Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW4:A8:A17
Extra
PDB:
ATOM 1 O3' A A 7 8.974 2.379 5.842 1.00 11.70 O
ATOM 2 P G A 8 9.105 1.442 7.128 1.00 11.53 P
ATOM 3 OP1 G A 8 8.838 0.041 6.734 1.00 14.68 O
ATOM 4 OP2 G A 8 8.375 2.060 8.251 1.00 13.85 O
ATOM 5 O5' G A 8 10.652 1.646 7.501 1.00 13.60 O
ATOM 6 C5' G A 8 11.711 0.843 7.009 1.00 13.53 C
ATOM 7 C4' G A 8 12.196 1.226 5.626 1.00 12.36 C
ATOM 8 O4' G A 8 12.816 2.545 5.583 1.00 12.21 O
ATOM 9 C3' G A 8 13.281 0.274 5.165 1.00 11.68 C
ATOM 10 O3' G A 8 13.216 0.237 3.764 1.00 10.94 O
ATOM 11 C2' G A 8 14.528 0.997 5.656 1.00 11.80 C
ATOM 12 O2' G A 8 15.707 0.516 5.043 1.00 12.77 O
ATOM 13 C1' G A 8 14.160 2.386 5.157 1.00 11.19 C
ATOM 14 N9 G A 8 14.980 3.501 5.635 1.00 11.30 N
ATOM 15 C8 G A 8 15.723 3.616 6.786 1.00 12.20 C
ATOM 16 N7 G A 8 16.334 4.768 6.888 1.00 12.90 N
ATOM 17 C5 G A 8 15.975 5.458 5.734 1.00 12.12 C
ATOM 18 C6 G A 8 16.318 6.754 5.275 1.00 12.59 C
ATOM 19 O6 G A 8 17.043 7.598 5.816 1.00 14.49 O
ATOM 20 N1 G A 8 15.724 7.047 4.050 1.00 11.08 N
ATOM 21 C2 G A 8 14.902 6.196 3.353 1.00 10.18 C
ATOM 22 N2 G A 8 14.421 6.648 2.187 1.00 10.33 N
ATOM 23 N3 G A 8 14.576 4.983 3.770 1.00 10.08 N
ATOM 24 C4 G A 8 15.145 4.685 4.959 1.00 10.92 C
ATOM 25 P U A 9 13.997 -0.866 2.919 1.00 11.27 P
ATOM 26 OP1 U A 9 14.210 -2.061 3.766 1.00 12.54 O
ATOM 27 OP2 U A 9 15.148 -0.209 2.262 1.00 11.19 O
ATOM 28 O5' U A 9 12.949 -1.183 1.758 1.00 11.04 O
TER
ATOM 1 O3' G B 16 22.371 9.149 2.587 1.00 9.27 O
ATOM 2 P G B 17 20.955 9.467 3.267 1.00 9.86 P
ATOM 3 OP1 G B 17 20.862 10.938 3.403 1.00 11.33 O
ATOM 4 OP2 G B 17 20.789 8.600 4.457 1.00 10.82 O
ATOM 5 O5' G B 17 19.905 8.951 2.177 1.00 9.36 O
ATOM 6 C5' G B 17 19.864 9.517 0.877 1.00 9.42 C
ATOM 7 C4' G B 17 18.908 8.727 0.001 1.00 8.84 C
ATOM 8 O4' G B 17 19.368 7.358 -0.128 1.00 8.59 O
ATOM 9 C3' G B 17 17.500 8.579 0.554 1.00 8.51 C
ATOM 10 O3' G B 17 16.739 9.759 0.310 1.00 8.78 O
ATOM 11 C2' G B 17 17.017 7.373 -0.245 1.00 8.56 C
ATOM 12 O2' G B 17 16.799 7.672 -1.607 1.00 8.86 O
ATOM 13 C1' G B 17 18.249 6.485 -0.135 1.00 8.39 C
ATOM 14 N9 G B 17 18.283 5.671 1.076 1.00 8.36 N
ATOM 15 C8 G B 17 19.027 5.899 2.210 1.00 8.72 C
ATOM 16 N7 G B 17 18.850 4.999 3.135 1.00 9.30 N
ATOM 17 C5 G B 17 17.931 4.116 2.582 1.00 8.94 C
ATOM 18 C6 G B 17 17.362 2.941 3.129 1.00 9.71 C
ATOM 19 O6 G B 17 17.573 2.437 4.241 1.00 11.02 O
ATOM 20 N1 G B 17 16.471 2.337 2.247 1.00 9.14 N
ATOM 21 C2 G B 17 16.167 2.811 0.994 1.00 8.79 C
