)
O2': (0.789,-24.060,-30.363)
N1: (-0.235,-18.358,-26.598)
N2: (2.057,-18.547,-26.837)
N3: (0.743,-19.864,-28.193)
N7: (-2.827,-20.190,-28.461)
N9: (-0.987,-21.064,-29.415)
O5': (-3.415,-22.493,-32.651)
O3': (-1.273,-25.020,-31.671)
OP2: (-5.123,-21.170,-31.514)
C3': (-1.436,-23.693,-31.209)
C1': (-0.165,-21.889,-30.289)
C5': (-2.154,-22.220,-33.219)
O6: (-2.473,-18.087,-26.282)
O4': (-0.497,-21.561,-31.615)
C8: (-2.362,-21.025,-29.351)
C2: (0.840,-18.945,-27.234)
C6: (-1.564,-18.659,-26.886)
C5: (-1.687,-19.634,-27.902)
C4: (-0.548,-20.159,-28.478)
P: (-4.677,-21.545,-32.868)
C4': (-1.047,-22.710,-32.302)
C2': (-0.415,-23.378,-30.129)
O2': (0.789,-24.060,-30.363)
N1: (-0.235,-18.358,-26.598)
N2: (2.057,-18.547,-26.837)
N3: (0.743,-19.864,-28.193)
N7: (-2.827,-20.190,-28.461)
N9: (-0.987,-21.064,-29.415)
O5': (-3.415,-22.493,-32.651)
O3': (-1.273,-25.020,-31.671)
C2: (1.870,-20.759,-23.569)
OP1: (1.233,-25.510,-26.162)
OP2: (1.981,-24.019,-28.081)
C4: (-0.277,-21.192,-24.337)
O5': (3.632,-25.361,-26.871)
C3': (4.508,-23.704,-23.658)
C1': (3.873,-21.754,-24.777)
O4': (4.112,-22.760,-25.752)
C5': (3.929,-25.224,-25.510)
P: (2.111,-25.278,-27.324)
O2: (2.631,-20.226,-22.763)
C4': (4.658,-23.946,-25.138)
C2': (4.539,-22.203,-23.486)
O2': (5.844,-21.687,-23.389)
N1: (2.396,-21.545,-24.614)
N3: (0.526,-20.600,-23.450)
N4: (-1.588,-21.020,-24.219)
C6: (1.547,-22.141,-25.503)
C5: (0.222,-21.993,-25.405)
O3': (5.596,-24.310,-23.063)
OP1: (1.233,-25.510,-26.162)
OP2: (1.981,-24.019,-28.081)
C4: (-0.277,-21.192,-24.337)
O5': (3.632,-25.361,-26.871)
C3': (4.508,-23.704,-23.658)
C1': (3.873,-21.754,-24.777)
O4': (4.112,-22.760,-25.752)
C5': (3.929,-25.224,-25.510)
P: (2.111,-25.278,-27.324)
O2: (2.631,-20.226,-22.763)
C4': (4.658,-23.946,-25.138)
C2': (4.539,-22.203,-23.486)
O2': (5.844,-21.687,-23.389)
N1: (2.396,-21.545,-24.614)
N3: (0.526,-20.600,-23.450)
N4: (-1.588,-21.020,-24.219)
C6: (1.547,-22.141,-25.503)
C5: (0.222,-21.993,-25.405)
O3': (5.596,-24.310,-23.063)
Image (generated by PyMOL):