Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0X:A23:A60
Extra
PDB:
ATOM 1 O3' A A 22 -3.264 15.479 2.026 1.00 44.88 O
ATOM 2 P G A 23 -4.448 14.990 2.986 1.00 52.08 P
ATOM 3 OP1 G A 23 -5.521 16.007 2.940 1.00 48.05 O
ATOM 4 OP2 G A 23 -3.882 14.588 4.294 1.00 49.90 O
ATOM 5 O5' G A 23 -4.917 13.649 2.255 1.00 47.93 O
ATOM 6 C5' G A 23 -6.028 13.631 1.372 1.00 52.58 C
ATOM 7 C4' G A 23 -5.738 14.308 0.047 1.00 46.97 C
ATOM 8 O4' G A 23 -4.719 13.584 -0.689 1.00 45.50 O
ATOM 9 C3' G A 23 -6.951 14.365 -0.875 1.00 51.43 C
ATOM 10 O3' G A 23 -6.944 15.579 -1.593 1.00 52.61 O
ATOM 11 C2' G A 23 -6.712 13.197 -1.814 1.00 46.92 C
ATOM 12 O2' G A 23 -7.352 13.378 -3.058 1.00 46.17 O
ATOM 13 C1' G A 23 -5.207 13.308 -1.987 1.00 48.14 C
ATOM 14 N9 G A 23 -4.632 12.067 -2.483 1.00 51.66 N
ATOM 15 C8 G A 23 -4.983 10.802 -2.079 1.00 53.46 C
ATOM 16 N7 G A 23 -4.318 9.862 -2.688 1.00 58.38 N
ATOM 17 C5 G A 23 -3.474 10.546 -3.553 1.00 53.40 C
ATOM 18 C6 G A 23 -2.520 10.045 -4.467 1.00 53.10 C
ATOM 19 O6 G A 23 -2.224 8.865 -4.699 1.00 57.39 O
ATOM 20 N1 G A 23 -1.876 11.070 -5.151 1.00 53.09 N
ATOM 21 C2 G A 23 -2.122 12.409 -4.973 1.00 51.34 C
ATOM 22 N2 G A 23 -1.390 13.236 -5.735 1.00 51.70 N
ATOM 23 N3 G A 23 -3.014 12.894 -4.116 1.00 48.27 N
ATOM 24 C4 G A 23 -3.654 11.907 -3.442 1.00 50.41 C
ATOM 25 P U A 24 -8.260 16.067 -2.347 1.00 47.13 P
ATOM 26 OP1 U A 24 -9.425 15.632 -1.546 1.00 48.68 O
ATOM 27 OP2 U A 24 -8.134 15.681 -3.772 1.00 40.79 O
ATOM 28 O5' U A 24 -8.125 17.658 -2.243 1.00 52.45 O
TER
ATOM 1 O3' U B 59 -3.333 9.213 -11.808 1.00 50.62 O
ATOM 2 P G B 60 -2.144 9.125 -10.743 1.00 53.57 P
ATOM 3 OP1 G B 60 -0.953 8.615 -11.457 1.00 45.25 O
ATOM 4 OP2 G B 60 -2.659 8.442 -9.532 1.00 42.08 O
ATOM 5 O5' G B 60 -1.872 10.653 -10.360 1.00 53.16 O
ATOM 6 C5' G B 60 -1.413 11.597 -11.319 1.00 49.71 C
ATOM 7 C4' G B 60 -1.501 12.996 -10.736 1.00 50.21 C
ATOM 8 O4' G B 60 -2.893 13.381 -10.582 1.00 48.98 O
ATOM 9 C3' G B 60 -0.932 13.147 -9.333 1.00 49.87 C
ATOM 10 O3' G B 60 0.480 13.310 -9.365 1.00 47.88 O
ATOM 11 C2' G B 60 -1.632 14.428 -8.908 1.00 50.23 C
ATOM 12 O2' G B 60 -1.092 15.551 -9.574 1.00 54.54 O
ATOM 13 C1' G B 60 -3.047 14.154 -9.404 1.00 47.99 C
ATOM 14 N9 G B 60 -3.836 13.399 -8.439 1.00 46.41 N
ATOM 15 C8 G B 60 -3.880 12.032 -8.319 1.00 52.40 C
ATOM 16 N7 G B 60 -4.662 11.615 -7.366 1.00 52.69 N
ATOM 17 C5 G B 60 -5.172 12.781 -6.814 1.00 48.48 C
ATOM 18 C6 G B 60 -6.078 12.948 -5.740 1.00 49.87 C
ATOM 19 O6 G B 60 -6.618 12.071 -5.054 1.00 53.70 O
ATOM 20 N1 G B 60 -6.344 14.291 -5.489 1.00 46.59 N
ATOM 21 C2 G B 60 -5.795 15.335 -6.194 1.00 47.20 C
ATOM 22 N2 G B 60 -6.174 16.558 -5.801 1.00 44.29 N
ATOM 23 N3 G B 60 -4.941 15.193 -7.204 1.00 45.98 N
ATOM 24 C4 G B 60 -4.674 13.889 -7.461 1.00 46.11 C
