ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCU:0280:0346

Extra

PDB:
ATOM 1 O3' C A 279 55.143 128.525 -1.808 1.00 68.24 O
ATOM 2 P G A 280 54.543 129.338 -0.565 1.00 67.33 P
ATOM 3 OP1 G A 280 53.562 130.313 -1.099 1.00 66.76 O
ATOM 4 OP2 G A 280 55.692 129.820 0.241 1.00 68.07 O
ATOM 5 O5' G A 280 53.743 128.238 0.265 1.00 67.25 O
ATOM 6 C5' G A 280 52.540 127.647 -0.260 1.00 67.40 C
ATOM 7 C4' G A 280 52.166 126.420 0.541 1.00 68.21 C
ATOM 8 O4' G A 280 53.231 125.435 0.443 1.00 68.41 O
ATOM 9 C3' G A 280 52.008 126.635 2.037 1.00 67.96 C
ATOM 10 O3' G A 280 50.730 127.154 2.373 1.00 69.42 O
ATOM 11 C2' G A 280 52.237 125.235 2.582 1.00 67.19 C
ATOM 12 O2' G A 280 51.122 124.389 2.394 1.00 66.11 O
ATOM 13 C1' G A 280 53.379 124.763 1.684 1.00 66.74 C
ATOM 14 N9 G A 280 54.680 125.127 2.233 1.00 65.92 N
ATOM 15 C8 G A 280 55.381 126.289 2.005 1.00 65.48 C
ATOM 16 N7 G A 280 56.525 126.329 2.634 1.00 65.44 N
ATOM 17 C5 G A 280 56.582 125.120 3.317 1.00 65.83 C
ATOM 18 C6 G A 280 57.587 124.592 4.170 1.00 65.40 C
ATOM 19 O6 G A 280 58.665 125.100 4.494 1.00 66.80 O
ATOM 20 N1 G A 280 57.237 123.338 4.659 1.00 63.92 N
ATOM 21 C2 G A 280 56.071 122.675 4.365 1.00 64.05 C
ATOM 22 N2 G A 280 55.915 121.476 4.934 1.00 64.69 N
ATOM 23 N3 G A 280 55.127 123.152 3.571 1.00 64.42 N
ATOM 24 C4 G A 280 55.447 124.370 3.085 1.00 65.75 C
ATOM 25 P A A 281 50.546 127.976 3.741 1.00 70.40 P
ATOM 26 OP1 A A 281 49.222 128.651 3.683 1.00 69.71 O
ATOM 27 OP2 A A 281 51.774 128.785 3.965 1.00 69.43 O
ATOM 28 O5' A A 281 50.473 126.839 4.854 1.00 69.13 O
TER

ATOM 1 O3' A B 345 56.370 124.761 12.619 1.00 64.94 O
ATOM 2 P G B 346 57.762 125.094 13.347 1.00 65.37 P
ATOM 3 OP1 G B 346 58.137 123.921 14.172 1.00 66.23 O
ATOM 4 OP2 G B 346 57.617 126.425 13.982 1.00 66.44 O
ATOM 5 O5' G B 346 58.806 125.188 12.147 1.00 66.21 O
ATOM 6 C5' G B 346 58.477 125.918 10.951 1.00 68.44 C
ATOM 7 C4' G B 346 58.035 124.967 9.859 1.00 69.32 C
ATOM 8 O4' G B 346 57.259 125.699 8.872 1.00 68.77 O
ATOM 9 C3' G B 346 59.131 124.251 9.076 1.00 68.85 C
ATOM 10 O3' G B 346 58.571 123.002 8.644 1.00 69.42 O
ATOM 11 C2' G B 346 59.331 125.207 7.904 1.00 68.40 C
ATOM 12 O2' G B 346 59.961 124.647 6.774 1.00 68.67 O
ATOM 13 C1' G B 346 57.880 125.580 7.610 1.00 68.00 C
ATOM 14 N9 G B 346 57.663 126.825 6.890 1.00 66.83 N
ATOM 15 C8 G B 346 58.531 127.877 6.739 1.00 67.09 C
ATOM 16 N7 G B 346 58.026 128.859 6.044 1.00 67.03 N
ATOM 17 C5 G B 346 56.751 128.423 5.716 1.00 67.24 C
ATOM 18 C6 G B 346 55.728 129.056 4.971 1.00 68.67 C
ATOM 19 O6 G B 346 55.745 130.170 4.428 1.00 70.71 O
ATOM 20 N1 G B 346 54.591 128.257 4.884 1.00 68.55 N
ATOM 21 C2 G B 346 54.457 127.010 5.444 1.00 67.32 C
ATOM 22 N2 G B 346 53.280 126.399 5.254 1.00 67.67 N
ATOM 23 N3 G B 346 55.404 126.410 6.139 1.00 66.20 N
ATOM 24 C4 G B 346 56.515 127.169 6.233 1.00 66.80 C
ATOM 25 P U B 347 59.459 121.949 7.811 1.00 69.95 P
ATOM 26 OP1 U B 347 60.793 121.840 8.453 1.00 69.22 O
ATOM 27 OP2 U B 347 59.359 122.288 6.364 1.00 70.43 O
ATOM 28 O5' U B 347 58.696 120.566 8.012 1.00 69.50 O
TER

Atoms:
OP1: (53.562,130.313,-1.099)
OP2: (55.692,129.820,0.241)
C3': (52.008,126.635,2.037)
C1': (53.379,124.763,1.684)
C5': (52.540,127.647,-0.260)
O6: (58.665,125.100,4.494)
O4': (53.231,125.435,0.443)
C8: (55.381,126.289,2.005)
C2: (56.071,122.675,4.365)
C6: (57.587,124.592,4.170)
C5: (56.582,125.120,3.317)
C4: (55.447,124.370,3.085)
P: (54.543,129.338,-0.565)
C4': (52.166,126.420,0.541)
C2': (52.237,125.235,2.582)
O2': (51.122,124.389,2.394)
N1: (57.237,123.338,4.659)
N2: (55.915,121.476,4.934)
N3: (55.127,123.152,3.571)
N7: (56.525,126.329,2.634)
N9: (54.680,125.127,2.233)
O5': (53.743,128.238,0.265)
O3': (50.730,127.154,2.373)
OP1: (58.137,123.921,14.172)
OP2: (57.617,126.425,13.982)
C3': (59.131,124.251,9.076)
C1': (57.880,125.580,7.610)
C5': (58.477,125.918,10.951)
O6: (55.745,130.170,4.428)
O4': (57.259,125.699,8.872)
C8: (58.531,127.877,6.739)
C2: (54.457,127.010,5.444)
C6: (55.728,129.056,4.971)
C5: (56.751,128.423,5.716)
C4: (56.515,127.169,6.233)
P: (57.762,125.094,13.347)
C4': (58.035,124.967,9.859)
C2': (59.331,125.207,7.904)
O2': (59.961,124.647,6.774)
N1: (54.591,128.257,4.884)
N2: (53.280,126.399,5.254)
N3: (55.404,126.410,6.139)
N7: (58.026,128.859,6.044)
N9: (57.663,126.825,6.890)
O5': (58.806,125.188,12.147)
O3': (58.571,123.002,8.644)
Image (generated by PyMOL):
PyMOL image
show in jmol