Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:G8:G10
Extra
PDB:
ATOM 1 O3' C A 7 41.023 -38.820 -12.974 1.00 43.09 O
ATOM 2 P G A 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 3 OP1 G A 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 4 OP2 G A 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 5 O5' G A 8 41.133 -36.823 -14.452 1.00 46.52 O
ATOM 6 C5' G A 8 40.750 -37.373 -15.698 1.00 47.18 C
ATOM 7 C4' G A 8 39.672 -36.492 -16.251 1.00 48.10 C
ATOM 8 O4' G A 8 38.649 -36.381 -15.232 1.00 47.82 O
ATOM 9 C3' G A 8 40.093 -35.057 -16.487 1.00 49.31 C
ATOM 10 O3' G A 8 40.634 -34.787 -17.770 1.00 51.41 O
ATOM 11 C2' G A 8 38.757 -34.363 -16.388 1.00 49.21 C
ATOM 12 O2' G A 8 38.027 -34.540 -17.580 1.00 49.58 O
ATOM 13 C1' G A 8 38.106 -35.083 -15.230 1.00 47.54 C
ATOM 14 N9 G A 8 38.315 -34.454 -13.935 1.00 46.26 N
ATOM 15 C8 G A 8 39.285 -34.690 -12.997 1.00 45.76 C
ATOM 16 N7 G A 8 39.168 -33.955 -11.926 1.00 44.71 N
ATOM 17 C5 G A 8 38.036 -33.192 -12.170 1.00 45.87 C
ATOM 18 C6 G A 8 37.375 -32.212 -11.405 1.00 46.40 C
ATOM 19 O6 G A 8 37.636 -31.765 -10.303 1.00 48.49 O
ATOM 20 N1 G A 8 36.268 -31.682 -12.017 1.00 46.26 N
ATOM 21 C2 G A 8 35.826 -32.036 -13.237 1.00 45.90 C
ATOM 22 N2 G A 8 34.732 -31.387 -13.641 1.00 46.20 N
ATOM 23 N3 G A 8 36.414 -32.953 -13.985 1.00 46.00 N
ATOM 24 C4 G A 8 37.509 -33.486 -13.395 1.00 46.26 C
ATOM 25 P U A 9 42.040 -34.046 -17.891 1.00 52.91 P
ATOM 26 OP1 U A 9 42.756 -34.630 -19.025 1.00 54.48 O
ATOM 27 OP2 U A 9 42.716 -34.070 -16.585 1.00 54.30 O
ATOM 28 O5' U A 9 41.704 -32.545 -18.202 1.00 56.47 O
TER
ATOM 1 O3' U B 9 39.173 -30.431 -20.867 1.00 65.58 O
ATOM 2 P G B 10 38.073 -29.340 -21.206 1.00 65.34 P
ATOM 3 OP1 G B 10 36.753 -29.791 -20.697 1.00 65.59 O
ATOM 4 OP2 G B 10 38.308 -29.097 -22.633 1.00 66.85 O
ATOM 5 O5' G B 10 38.543 -27.984 -20.474 1.00 68.04 O
ATOM 6 C5' G B 10 37.748 -27.048 -19.631 1.00 68.08 C
ATOM 7 C4' G B 10 36.656 -27.725 -18.826 1.00 66.19 C
ATOM 8 O4' G B 10 37.037 -28.130 -17.494 1.00 65.57 O
ATOM 9 C3' G B 10 35.415 -26.940 -18.493 1.00 64.29 C
ATOM 10 O3' G B 10 34.868 -26.333 -19.631 1.00 61.29 O
ATOM 11 C2' G B 10 34.828 -28.259 -18.114 1.00 65.23 C
ATOM 12 O2' G B 10 34.937 -29.132 -19.212 1.00 63.74 O
ATOM 13 C1' G B 10 35.841 -28.721 -17.083 1.00 65.54 C
ATOM 14 N9 G B 10 35.699 -28.413 -15.671 1.00 65.39 N
ATOM 15 C8 G B 10 34.788 -27.874 -14.789 1.00 65.68 C
ATOM 16 N7 G B 10 35.186 -27.905 -13.538 1.00 63.95 N
ATOM 17 C5 G B 10 36.413 -28.509 -13.662 1.00 64.62 C
ATOM 18 C6 G B 10 37.381 -28.850 -12.733 1.00 66.23 C
ATOM 19 O6 G B 10 37.396 -28.692 -11.524 1.00 68.24 O
ATOM 20 N1 G B 10 38.449 -29.450 -13.336 1.00 66.41 N
ATOM 21 C2 G B 10 38.550 -29.678 -14.677 1.00 66.46 C
ATOM 22 N2 G B 10 39.641 -30.266 -15.124 1.00 67.82 N
ATOM 23 N3 G B 10 37.676 -29.373 -15.566 1.00 63.88 N
ATOM 24 C4 G B 10 36.688 -28.809 -14.941 1.00 63.94 C
ATOM 25 P A B 11 33.340 -26.202 -20.104 1.00 58.00 P