ATOM 25 P A B 61 1.346 12.852 -8.100 1.00 53.82 P
ATOM 26 OP1 A B 61 2.745 12.742 -8.569 1.00 46.36 O
ATOM 27 OP2 A B 61 0.683 11.691 -7.471 1.00 51.90 O
ATOM 28 O5' A B 61 1.216 14.077 -7.075 1.00 54.22 O
TER
ATOM 2 P G A 23 -4.448 14.990 2.986 1.00 52.08 P
ATOM 3 OP1 G A 23 -5.521 16.007 2.940 1.00 48.05 O
ATOM 4 OP2 G A 23 -3.882 14.588 4.294 1.00 49.90 O
ATOM 5 O5' G A 23 -4.917 13.649 2.255 1.00 47.93 O
ATOM 6 C5' G A 23 -6.028 13.631 1.372 1.00 52.58 C
ATOM 7 C4' G A 23 -5.738 14.308 0.047 1.00 46.97 C
ATOM 8 O4' G A 23 -4.719 13.584 -0.689 1.00 45.50 O
ATOM 9 C3' G A 23 -6.951 14.365 -0.875 1.00 51.43 C
ATOM 10 O3' G A 23 -6.944 15.579 -1.593 1.00 52.61 O
ATOM 11 C2' G A 23 -6.712 13.197 -1.814 1.00 46.92 C
ATOM 12 O2' G A 23 -7.352 13.378 -3.058 1.00 46.17 O
ATOM 13 C1' G A 23 -5.207 13.308 -1.987 1.00 48.14 C
ATOM 14 N9 G A 23 -4.632 12.067 -2.483 1.00 51.66 N
ATOM 15 C8 G A 23 -4.983 10.802 -2.079 1.00 53.46 C
ATOM 16 N7 G A 23 -4.318 9.862 -2.688 1.00 58.38 N
ATOM 17 C5 G A 23 -3.474 10.546 -3.553 1.00 53.40 C
ATOM 18 C6 G A 23 -2.520 10.045 -4.467 1.00 53.10 C
ATOM 19 O6 G A 23 -2.224 8.865 -4.699 1.00 57.39 O
ATOM 20 N1 G A 23 -1.876 11.070 -5.151 1.00 53.09 N
ATOM 21 C2 G A 23 -2.122 12.409 -4.973 1.00 51.34 C
ATOM 22 N2 G A 23 -1.390 13.236 -5.735 1.00 51.70 N
ATOM 23 N3 G A 23 -3.014 12.894 -4.116 1.00 48.27 N
ATOM 24 C4 G A 23 -3.654 11.907 -3.442 1.00 50.41 C
ATOM 25 P U A 24 -8.260 16.067 -2.347 1.00 47.13 P
ATOM 26 OP1 U A 24 -9.425 15.632 -1.546 1.00 48.68 O
ATOM 27 OP2 U A 24 -8.134 15.681 -3.772 1.00 40.79 O
ATOM 28 O5' U A 24 -8.125 17.658 -2.243 1.00 52.45 O
TER
ATOM 1 O3' U B 59 -3.333 9.213 -11.808 1.00 50.62 O
ATOM 2 P G B 60 -2.144 9.125 -10.743 1.00 53.57 P
ATOM 3 OP1 G B 60 -0.953 8.615 -11.457 1.00 45.25 O
ATOM 4 OP2 G B 60 -2.659 8.442 -9.532 1.00 42.08 O
ATOM 5 O5' G B 60 -1.872 10.653 -10.360 1.00 53.16 O
ATOM 6 C5' G B 60 -1.413 11.597 -11.319 1.00 49.71 C
ATOM 7 C4' G B 60 -1.501 12.996 -10.736 1.00 50.21 C
ATOM 8 O4' G B 60 -2.893 13.381 -10.582 1.00 48.98 O
ATOM 9 C3' G B 60 -0.932 13.147 -9.333 1.00 49.87 C
ATOM 10 O3' G B 60 0.480 13.310 -9.365 1.00 47.88 O
ATOM 11 C2' G B 60 -1.632 14.428 -8.908 1.00 50.23 C
ATOM 12 O2' G B 60 -1.092 15.551 -9.574 1.00 54.54 O
ATOM 13 C1' G B 60 -3.047 14.154 -9.404 1.00 47.99 C
ATOM 14 N9 G B 60 -3.836 13.399 -8.439 1.00 46.41 N
ATOM 15 C8 G B 60 -3.880 12.032 -8.319 1.00 52.40 C
ATOM 16 N7 G B 60 -4.662 11.615 -7.366 1.00 52.69 N
ATOM 17 C5 G B 60 -5.172 12.781 -6.814 1.00 48.48 C
ATOM 18 C6 G B 60 -6.078 12.948 -5.740 1.00 49.87 C
ATOM 19 O6 G B 60 -6.618 12.071 -5.054 1.00 53.70 O
ATOM 20 N1 G B 60 -6.344 14.291 -5.489 1.00 46.59 N
ATOM 21 C2 G B 60 -5.795 15.335 -6.194 1.00 47.20 C
ATOM 22 N2 G B 60 -6.174 16.558 -5.801 1.00 44.29 N
