Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A41:A70
Extra
PDB:
ATOM 1 O3' U A 40 -10.397 -58.932 13.728 1.00 29.81 O
ATOM 2 P G A 41 -9.480 -57.804 14.396 1.00 28.83 P
ATOM 3 OP1 G A 41 -8.271 -57.616 13.540 1.00 28.83 O
ATOM 4 OP2 G A 41 -9.321 -58.170 15.827 1.00 27.06 O
ATOM 5 O5' G A 41 -10.386 -56.497 14.335 1.00 27.48 O
ATOM 6 C5' G A 41 -10.925 -56.005 13.094 1.00 24.11 C
ATOM 7 C4' G A 41 -11.568 -54.654 13.317 1.00 22.83 C
ATOM 8 O4' G A 41 -12.648 -54.789 14.284 1.00 22.90 O
ATOM 9 C3' G A 41 -10.670 -53.604 13.953 1.00 22.17 C
ATOM 10 O3' G A 41 -9.815 -52.933 13.061 1.00 20.39 O
ATOM 11 C2' G A 41 -11.668 -52.654 14.586 1.00 21.72 C
ATOM 12 O2' G A 41 -12.248 -51.810 13.613 1.00 21.50 O
ATOM 13 C1' G A 41 -12.701 -53.638 15.119 1.00 21.89 C
ATOM 14 N9 G A 41 -12.339 -54.041 16.476 1.00 21.48 N
ATOM 15 C8 G A 41 -11.632 -55.160 16.843 1.00 20.23 C
ATOM 16 N7 G A 41 -11.444 -55.249 18.130 1.00 20.62 N
ATOM 17 C5 G A 41 -12.060 -54.121 18.648 1.00 20.78 C
ATOM 18 C6 G A 41 -12.170 -53.671 19.983 1.00 21.74 C
ATOM 19 O6 G A 41 -11.701 -54.182 21.009 1.00 22.23 O
ATOM 20 N1 G A 41 -12.894 -52.489 20.066 1.00 21.37 N
ATOM 21 C2 G A 41 -13.418 -51.811 19.000 1.00 20.66 C
ATOM 22 N2 G A 41 -14.086 -50.685 19.290 1.00 21.10 N
ATOM 23 N3 G A 41 -13.302 -52.203 17.746 1.00 20.49 N
ATOM 24 C4 G A 41 -12.622 -53.364 17.644 1.00 21.48 C
ATOM 25 P A A 42 -8.472 -52.290 13.633 1.00 18.63 P
ATOM 26 OP1 A A 42 -7.359 -53.250 13.526 1.00 17.13 O
ATOM 27 OP2 A A 42 -8.789 -51.674 14.946 1.00 20.14 O
ATOM 28 O5' A A 42 -8.228 -51.085 12.655 1.00 19.40 O
TER
ATOM 1 O3' G B 69 -11.732 -46.789 25.047 1.00 21.32 O
ATOM 2 P G B 70 -13.032 -47.634 24.644 1.00 21.70 P
ATOM 3 OP1 G B 70 -14.167 -47.058 25.422 1.00 23.03 O
ATOM 4 OP2 G B 70 -12.693 -49.078 24.788 1.00 20.27 O
ATOM 5 O5' G B 70 -13.243 -47.284 23.104 1.00 20.22 O
ATOM 6 C5' G B 70 -13.615 -45.950 22.697 1.00 21.18 C
ATOM 7 C4' G B 70 -13.778 -45.881 21.197 1.00 21.74 C
ATOM 8 O4' G B 70 -12.495 -46.090 20.556 1.00 21.83 O
ATOM 9 C3' G B 70 -14.700 -46.931 20.601 1.00 22.11 C
ATOM 10 O3' G B 70 -16.024 -46.438 20.561 1.00 24.51 O
ATOM 11 C2' G B 70 -14.169 -47.070 19.181 1.00 22.04 C
ATOM 12 O2' G B 70 -14.667 -46.038 18.355 1.00 22.60 O
ATOM 13 C1' G B 70 -12.665 -46.864 19.385 1.00 20.91 C
ATOM 14 N9 G B 70 -11.931 -48.111 19.577 1.00 18.78 N
ATOM 15 C8 G B 70 -11.743 -48.780 20.763 1.00 18.39 C
ATOM 16 N7 G B 70 -11.036 -49.865 20.629 1.00 19.30 N
ATOM 17 C5 G B 70 -10.742 -49.915 19.273 1.00 18.97 C
ATOM 18 C6 G B 70 -10.009 -50.870 18.531 1.00 19.61 C
ATOM 19 O6 G B 70 -9.461 -51.899 18.930 1.00 22.38 O
ATOM 20 N1 G B 70 -9.953 -50.541 17.186 1.00 19.59 N
ATOM 21 C2 G B 70 -10.533 -49.439 16.623 1.00 19.80 C
ATOM 22 N2 G B 70 -10.370 -49.304 15.302 1.00 20.22 N
ATOM 23 N3 G B 70 -11.225 -48.538 17.304 1.00 19.13 N
ATOM 24 C4 G B 70 -11.288 -48.839 18.614 1.00 18.13 C
ATOM 25 P A B 71 -17.143 -47.039 21.545 1.00 25.36 P
