Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DVZ:A8:A17
Extra
PDB:
ATOM 1 O3' A A 7 -2.497 50.069 -18.968 0.55 12.36 O
ATOM 2 P G A 8 -1.566 49.936 -20.262 1.00 13.71 P
ATOM 3 OP1 G A 8 -0.163 50.173 -19.859 1.00 15.11 O
ATOM 4 OP2 G A 8 -2.173 50.709 -21.361 1.00 13.71 O
ATOM 5 O5' G A 8 -1.782 48.402 -20.668 1.00 17.18 O
ATOM 6 C5' G A 8 -0.951 47.351 -20.199 1.00 18.44 C
ATOM 7 C4' G A 8 -1.321 46.857 -18.815 1.00 15.07 C
ATOM 8 O4' G A 8 -2.651 46.265 -18.793 1.00 14.64 O
ATOM 9 C3' G A 8 -0.399 45.748 -18.335 1.00 13.46 C
ATOM 10 O3' G A 8 -0.365 45.801 -16.927 1.00 11.58 O
ATOM 11 C2' G A 8 -1.152 44.518 -18.825 1.00 13.06 C
ATOM 12 O2' G A 8 -0.721 43.320 -18.211 1.00 15.50 O
ATOM 13 C1' G A 8 -2.529 44.931 -18.332 1.00 12.15 C
ATOM 14 N9 G A 8 -3.656 44.128 -18.804 1.00 13.23 N
ATOM 15 C8 G A 8 -3.785 43.419 -19.974 1.00 15.66 C
ATOM 16 N7 G A 8 -4.936 42.808 -20.081 1.00 15.37 N
ATOM 17 C5 G A 8 -5.611 43.132 -18.909 1.00 13.09 C
ATOM 18 C6 G A 8 -6.902 42.769 -18.451 1.00 13.39 C
ATOM 19 O6 G A 8 -7.745 42.055 -19.011 1.00 16.10 O
ATOM 20 N1 G A 8 -7.187 43.324 -17.204 1.00 13.23 N
ATOM 21 C2 G A 8 -6.332 44.129 -16.491 1.00 11.97 C
ATOM 22 N2 G A 8 -6.775 44.574 -15.307 1.00 11.99 N
ATOM 23 N3 G A 8 -5.123 44.477 -16.909 1.00 11.77 N
ATOM 24 C4 G A 8 -4.833 43.943 -18.119 1.00 12.06 C
ATOM 25 P U A 9 0.728 44.980 -16.101 1.00 12.53 P
ATOM 26 OP1 U A 9 1.907 44.757 -16.969 1.00 14.29 O
ATOM 27 OP2 U A 9 0.051 43.827 -15.466 1.00 13.45 O
ATOM 28 O5' U A 9 1.103 46.005 -14.937 1.00 12.66 O
TER
ATOM 1 O3' G B 16 -9.368 36.663 -15.570 1.00 10.94 O
ATOM 2 P G B 17 -9.712 38.064 -16.264 1.00 11.45 P
ATOM 3 OP1 G B 17 -11.185 38.157 -16.373 1.00 12.63 O
ATOM 4 OP2 G B 17 -8.871 38.217 -17.471 1.00 12.97 O
ATOM 5 O5' G B 17 -9.175 39.127 -15.199 1.00 10.47 O
ATOM 6 C5' G B 17 -9.713 39.197 -13.890 1.00 10.84 C
ATOM 7 C4' G B 17 -8.895 40.159 -13.051 1.00 9.89 C
ATOM 8 O4' G B 17 -7.528 39.687 -12.955 1.00 9.64 O
ATOM 9 C3' G B 17 -8.742 41.556 -13.630 1.00 9.06 C
ATOM 10 O3' G B 17 -9.895 42.339 -13.365 1.00 9.92 O
ATOM 11 C2' G B 17 -7.521 42.035 -12.855 1.00 10.01 C
ATOM 12 O2' G B 17 -7.801 42.283 -11.493 1.00 9.68 O
ATOM 13 C1' G B 17 -6.644 40.796 -12.962 1.00 9.30 C
ATOM 14 N9 G B 17 -5.845 40.768 -14.184 1.00 9.37 N
ATOM 15 C8 G B 17 -6.092 40.029 -15.315 1.00 10.07 C
ATOM 16 N7 G B 17 -5.205 40.207 -16.255 1.00 10.79 N
ATOM 17 C5 G B 17 -4.314 41.125 -15.715 1.00 10.66 C
ATOM 18 C6 G B 17 -3.146 41.697 -16.274 1.00 11.44 C
ATOM 19 O6 G B 17 -2.656 41.495 -17.393 1.00 12.57 O
ATOM 20 N1 G B 17 -2.530 42.582 -15.392 1.00 10.24 N
ATOM 21 C2 G B 17 -2.988 42.877 -14.131 1.00 10.42 C
ATOM 22 N2 G B 17 -2.257 43.759 -13.432 1.00 10.34 N
ATOM 23 N3 G B 17 -4.082 42.348 -13.596 1.00 9.64 N
ATOM 24 C4 G B 17 -4.694 41.483 -14.441 1.00 9.63 C
ATOM 25 P A B 18 -10.199 43.618 -14.278 1.00 9.50 P