ATOM 23 N3 G B 60 -4.941 15.193 -7.204 1.00 45.98 N
ATOM 24 C4 G B 60 -4.674 13.889 -7.461 1.00 46.11 C
ATOM 25 P A B 61 1.346 12.852 -8.100 1.00 53.82 P
ATOM 26 OP1 A B 61 2.745 12.742 -8.569 1.00 46.36 O
ATOM 27 OP2 A B 61 0.683 11.691 -7.471 1.00 51.90 O
ATOM 28 O5' A B 61 1.216 14.077 -7.075 1.00 54.22 O
TER
Atoms:
OP1: (-5.521,16.007,2.940)
OP2: (-3.882,14.588,4.294)
C3': (-6.951,14.365,-0.875)
C1': (-5.207,13.308,-1.987)
C5': (-6.028,13.631,1.372)
O6: (-2.224,8.865,-4.699)
O4': (-4.719,13.584,-0.689)
C8: (-4.983,10.802,-2.079)
C2: (-2.122,12.409,-4.973)
C6: (-2.520,10.045,-4.467)
C5: (-3.474,10.546,-3.553)
C4: (-3.654,11.907,-3.442)
P: (-4.448,14.990,2.986)
C4': (-5.738,14.308,0.047)
C2': (-6.712,13.197,-1.814)
O2': (-7.352,13.378,-3.058)
N1: (-1.876,11.070,-5.151)
N2: (-1.390,13.236,-5.735)
N3: (-3.014,12.894,-4.116)
N7: (-4.318,9.862,-2.688)
N9: (-4.632,12.067,-2.483)
O5': (-4.917,13.649,2.255)
O3': (-6.944,15.579,-1.593)
OP2: (-3.882,14.588,4.294)
C3': (-6.951,14.365,-0.875)
C1': (-5.207,13.308,-1.987)
C5': (-6.028,13.631,1.372)
O6: (-2.224,8.865,-4.699)
O4': (-4.719,13.584,-0.689)
C8: (-4.983,10.802,-2.079)
C2: (-2.122,12.409,-4.973)
C6: (-2.520,10.045,-4.467)
C5: (-3.474,10.546,-3.553)
C4: (-3.654,11.907,-3.442)
P: (-4.448,14.990,2.986)
C4': (-5.738,14.308,0.047)
C2': (-6.712,13.197,-1.814)
O2': (-7.352,13.378,-3.058)
N1: (-1.876,11.070,-5.151)
N2: (-1.390,13.236,-5.735)
N3: (-3.014,12.894,-4.116)
N7: (-4.318,9.862,-2.688)
N9: (-4.632,12.067,-2.483)
O5': (-4.917,13.649,2.255)
O3': (-6.944,15.579,-1.593)
OP1: (-0.953,8.615,-11.457)
OP2: (-2.659,8.442,-9.532)
C3': (-0.932,13.147,-9.333)
C1': (-3.047,14.154,-9.404)
C5': (-1.413,11.597,-11.319)
O6: (-6.618,12.071,-5.054)
O4': (-2.893,13.381,-10.582)
C8: (-3.880,12.032,-8.319)
C2: (-5.795,15.335,-6.194)
C6: (-6.078,12.948,-5.740)
C5: (-5.172,12.781,-6.814)
C4: (-4.674,13.889,-7.461)
P: (-2.144,9.125,-10.743)
C4': (-1.501,12.996,-10.736)
C2': (-1.632,14.428,-8.908)
O2': (-1.092,15.551,-9.574)
N1: (-6.344,14.291,-5.489)
N2: (-6.174,16.558,-5.801)
N3: (-4.941,15.193,-7.204)
N7: (-4.662,11.615,-7.366)
N9: (-3.836,13.399,-8.439)
O5': (-1.872,10.653,-10.360)
O3': (0.480,13.310,-9.365)
OP2: (-2.659,8.442,-9.532)
C3': (-0.932,13.147,-9.333)
C1': (-3.047,14.154,-9.404)
C5': (-1.413,11.597,-11.319)
O6: (-6.618,12.071,-5.054)
O4': (-2.893,13.381,-10.582)
C8: (-3.880,12.032,-8.319)
C2: (-5.795,15.335,-6.194)
C6: (-6.078,12.948,-5.740)
C5: (-5.172,12.781,-6.814)
C4: (-4.674,13.889,-7.461)
P: (-2.144,9.125,-10.743)
C4': (-1.501,12.996,-10.736)
C2': (-1.632,14.428,-8.908)
O2': (-1.092,15.551,-9.574)
N1: (-6.344,14.291,-5.489)
N2: (-6.174,16.558,-5.801)
N3: (-4.941,15.193,-7.204)
N7: (-4.662,11.615,-7.366)
N9: (-3.836,13.399,-8.439)
O5': (-1.872,10.653,-10.360)
O3': (0.480,13.310,-9.365)
Image (generated by PyMOL):