ATOM 26 OP1 A B 71 -17.137 -46.215 22.780 1.00 26.42 O
ATOM 27 OP2 A B 71 -16.934 -48.506 21.647 1.00 24.17 O
ATOM 28 O5' A B 71 -18.493 -46.694 20.763 1.00 24.94 O
TER
ATOM 2 P G A 41 -9.480 -57.804 14.396 1.00 28.83 P
ATOM 3 OP1 G A 41 -8.271 -57.616 13.540 1.00 28.83 O
ATOM 4 OP2 G A 41 -9.321 -58.170 15.827 1.00 27.06 O
ATOM 5 O5' G A 41 -10.386 -56.497 14.335 1.00 27.48 O
ATOM 6 C5' G A 41 -10.925 -56.005 13.094 1.00 24.11 C
ATOM 7 C4' G A 41 -11.568 -54.654 13.317 1.00 22.83 C
ATOM 8 O4' G A 41 -12.648 -54.789 14.284 1.00 22.90 O
ATOM 9 C3' G A 41 -10.670 -53.604 13.953 1.00 22.17 C
ATOM 10 O3' G A 41 -9.815 -52.933 13.061 1.00 20.39 O
ATOM 11 C2' G A 41 -11.668 -52.654 14.586 1.00 21.72 C
ATOM 12 O2' G A 41 -12.248 -51.810 13.613 1.00 21.50 O
ATOM 13 C1' G A 41 -12.701 -53.638 15.119 1.00 21.89 C
ATOM 14 N9 G A 41 -12.339 -54.041 16.476 1.00 21.48 N
ATOM 15 C8 G A 41 -11.632 -55.160 16.843 1.00 20.23 C
ATOM 16 N7 G A 41 -11.444 -55.249 18.130 1.00 20.62 N
ATOM 17 C5 G A 41 -12.060 -54.121 18.648 1.00 20.78 C
ATOM 18 C6 G A 41 -12.170 -53.671 19.983 1.00 21.74 C
ATOM 19 O6 G A 41 -11.701 -54.182 21.009 1.00 22.23 O
ATOM 20 N1 G A 41 -12.894 -52.489 20.066 1.00 21.37 N
ATOM 21 C2 G A 41 -13.418 -51.811 19.000 1.00 20.66 C
ATOM 22 N2 G A 41 -14.086 -50.685 19.290 1.00 21.10 N
ATOM 23 N3 G A 41 -13.302 -52.203 17.746 1.00 20.49 N
ATOM 24 C4 G A 41 -12.622 -53.364 17.644 1.00 21.48 C
ATOM 25 P A A 42 -8.472 -52.290 13.633 1.00 18.63 P
ATOM 26 OP1 A A 42 -7.359 -53.250 13.526 1.00 17.13 O
ATOM 27 OP2 A A 42 -8.789 -51.674 14.946 1.00 20.14 O
ATOM 28 O5' A A 42 -8.228 -51.085 12.655 1.00 19.40 O
TER
ATOM 1 O3' G B 69 -11.732 -46.789 25.047 1.00 21.32 O
ATOM 2 P G B 70 -13.032 -47.634 24.644 1.00 21.70 P
ATOM 3 OP1 G B 70 -14.167 -47.058 25.422 1.00 23.03 O
ATOM 4 OP2 G B 70 -12.693 -49.078 24.788 1.00 20.27 O
ATOM 5 O5' G B 70 -13.243 -47.284 23.104 1.00 20.22 O
ATOM 6 C5' G B 70 -13.615 -45.950 22.697 1.00 21.18 C
ATOM 7 C4' G B 70 -13.778 -45.881 21.197 1.00 21.74 C
ATOM 8 O4' G B 70 -12.495 -46.090 20.556 1.00 21.83 O
ATOM 9 C3' G B 70 -14.700 -46.931 20.601 1.00 22.11 C
ATOM 10 O3' G B 70 -16.024 -46.438 20.561 1.00 24.51 O
ATOM 11 C2' G B 70 -14.169 -47.070 19.181 1.00 22.04 C
ATOM 12 O2' G B 70 -14.667 -46.038 18.355 1.00 22.60 O
ATOM 13 C1' G B 70 -12.665 -46.864 19.385 1.00 20.91 C
ATOM 14 N9 G B 70 -11.931 -48.111 19.577 1.00 18.78 N
ATOM 15 C8 G B 70 -11.743 -48.780 20.763 1.00 18.39 C
ATOM 16 N7 G B 70 -11.036 -49.865 20.629 1.00 19.30 N
ATOM 17 C5 G B 70 -10.742 -49.915 19.273 1.00 18.97 C
ATOM 18 C6 G B 70 -10.009 -50.870 18.531 1.00 19.61 C
ATOM 19 O6 G B 70 -9.461 -51.899 18.930 1.00 22.38 O
ATOM 20 N1 G B 70 -9.953 -50.541 17.186 1.00 19.59 N
ATOM 21 C2 G B 70 -10.533 -49.439 16.623 1.00 19.80 C
ATOM 22 N2 G B 70 -10.370 -49.304 15.302 1.00 20.22 N
ATOM 23 N3 G B 70 -11.225 -48.538 17.304 1.00 19.13 N
ATOM 24 C4 G B 70 -11.288 -48.839 18.614 1.00 18.13 C