ATOM 22 N2 G B 17 15.280 2.089 0.292 1.00 9.25 N
ATOM 23 N3 G B 17 16.693 3.914 0.471 1.00 8.43 N
ATOM 24 C4 G B 17 17.567 4.516 1.316 1.00 8.41 C
ATOM 25 P A B 18 15.458 10.076 1.224 1.00 9.05 P
ATOM 26 OP1 A B 18 15.097 11.494 1.016 1.00 10.25 O
ATOM 27 OP2 A B 18 15.720 9.577 2.592 1.00 10.04 O
ATOM 28 O5' A B 18 14.346 9.110 0.596 1.00 9.01 O
TER
ATOM 2 P G A 8 9.105 1.442 7.128 1.00 11.53 P
ATOM 3 OP1 G A 8 8.838 0.041 6.734 1.00 14.68 O
ATOM 4 OP2 G A 8 8.375 2.060 8.251 1.00 13.85 O
ATOM 5 O5' G A 8 10.652 1.646 7.501 1.00 13.60 O
ATOM 6 C5' G A 8 11.711 0.843 7.009 1.00 13.53 C
ATOM 7 C4' G A 8 12.196 1.226 5.626 1.00 12.36 C
ATOM 8 O4' G A 8 12.816 2.545 5.583 1.00 12.21 O
ATOM 9 C3' G A 8 13.281 0.274 5.165 1.00 11.68 C
ATOM 10 O3' G A 8 13.216 0.237 3.764 1.00 10.94 O
ATOM 11 C2' G A 8 14.528 0.997 5.656 1.00 11.80 C
ATOM 12 O2' G A 8 15.707 0.516 5.043 1.00 12.77 O
ATOM 13 C1' G A 8 14.160 2.386 5.157 1.00 11.19 C
ATOM 14 N9 G A 8 14.980 3.501 5.635 1.00 11.30 N
ATOM 15 C8 G A 8 15.723 3.616 6.786 1.00 12.20 C
ATOM 16 N7 G A 8 16.334 4.768 6.888 1.00 12.90 N
ATOM 17 C5 G A 8 15.975 5.458 5.734 1.00 12.12 C
ATOM 18 C6 G A 8 16.318 6.754 5.275 1.00 12.59 C
ATOM 19 O6 G A 8 17.043 7.598 5.816 1.00 14.49 O
ATOM 20 N1 G A 8 15.724 7.047 4.050 1.00 11.08 N
ATOM 21 C2 G A 8 14.902 6.196 3.353 1.00 10.18 C
ATOM 22 N2 G A 8 14.421 6.648 2.187 1.00 10.33 N
ATOM 23 N3 G A 8 14.576 4.983 3.770 1.00 10.08 N
ATOM 24 C4 G A 8 15.145 4.685 4.959 1.00 10.92 C
ATOM 25 P U A 9 13.997 -0.866 2.919 1.00 11.27 P
ATOM 26 OP1 U A 9 14.210 -2.061 3.766 1.00 12.54 O
ATOM 27 OP2 U A 9 15.148 -0.209 2.262 1.00 11.19 O
ATOM 28 O5' U A 9 12.949 -1.183 1.758 1.00 11.04 O
TER
ATOM 1 O3' G B 16 22.371 9.149 2.587 1.00 9.27 O
ATOM 2 P G B 17 20.955 9.467 3.267 1.00 9.86 P
ATOM 3 OP1 G B 17 20.862 10.938 3.403 1.00 11.33 O
ATOM 4 OP2 G B 17 20.789 8.600 4.457 1.00 10.82 O
ATOM 5 O5' G B 17 19.905 8.951 2.177 1.00 9.36 O
ATOM 6 C5' G B 17 19.864 9.517 0.877 1.00 9.42 C
ATOM 7 C4' G B 17 18.908 8.727 0.001 1.00 8.84 C
ATOM 8 O4' G B 17 19.368 7.358 -0.128 1.00 8.59 O
ATOM 9 C3' G B 17 17.500 8.579 0.554 1.00 8.51 C
ATOM 10 O3' G B 17 16.739 9.759 0.310 1.00 8.78 O
ATOM 11 C2' G B 17 17.017 7.373 -0.245 1.00 8.56 C
ATOM 12 O2' G B 17 16.799 7.672 -1.607 1.00 8.86 O
ATOM 13 C1' G B 17 18.249 6.485 -0.135 1.00 8.39 C
ATOM 14 N9 G B 17 18.283 5.671 1.076 1.00 8.36 N
ATOM 15 C8 G B 17 19.027 5.899 2.210 1.00 8.72 C
ATOM 16 N7 G B 17 18.850 4.999 3.135 1.00 9.30 N
