ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCQ:0552:0580

Extra

PDB:
ATOM 1 O3' C A 551 -10.957 96.134 94.346 1.00 56.61 O
ATOM 2 P G A 552 -10.783 94.995 95.460 1.00 57.91 P
ATOM 3 OP1 G A 552 -10.718 93.676 94.778 1.00 57.41 O
ATOM 4 OP2 G A 552 -11.815 95.235 96.496 1.00 59.07 O
ATOM 5 O5' G A 552 -9.365 95.303 96.113 1.00 57.97 O
ATOM 6 C5' G A 552 -8.192 95.419 95.299 1.00 57.71 C
ATOM 7 C4' G A 552 -7.085 96.091 96.071 1.00 58.31 C
ATOM 8 O4' G A 552 -7.501 97.424 96.461 1.00 59.39 O
ATOM 9 C3' G A 552 -6.686 95.435 97.378 1.00 57.05 C
ATOM 10 O3' G A 552 -5.798 94.352 97.131 1.00 56.00 O
ATOM 11 C2' G A 552 -6.012 96.585 98.117 1.00 58.80 C
ATOM 12 O2' G A 552 -4.677 96.796 97.708 1.00 58.37 O
ATOM 13 C1' G A 552 -6.870 97.778 97.678 1.00 60.98 C
ATOM 14 N9 G A 552 -7.902 98.149 98.639 1.00 64.77 N
ATOM 15 C8 G A 552 -9.102 97.513 98.846 1.00 66.45 C
ATOM 16 N7 G A 552 -9.811 98.056 99.797 1.00 68.24 N
ATOM 17 C5 G A 552 -9.038 99.122 100.238 1.00 68.28 C
ATOM 18 C6 G A 552 -9.288 100.077 101.258 1.00 69.79 C
ATOM 19 O6 G A 552 -10.279 100.181 101.998 1.00 71.62 O
ATOM 20 N1 G A 552 -8.237 100.977 101.381 1.00 70.23 N
ATOM 21 C2 G A 552 -7.093 100.961 100.629 1.00 69.37 C
ATOM 22 N2 G A 552 -6.186 101.905 100.929 1.00 69.49 N
ATOM 23 N3 G A 552 -6.852 100.084 99.665 1.00 68.05 N
ATOM 24 C4 G A 552 -7.859 99.197 99.528 1.00 66.59 C
ATOM 25 P A A 553 -5.166 93.532 98.361 1.00 58.33 P
ATOM 26 OP1 A A 553 -5.648 92.130 98.259 1.00 56.93 O
ATOM 27 OP2 A A 553 -5.370 94.293 99.621 1.00 56.08 O
ATOM 28 O5' A A 553 -3.610 93.494 98.031 1.00 55.78 O
TER

ATOM 1 O3' A B 579 -6.268 103.266 106.340 1.00 63.67 O
ATOM 2 P G B 580 -6.207 103.689 104.790 1.00 64.82 P
ATOM 3 OP1 G B 580 -5.916 105.148 104.755 1.00 64.32 O
ATOM 4 OP2 G B 580 -7.412 103.159 104.093 1.00 63.66 O
ATOM 5 O5' G B 580 -4.957 102.888 104.209 1.00 64.18 O
ATOM 6 C5' G B 580 -3.604 103.257 104.538 1.00 60.63 C
ATOM 7 C4' G B 580 -2.640 102.280 103.908 1.00 59.12 C
ATOM 8 O4' G B 580 -2.903 100.955 104.433 1.00 59.46 O
ATOM 9 C3' G B 580 -2.770 102.117 102.403 1.00 58.36 C
ATOM 10 O3' G B 580 -1.991 103.082 101.724 1.00 57.33 O
ATOM 11 C2' G B 580 -2.199 100.726 102.173 1.00 59.40 C
ATOM 12 O2' G B 580 -0.787 100.707 102.149 1.00 60.47 O
ATOM 13 C1' G B 580 -2.693 99.991 103.419 1.00 59.97 C
ATOM 14 N9 G B 580 -3.953 99.303 103.180 1.00 61.77 N
ATOM 15 C8 G B 580 -5.222 99.759 103.451 1.00 62.84 C
ATOM 16 N7 G B 580 -6.152 98.916 103.097 1.00 63.58 N
ATOM 17 C5 G B 580 -5.453 97.842 102.565 1.00 62.84 C
ATOM 18 C6 G B 580 -5.920 96.636 102.014 1.00 63.09 C
ATOM 19 O6 G B 580 -7.085 96.257 101.872 1.00 66.47 O
ATOM 20 N1 G B 580 -4.871 95.824 101.601 1.00 63.22 N
ATOM 21 C2 G B 580 -3.541 96.137 101.707 1.00 63.86 C
ATOM 22 N2 G B 580 -2.675 95.216 101.271 1.00 65.08 N
ATOM 23 N3 G B 580 -3.092 97.267 102.210 1.00 63.52 N
ATOM 24 C4 G B 580 -4.096 98.066 102.618 1.00 62.68 C
ATOM 25 P A B 581 -2.658 104.454 101.251 1.00 57.78 P
ATOM 26 OP1 A B 581 -2.638 105.366 102.423 1.00 55.91 O
ATOM 27 OP2 A B 581 -3.942 104.155 100.568 1.00 58.00 O
ATOM 28 O5' A B 581 -1.647 104.999 100.151 1.00 58.02 O
TER

Atoms:
OP1: (-10.718,93.676,94.778)
OP2: (-11.815,95.235,96.496)
C3': (-6.686,95.435,97.378)
C1': (-6.870,97.778,97.678)
C5': (-8.192,95.419,95.299)
O6: (-10.279,100.181,101.998)
O4': (-7.501,97.424,96.461)
C8: (-9.102,97.513,98.846)
C2: (-7.093,100.961,100.629)
C6: (-9.288,100.077,101.258)
C5: (-9.038,99.122,100.238)
C4: (-7.859,99.197,99.528)
P: (-10.783,94.995,95.460)
C4': (-7.085,96.091,96.071)
C2': (-6.012,96.585,98.117)
O2': (-4.677,96.796,97.708)
N1: (-8.237,100.977,101.381)
N2: (-6.186,101.905,100.929)
N3: (-6.852,100.084,99.665)
N7: (-9.811,98.056,99.797)
N9: (-7.902,98.149,98.639)
O5': (-9.365,95.303,96.113)
O3': (-5.798,94.352,97.131)
OP1: (-5.916,105.148,104.755)
OP2: (-7.412,103.159,104.093)
C3': (-2.770,102.117,102.403)
C1': (-2.693,99.991,103.419)
C5': (-3.604,103.257,104.538)
O6: (-7.085,96.257,101.872)
O4': (-2.903,100.955,104.433)
C8: (-5.222,99.759,103.451)
C2: (-3.541,96.137,101.707)
C6: (-5.920,96.636,102.014)
C5: (-5.453,97.842,102.565)
C4: (-4.096,98.066,102.618)
P: (-6.207,103.689,104.790)
C4': (-2.640,102.280,103.908)
C2': (-2.199,100.726,102.173)
O2': (-0.787,100.707,102.149)
N1: (-4.871,95.824,101.601)
N2: (-2.675,95.216,101.271)
N3: (-3.092,97.267,102.210)
N7: (-6.152,98.916,103.097)
N9: (-3.953,99.303,103.180)
O5': (-4.957,102.888,104.209)
O3': (-1.991,103.082,101.724)
Image (generated by PyMOL):
PyMOL image
show in jmol