ATOM 25 P A B 71 -17.143 -47.039 21.545 1.00 25.36 P
ATOM 26 OP1 A B 71 -17.137 -46.215 22.780 1.00 26.42 O
ATOM 27 OP2 A B 71 -16.934 -48.506 21.647 1.00 24.17 O
ATOM 28 O5' A B 71 -18.493 -46.694 20.763 1.00 24.94 O
TER
Atoms:
OP1: (-8.271,-57.616,13.540)
OP2: (-9.321,-58.170,15.827)
C3': (-10.670,-53.604,13.953)
C1': (-12.701,-53.638,15.119)
C5': (-10.925,-56.005,13.094)
O6: (-11.701,-54.182,21.009)
O4': (-12.648,-54.789,14.284)
C8: (-11.632,-55.160,16.843)
C2: (-13.418,-51.811,19.000)
C6: (-12.170,-53.671,19.983)
C5: (-12.060,-54.121,18.648)
C4: (-12.622,-53.364,17.644)
P: (-9.480,-57.804,14.396)
C4': (-11.568,-54.654,13.317)
C2': (-11.668,-52.654,14.586)
O2': (-12.248,-51.810,13.613)
N1: (-12.894,-52.489,20.066)
N2: (-14.086,-50.685,19.290)
N3: (-13.302,-52.203,17.746)
N7: (-11.444,-55.249,18.130)
N9: (-12.339,-54.041,16.476)
O5': (-10.386,-56.497,14.335)
O3': (-9.815,-52.933,13.061)
OP2: (-9.321,-58.170,15.827)
C3': (-10.670,-53.604,13.953)
C1': (-12.701,-53.638,15.119)
C5': (-10.925,-56.005,13.094)
O6: (-11.701,-54.182,21.009)
O4': (-12.648,-54.789,14.284)
C8: (-11.632,-55.160,16.843)
C2: (-13.418,-51.811,19.000)
C6: (-12.170,-53.671,19.983)
C5: (-12.060,-54.121,18.648)
C4: (-12.622,-53.364,17.644)
P: (-9.480,-57.804,14.396)
C4': (-11.568,-54.654,13.317)
C2': (-11.668,-52.654,14.586)
O2': (-12.248,-51.810,13.613)
N1: (-12.894,-52.489,20.066)
N2: (-14.086,-50.685,19.290)
N3: (-13.302,-52.203,17.746)
N7: (-11.444,-55.249,18.130)
N9: (-12.339,-54.041,16.476)
O5': (-10.386,-56.497,14.335)
O3': (-9.815,-52.933,13.061)
OP1: (-14.167,-47.058,25.422)
OP2: (-12.693,-49.078,24.788)
C3': (-14.700,-46.931,20.601)
C1': (-12.665,-46.864,19.385)
C5': (-13.615,-45.950,22.697)
O6: (-9.461,-51.899,18.930)
O4': (-12.495,-46.090,20.556)
C8: (-11.743,-48.780,20.763)
C2: (-10.533,-49.439,16.623)
C6: (-10.009,-50.870,18.531)
C5: (-10.742,-49.915,19.273)
C4: (-11.288,-48.839,18.614)
P: (-13.032,-47.634,24.644)
C4': (-13.778,-45.881,21.197)
C2': (-14.169,-47.070,19.181)
O2': (-14.667,-46.038,18.355)
N1: (-9.953,-50.541,17.186)
N2: (-10.370,-49.304,15.302)
N3: (-11.225,-48.538,17.304)
N7: (-11.036,-49.865,20.629)
N9: (-11.931,-48.111,19.577)
O5': (-13.243,-47.284,23.104)
O3': (-16.024,-46.438,20.561)
OP2: (-12.693,-49.078,24.788)
C3': (-14.700,-46.931,20.601)
C1': (-12.665,-46.864,19.385)
C5': (-13.615,-45.950,22.697)
O6: (-9.461,-51.899,18.930)
O4': (-12.495,-46.090,20.556)
C8: (-11.743,-48.780,20.763)
C2: (-10.533,-49.439,16.623)
C6: (-10.009,-50.870,18.531)
C5: (-10.742,-49.915,19.273)
C4: (-11.288,-48.839,18.614)
P: (-13.032,-47.634,24.644)
C4': (-13.778,-45.881,21.197)
C2': (-14.169,-47.070,19.181)
O2': (-14.667,-46.038,18.355)
N1: (-9.953,-50.541,17.186)
N2: (-10.370,-49.304,15.302)
N3: (-11.225,-48.538,17.304)
N7: (-11.036,-49.865,20.629)
N9: (-11.931,-48.111,19.577)
O5': (-13.243,-47.284,23.104)
O3': (-16.024,-46.438,20.561)
Image (generated by PyMOL):