ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCS:0280:0346

Extra

PDB:
ATOM 1 O3' C A 279 55.345 128.398 -1.803 1.00 79.76 O
ATOM 2 P G A 280 54.757 129.226 -0.561 1.00 78.76 P
ATOM 3 OP1 G A 280 53.763 130.192 -1.084 1.00 79.35 O
ATOM 4 OP2 G A 280 55.905 129.715 0.240 1.00 79.44 O
ATOM 5 O5' G A 280 53.963 128.137 0.285 1.00 78.70 O
ATOM 6 C5' G A 280 52.791 127.504 -0.251 1.00 77.21 C
ATOM 7 C4' G A 280 52.425 126.297 0.579 1.00 77.12 C
ATOM 8 O4' G A 280 53.475 125.296 0.492 1.00 76.87 O
ATOM 9 C3' G A 280 52.281 126.540 2.070 1.00 75.89 C
ATOM 10 O3' G A 280 51.016 127.098 2.395 1.00 76.41 O
ATOM 11 C2' G A 280 52.465 125.139 2.628 1.00 75.18 C
ATOM 12 O2' G A 280 51.324 124.329 2.441 1.00 74.20 O
ATOM 13 C1' G A 280 53.592 124.623 1.735 1.00 74.53 C
ATOM 14 N9 G A 280 54.895 124.948 2.298 1.00 73.39 N
ATOM 15 C8 G A 280 55.642 126.079 2.073 1.00 72.75 C
ATOM 16 N7 G A 280 56.771 126.085 2.728 1.00 73.26 N
ATOM 17 C5 G A 280 56.767 124.885 3.427 1.00 73.28 C
ATOM 18 C6 G A 280 57.729 124.330 4.309 1.00 72.80 C
ATOM 19 O6 G A 280 58.813 124.800 4.657 1.00 72.91 O
ATOM 20 N1 G A 280 57.320 123.095 4.799 1.00 72.52 N
ATOM 21 C2 G A 280 56.139 122.472 4.479 1.00 72.81 C
ATOM 22 N2 G A 280 55.918 121.285 5.055 1.00 73.65 N
ATOM 23 N3 G A 280 55.238 122.975 3.657 1.00 72.44 N
ATOM 24 C4 G A 280 55.614 124.175 3.171 1.00 73.13 C
ATOM 25 P A A 281 50.786 127.750 3.843 1.00 76.18 P
ATOM 26 OP1 A A 281 49.464 128.424 3.827 1.00 74.47 O
ATOM 27 OP2 A A 281 52.004 128.527 4.194 1.00 75.70 O
ATOM 28 O5' A A 281 50.695 126.484 4.803 1.00 74.10 O
TER

ATOM 1 O3' A B 345 56.382 124.614 12.729 1.00 69.71 O
ATOM 2 P G B 346 57.798 124.873 13.439 1.00 71.09 P
ATOM 3 OP1 G B 346 58.216 123.617 14.098 1.00 70.83 O
ATOM 4 OP2 G B 346 57.682 126.122 14.232 1.00 69.34 O
ATOM 5 O5' G B 346 58.792 125.100 12.218 1.00 73.21 O
ATOM 6 C5' G B 346 58.362 125.826 11.056 1.00 77.34 C
ATOM 7 C4' G B 346 58.008 124.870 9.940 1.00 79.65 C
ATOM 8 O4' G B 346 57.272 125.588 8.913 1.00 80.53 O
ATOM 9 C3' G B 346 59.172 124.195 9.217 1.00 80.34 C
ATOM 10 O3' G B 346 58.669 122.940 8.736 1.00 82.25 O
ATOM 11 C2' G B 346 59.424 125.176 8.079 1.00 80.34 C
ATOM 12 O2' G B 346 60.137 124.641 6.989 1.00 80.79 O
ATOM 13 C1' G B 346 57.987 125.531 7.697 1.00 80.66 C
ATOM 14 N9 G B 346 57.810 126.806 7.017 1.00 80.87 N
ATOM 15 C8 G B 346 58.704 127.844 6.931 1.00 81.81 C
ATOM 16 N7 G B 346 58.246 128.858 6.248 1.00 82.12 N
ATOM 17 C5 G B 346 56.974 128.462 5.864 1.00 82.18 C
ATOM 18 C6 G B 346 55.994 129.143 5.104 1.00 83.48 C
ATOM 19 O6 G B 346 56.056 130.278 4.600 1.00 83.68 O
ATOM 20 N1 G B 346 54.843 128.370 4.949 1.00 84.27 N
ATOM 21 C2 G B 346 54.663 127.105 5.464 1.00 83.01 C
ATOM 22 N2 G B 346 53.486 126.519 5.204 1.00 83.18 N
ATOM 23 N3 G B 346 55.571 126.465 6.178 1.00 81.04 N
ATOM 24 C4 G B 346 56.693 127.196 6.335 1.00 81.26 C
ATOM 25 P U B 347 59.620 121.925 7.924 1.00 83.25 P
ATOM 26 OP1 U B 347 60.951 121.871 8.584 1.00 82.85 O
ATOM 27 OP2 U B 347 59.531 122.263 6.477 1.00 84.18 O
ATOM 28 O5' U B 347 58.898 120.519 8.117 1.00 80.85 O
TER

Atoms:
OP1: (53.763,130.192,-1.084)
OP2: (55.905,129.715,0.240)
C3': (52.281,126.540,2.070)
C1': (53.592,124.623,1.735)
C5': (52.791,127.504,-0.251)
O6: (58.813,124.800,4.657)
O4': (53.475,125.296,0.492)
C8: (55.642,126.079,2.073)
C2: (56.139,122.472,4.479)
C6: (57.729,124.330,4.309)
C5: (56.767,124.885,3.427)
C4: (55.614,124.175,3.171)
P: (54.757,129.226,-0.561)
C4': (52.425,126.297,0.579)
C2': (52.465,125.139,2.628)
O2': (51.324,124.329,2.441)
N1: (57.320,123.095,4.799)
N2: (55.918,121.285,5.055)
N3: (55.238,122.975,3.657)
N7: (56.771,126.085,2.728)
N9: (54.895,124.948,2.298)
O5': (53.963,128.137,0.285)
O3': (51.016,127.098,2.395)
OP1: (58.216,123.617,14.098)
OP2: (57.682,126.122,14.232)
C3': (59.172,124.195,9.217)
C1': (57.987,125.531,7.697)
C5': (58.362,125.826,11.056)
O6: (56.056,130.278,4.600)
O4': (57.272,125.588,8.913)
C8: (58.704,127.844,6.931)
C2: (54.663,127.105,5.464)
C6: (55.994,129.143,5.104)
C5: (56.974,128.462,5.864)
C4: (56.693,127.196,6.335)
P: (57.798,124.873,13.439)
C4': (58.008,124.870,9.940)
C2': (59.424,125.176,8.079)
O2': (60.137,124.641,6.989)
N1: (54.843,128.370,4.949)
N2: (53.486,126.519,5.204)
N3: (55.571,126.465,6.178)
N7: (58.246,128.858,6.248)
N9: (57.810,126.806,7.017)
O5': (58.792,125.100,12.218)
O3': (58.669,122.940,8.736)
Image (generated by PyMOL):
PyMOL image
show in jmol