ATOM 26 OP1 A B 11 33.468 -25.860 -21.527 1.00 59.49 O
ATOM 27 OP2 A B 11 32.554 -25.321 -19.226 1.00 58.99 O
ATOM 28 O5' A B 11 32.736 -27.672 -20.056 1.00 58.07 O
TER
ATOM 2 P G A 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 3 OP1 G A 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 4 OP2 G A 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 5 O5' G A 8 41.133 -36.823 -14.452 1.00 46.52 O
ATOM 6 C5' G A 8 40.750 -37.373 -15.698 1.00 47.18 C
ATOM 7 C4' G A 8 39.672 -36.492 -16.251 1.00 48.10 C
ATOM 8 O4' G A 8 38.649 -36.381 -15.232 1.00 47.82 O
ATOM 9 C3' G A 8 40.093 -35.057 -16.487 1.00 49.31 C
ATOM 10 O3' G A 8 40.634 -34.787 -17.770 1.00 51.41 O
ATOM 11 C2' G A 8 38.757 -34.363 -16.388 1.00 49.21 C
ATOM 12 O2' G A 8 38.027 -34.540 -17.580 1.00 49.58 O
ATOM 13 C1' G A 8 38.106 -35.083 -15.230 1.00 47.54 C
ATOM 14 N9 G A 8 38.315 -34.454 -13.935 1.00 46.26 N
ATOM 15 C8 G A 8 39.285 -34.690 -12.997 1.00 45.76 C
ATOM 16 N7 G A 8 39.168 -33.955 -11.926 1.00 44.71 N
ATOM 17 C5 G A 8 38.036 -33.192 -12.170 1.00 45.87 C
ATOM 18 C6 G A 8 37.375 -32.212 -11.405 1.00 46.40 C
ATOM 19 O6 G A 8 37.636 -31.765 -10.303 1.00 48.49 O
ATOM 20 N1 G A 8 36.268 -31.682 -12.017 1.00 46.26 N
ATOM 21 C2 G A 8 35.826 -32.036 -13.237 1.00 45.90 C
ATOM 22 N2 G A 8 34.732 -31.387 -13.641 1.00 46.20 N
ATOM 23 N3 G A 8 36.414 -32.953 -13.985 1.00 46.00 N
ATOM 24 C4 G A 8 37.509 -33.486 -13.395 1.00 46.26 C
ATOM 25 P U A 9 42.040 -34.046 -17.891 1.00 52.91 P
ATOM 26 OP1 U A 9 42.756 -34.630 -19.025 1.00 54.48 O
ATOM 27 OP2 U A 9 42.716 -34.070 -16.585 1.00 54.30 O
ATOM 28 O5' U A 9 41.704 -32.545 -18.202 1.00 56.47 O
TER
ATOM 1 O3' U B 9 39.173 -30.431 -20.867 1.00 65.58 O
ATOM 2 P G B 10 38.073 -29.340 -21.206 1.00 65.34 P
ATOM 3 OP1 G B 10 36.753 -29.791 -20.697 1.00 65.59 O
ATOM 4 OP2 G B 10 38.308 -29.097 -22.633 1.00 66.85 O
ATOM 5 O5' G B 10 38.543 -27.984 -20.474 1.00 68.04 O
ATOM 6 C5' G B 10 37.748 -27.048 -19.631 1.00 68.08 C
ATOM 7 C4' G B 10 36.656 -27.725 -18.826 1.00 66.19 C
ATOM 8 O4' G B 10 37.037 -28.130 -17.494 1.00 65.57 O
ATOM 9 C3' G B 10 35.415 -26.940 -18.493 1.00 64.29 C
ATOM 10 O3' G B 10 34.868 -26.333 -19.631 1.00 61.29 O
ATOM 11 C2' G B 10 34.828 -28.259 -18.114 1.00 65.23 C
ATOM 12 O2' G B 10 34.937 -29.132 -19.212 1.00 63.74 O
ATOM 13 C1' G B 10 35.841 -28.721 -17.083 1.00 65.54 C
ATOM 14 N9 G B 10 35.699 -28.413 -15.671 1.00 65.39 N
ATOM 15 C8 G B 10 34.788 -27.874 -14.789 1.00 65.68 C
ATOM 16 N7 G B 10 35.186 -27.905 -13.538 1.00 63.95 N
ATOM 17 C5 G B 10 36.413 -28.509 -13.662 1.00 64.62 C
ATOM 18 C6 G B 10 37.381 -28.850 -12.733 1.00 66.23 C
ATOM 19 O6 G B 10 37.396 -28.692 -11.524 1.00 68.24 O
ATOM 20 N1 G B 10 38.449 -29.450 -13.336 1.00 66.41 N
ATOM 21 C2 G B 10 38.550 -29.678 -14.677 1.00 66.46 C
ATOM 22 N2 G B 10 39.641 -30.266 -15.124 1.00 67.82 N
ATOM 23 N3 G B 10 37.676 -29.373 -15.566 1.00 63.88 N
ATOM 24 C4 G B 10 36.688 -28.809 -14.941 1.00 63.94 C