ATOM 26 OP1 A B 18 -11.609 44.002 -14.050 1.00 10.55 O
ATOM 27 OP2 A B 18 -9.727 43.337 -15.651 1.00 10.74 O
ATOM 28 O5' A B 18 -9.212 44.725 -13.671 1.00 8.96 O
TER
ATOM 2 P G A 8 -1.566 49.936 -20.262 1.00 13.71 P
ATOM 3 OP1 G A 8 -0.163 50.173 -19.859 1.00 15.11 O
ATOM 4 OP2 G A 8 -2.173 50.709 -21.361 1.00 13.71 O
ATOM 5 O5' G A 8 -1.782 48.402 -20.668 1.00 17.18 O
ATOM 6 C5' G A 8 -0.951 47.351 -20.199 1.00 18.44 C
ATOM 7 C4' G A 8 -1.321 46.857 -18.815 1.00 15.07 C
ATOM 8 O4' G A 8 -2.651 46.265 -18.793 1.00 14.64 O
ATOM 9 C3' G A 8 -0.399 45.748 -18.335 1.00 13.46 C
ATOM 10 O3' G A 8 -0.365 45.801 -16.927 1.00 11.58 O
ATOM 11 C2' G A 8 -1.152 44.518 -18.825 1.00 13.06 C
ATOM 12 O2' G A 8 -0.721 43.320 -18.211 1.00 15.50 O
ATOM 13 C1' G A 8 -2.529 44.931 -18.332 1.00 12.15 C
ATOM 14 N9 G A 8 -3.656 44.128 -18.804 1.00 13.23 N
ATOM 15 C8 G A 8 -3.785 43.419 -19.974 1.00 15.66 C
ATOM 16 N7 G A 8 -4.936 42.808 -20.081 1.00 15.37 N
ATOM 17 C5 G A 8 -5.611 43.132 -18.909 1.00 13.09 C
ATOM 18 C6 G A 8 -6.902 42.769 -18.451 1.00 13.39 C
ATOM 19 O6 G A 8 -7.745 42.055 -19.011 1.00 16.10 O
ATOM 20 N1 G A 8 -7.187 43.324 -17.204 1.00 13.23 N
ATOM 21 C2 G A 8 -6.332 44.129 -16.491 1.00 11.97 C
ATOM 22 N2 G A 8 -6.775 44.574 -15.307 1.00 11.99 N
ATOM 23 N3 G A 8 -5.123 44.477 -16.909 1.00 11.77 N
ATOM 24 C4 G A 8 -4.833 43.943 -18.119 1.00 12.06 C
ATOM 25 P U A 9 0.728 44.980 -16.101 1.00 12.53 P
ATOM 26 OP1 U A 9 1.907 44.757 -16.969 1.00 14.29 O
ATOM 27 OP2 U A 9 0.051 43.827 -15.466 1.00 13.45 O
ATOM 28 O5' U A 9 1.103 46.005 -14.937 1.00 12.66 O
TER
ATOM 1 O3' G B 16 -9.368 36.663 -15.570 1.00 10.94 O
ATOM 2 P G B 17 -9.712 38.064 -16.264 1.00 11.45 P
ATOM 3 OP1 G B 17 -11.185 38.157 -16.373 1.00 12.63 O
ATOM 4 OP2 G B 17 -8.871 38.217 -17.471 1.00 12.97 O
ATOM 5 O5' G B 17 -9.175 39.127 -15.199 1.00 10.47 O
ATOM 6 C5' G B 17 -9.713 39.197 -13.890 1.00 10.84 C
ATOM 7 C4' G B 17 -8.895 40.159 -13.051 1.00 9.89 C
ATOM 8 O4' G B 17 -7.528 39.687 -12.955 1.00 9.64 O
ATOM 9 C3' G B 17 -8.742 41.556 -13.630 1.00 9.06 C
ATOM 10 O3' G B 17 -9.895 42.339 -13.365 1.00 9.92 O
ATOM 11 C2' G B 17 -7.521 42.035 -12.855 1.00 10.01 C
ATOM 12 O2' G B 17 -7.801 42.283 -11.493 1.00 9.68 O
ATOM 13 C1' G B 17 -6.644 40.796 -12.962 1.00 9.30 C
ATOM 14 N9 G B 17 -5.845 40.768 -14.184 1.00 9.37 N
ATOM 15 C8 G B 17 -6.092 40.029 -15.315 1.00 10.07 C
ATOM 16 N7 G B 17 -5.205 40.207 -16.255 1.00 10.79 N
ATOM 17 C5 G B 17 -4.314 41.125 -15.715 1.00 10.66 C
ATOM 18 C6 G B 17 -3.146 41.697 -16.274 1.00 11.44 C
ATOM 19 O6 G B 17 -2.656 41.495 -17.393 1.00 12.57 O
ATOM 20 N1 G B 17 -2.530 42.582 -15.392 1.00 10.24 N
ATOM 21 C2 G B 17 -2.988 42.877 -14.131 1.00 10.42 C
ATOM 22 N2 G B 17 -2.257 43.759 -13.432 1.00 10.34 N
ATOM 23 N3 G B 17 -4.082 42.348 -13.596 1.00 9.64 N
ATOM 24 C4 G B 17 -4.694 41.483 -14.441 1.00 9.63 C
ATOM 25 P A B 18 -10.199 43.618 -14.278 1.00 9.50 P
ATOM 26 OP1 A B 18 -11.609 44.002 -14.050 1.00 10.55 O
ATOM 27 OP2 A B 18 -9.727 43.337 -15.651 1.00 10.74 O
ATOM 28 O5' A B 18 -9.212 44.725 -13.671 1.00 8.96 O
TER
Atoms:
OP1: (-0.163,50.173,-19.859)
OP2: (-2.173,50.709,-21.361)
C3': (-0.399,45.748,-18.335)
C1': (-2.529,44.931,-18.332)
C5': (-0.951,47.351,-20.199)
O6: (-7.745,42.055,-19.011)
O4': (-2.651,46.265,-18.793)
C8: (-3.785,43.419,-19.974)
C2: (-6.332,44.129,-16.491)
C6: (-6.902,42.769,-18.451)
C5: (-5.611,43.132,-18.909)
C4: (-4.833,43.943,-18.119)
P: (-1.566,49.936,-20.262)
C4': (-1.321,46.857,-18.815)
C2': (-1.152,44.518,-18.825)
O2': (-0.721,43.320,-18.211)
N1: (-7.187,43.324,-17.204)
N2: (-6.775,44.574,-15.307)
N3: (-5.123,44.477,-16.909)
N7: (-4.936,42.808,-20.081)
N9: (-3.656,44.128,-18.804)
O5': (-1.782,48.402,-20.668)
O3': (-0.365,45.801,-16.927)
OP2: (-2.173,50.709,-21.361)
C3': (-0.399,45.748,-18.335)
C1': (-2.529,44.931,-18.332)
C5': (-0.951,47.351,-20.199)
O6: (-7.745,42.055,-19.011)
O4': (-2.651,46.265,-18.793)
C8: (-3.785,43.419,-19.974)
C2: (-6.332,44.129,-16.491)
C6: (-6.902,42.769,-18.451)
C5: (-5.611,43.132,-18.909)
C4: (-4.833,43.943,-18.119)
P: (-1.566,49.936,-20.262)
C4': (-1.321,46.857,-18.815)
C2': (-1.152,44.518,-18.825)
O2': (-0.721,43.320,-18.211)
N1: (-7.187,43.324,-17.204)
N2: (-6.775,44.574,-15.307)
N3: (-5.123,44.477,-16.909)
N7: (-4.936,42.808,-20.081)
N9: (-3.656,44.128,-18.804)
O5': (-1.782,48.402,-20.668)
O3': (-0.365,45.801,-16.927)
OP1: (-11.185,38.157,-16.373)
OP2: (-8.871,38.217,-17.471)
C3': (-8.742,41.556,-13.630)
C1': (-6.644,40.796,-12.962)
C5': (-9.713,39.197,-13.890)
O6: (-2.656,41.495,-17.393)
O4': (-7.528,39.687,-12.955)
C8: (-6.092,40.029,-15.315)
C2: (-2.988,42.877,-14.131)
C6: (-3.146,41.697,-16.274)
C5: (-4.314,41.125,-15.715)
C4: (-4.694,41.483,-14.441)
P: (-9.712,38.064,-16.264)
C4': (-8.895,40.159,-13.051)
C2': (-7.521,42.035,-12.855)
O2': (-7.801,42.283,-11.493)
N1: (-2.530,42.582,-15.392)
N2: (-2.257,43.759,-13.432)
N3: (-4.082,42.348,-13.596)
N7: (-5.205,40.207,-16.255)
N9: (-5.845,40.768,-14.184)
O5': (-9.175,39.127,-15.199)
O3': (-9.895,42.339,-13.365)
OP2: (-8.871,38.217,-17.471)
C3': (-8.742,41.556,-13.630)
C1': (-6.644,40.796,-12.962)
C5': (-9.713,39.197,-13.890)
O6: (-2.656,41.495,-17.393)
O4': (-7.528,39.687,-12.955)
C8: (-6.092,40.029,-15.315)
C2: (-2.988,42.877,-14.131)
C6: (-3.146,41.697,-16.274)
C5: (-4.314,41.125,-15.715)
C4: (-4.694,41.483,-14.441)
P: (-9.712,38.064,-16.264)
C4': (-8.895,40.159,-13.051)
C2': (-7.521,42.035,-12.855)
O2': (-7.801,42.283,-11.493)
N1: (-2.530,42.582,-15.392)
N2: (-2.257,43.759,-13.432)
N3: (-4.082,42.348,-13.596)
N7: (-5.205,40.207,-16.255)
N9: (-5.845,40.768,-14.184)
O5': (-9.175,39.127,-15.199)
O3': (-9.895,42.339,-13.365)
Image (generated by PyMOL):