ATOM 25 P A B 11 33.340 -26.202 -20.104 1.00 58.00 P
ATOM 26 OP1 A B 11 33.468 -25.860 -21.527 1.00 59.49 O
ATOM 27 OP2 A B 11 32.554 -25.321 -19.226 1.00 58.99 O
ATOM 28 O5' A B 11 32.736 -27.672 -20.056 1.00 58.07 O
TER
Atoms:
OP1: (43.192,-38.199,-14.060)
OP2: (42.253,-36.793,-12.201)
C3': (40.093,-35.057,-16.487)
C1': (38.106,-35.083,-15.230)
C5': (40.750,-37.373,-15.698)
O6: (37.636,-31.765,-10.303)
O4': (38.649,-36.381,-15.232)
C8: (39.285,-34.690,-12.997)
C2: (35.826,-32.036,-13.237)
C6: (37.375,-32.212,-11.405)
C5: (38.036,-33.192,-12.170)
C4: (37.509,-33.486,-13.395)
P: (42.009,-37.640,-13.387)
C4': (39.672,-36.492,-16.251)
C2': (38.757,-34.363,-16.388)
O2': (38.027,-34.540,-17.580)
N1: (36.268,-31.682,-12.017)
N2: (34.732,-31.387,-13.641)
N3: (36.414,-32.953,-13.985)
N7: (39.168,-33.955,-11.926)
N9: (38.315,-34.454,-13.935)
O5': (41.133,-36.823,-14.452)
O3': (40.634,-34.787,-17.770)
OP2: (42.253,-36.793,-12.201)
C3': (40.093,-35.057,-16.487)
C1': (38.106,-35.083,-15.230)
C5': (40.750,-37.373,-15.698)
O6: (37.636,-31.765,-10.303)
O4': (38.649,-36.381,-15.232)
C8: (39.285,-34.690,-12.997)
C2: (35.826,-32.036,-13.237)
C6: (37.375,-32.212,-11.405)
C5: (38.036,-33.192,-12.170)
C4: (37.509,-33.486,-13.395)
P: (42.009,-37.640,-13.387)
C4': (39.672,-36.492,-16.251)
C2': (38.757,-34.363,-16.388)
O2': (38.027,-34.540,-17.580)
N1: (36.268,-31.682,-12.017)
N2: (34.732,-31.387,-13.641)
N3: (36.414,-32.953,-13.985)
N7: (39.168,-33.955,-11.926)
N9: (38.315,-34.454,-13.935)
O5': (41.133,-36.823,-14.452)
O3': (40.634,-34.787,-17.770)
OP1: (36.753,-29.791,-20.697)
OP2: (38.308,-29.097,-22.633)
C3': (35.415,-26.940,-18.493)
C1': (35.841,-28.721,-17.083)
C5': (37.748,-27.048,-19.631)
O6: (37.396,-28.692,-11.524)
O4': (37.037,-28.130,-17.494)
C8: (34.788,-27.874,-14.789)
C2: (38.550,-29.678,-14.677)
C6: (37.381,-28.850,-12.733)
C5: (36.413,-28.509,-13.662)
C4: (36.688,-28.809,-14.941)
P: (38.073,-29.340,-21.206)
C4': (36.656,-27.725,-18.826)
C2': (34.828,-28.259,-18.114)
O2': (34.937,-29.132,-19.212)
N1: (38.449,-29.450,-13.336)
N2: (39.641,-30.266,-15.124)
N3: (37.676,-29.373,-15.566)
N7: (35.186,-27.905,-13.538)
N9: (35.699,-28.413,-15.671)
O5': (38.543,-27.984,-20.474)
O3': (34.868,-26.333,-19.631)
OP2: (38.308,-29.097,-22.633)
C3': (35.415,-26.940,-18.493)
C1': (35.841,-28.721,-17.083)
C5': (37.748,-27.048,-19.631)
O6: (37.396,-28.692,-11.524)
O4': (37.037,-28.130,-17.494)
C8: (34.788,-27.874,-14.789)
C2: (38.550,-29.678,-14.677)
C6: (37.381,-28.850,-12.733)
C5: (36.413,-28.509,-13.662)
C4: (36.688,-28.809,-14.941)
P: (38.073,-29.340,-21.206)
C4': (36.656,-27.725,-18.826)
C2': (34.828,-28.259,-18.114)
O2': (34.937,-29.132,-19.212)
N1: (38.449,-29.450,-13.336)
N2: (39.641,-30.266,-15.124)
N3: (37.676,-29.373,-15.566)
N7: (35.186,-27.905,-13.538)
N9: (35.699,-28.413,-15.671)
O5': (38.543,-27.984,-20.474)
O3': (34.868,-26.333,-19.631)
Image (generated by PyMOL):