ATOM 17 C5 G B 17 17.931 4.116 2.582 1.00 8.94 C
ATOM 18 C6 G B 17 17.362 2.941 3.129 1.00 9.71 C
ATOM 19 O6 G B 17 17.573 2.437 4.241 1.00 11.02 O
ATOM 20 N1 G B 17 16.471 2.337 2.247 1.00 9.14 N
ATOM 21 C2 G B 17 16.167 2.811 0.994 1.00 8.79 C
ATOM 22 N2 G B 17 15.280 2.089 0.292 1.00 9.25 N
ATOM 23 N3 G B 17 16.693 3.914 0.471 1.00 8.43 N
ATOM 24 C4 G B 17 17.567 4.516 1.316 1.00 8.41 C
ATOM 25 P A B 18 15.458 10.076 1.224 1.00 9.05 P
ATOM 26 OP1 A B 18 15.097 11.494 1.016 1.00 10.25 O
ATOM 27 OP2 A B 18 15.720 9.577 2.592 1.00 10.04 O
ATOM 28 O5' A B 18 14.346 9.110 0.596 1.00 9.01 O
TER
Atoms:
OP1: (8.838,0.041,6.734)
OP2: (8.375,2.060,8.251)
C3': (13.281,0.274,5.165)
C1': (14.160,2.386,5.157)
C5': (11.711,0.843,7.009)
O6: (17.043,7.598,5.816)
O4': (12.816,2.545,5.583)
C8: (15.723,3.616,6.786)
C2: (14.902,6.196,3.353)
C6: (16.318,6.754,5.275)
C5: (15.975,5.458,5.734)
C4: (15.145,4.685,4.959)
P: (9.105,1.442,7.128)
C4': (12.196,1.226,5.626)
C2': (14.528,0.997,5.656)
O2': (15.707,0.516,5.043)
N1: (15.724,7.047,4.050)
N2: (14.421,6.648,2.187)
N3: (14.576,4.983,3.770)
N7: (16.334,4.768,6.888)
N9: (14.980,3.501,5.635)
O5': (10.652,1.646,7.501)
O3': (13.216,0.237,3.764)
OP2: (8.375,2.060,8.251)
C3': (13.281,0.274,5.165)
C1': (14.160,2.386,5.157)
C5': (11.711,0.843,7.009)
O6: (17.043,7.598,5.816)
O4': (12.816,2.545,5.583)
C8: (15.723,3.616,6.786)
C2: (14.902,6.196,3.353)
C6: (16.318,6.754,5.275)
C5: (15.975,5.458,5.734)
C4: (15.145,4.685,4.959)
P: (9.105,1.442,7.128)
C4': (12.196,1.226,5.626)
C2': (14.528,0.997,5.656)
O2': (15.707,0.516,5.043)
N1: (15.724,7.047,4.050)
N2: (14.421,6.648,2.187)
N3: (14.576,4.983,3.770)
N7: (16.334,4.768,6.888)
N9: (14.980,3.501,5.635)
O5': (10.652,1.646,7.501)
O3': (13.216,0.237,3.764)
OP1: (20.862,10.938,3.403)
OP2: (20.789,8.600,4.457)
C3': (17.500,8.579,0.554)
C1': (18.249,6.485,-0.135)
C5': (19.864,9.517,0.877)
O6: (17.573,2.437,4.241)
O4': (19.368,7.358,-0.128)
C8: (19.027,5.899,2.210)
C2: (16.167,2.811,0.994)
C6: (17.362,2.941,3.129)
C5: (17.931,4.116,2.582)
C4: (17.567,4.516,1.316)
P: (20.955,9.467,3.267)
C4': (18.908,8.727,0.001)
C2': (17.017,7.373,-0.245)
O2': (16.799,7.672,-1.607)
N1: (16.471,2.337,2.247)
N2: (15.280,2.089,0.292)
N3: (16.693,3.914,0.471)
N7: (18.850,4.999,3.135)
N9: (18.283,5.671,1.076)
O5': (19.905,8.951,2.177)
O3': (16.739,9.759,0.310)
OP2: (20.789,8.600,4.457)
C3': (17.500,8.579,0.554)
C1': (18.249,6.485,-0.135)
C5': (19.864,9.517,0.877)
O6: (17.573,2.437,4.241)
O4': (19.368,7.358,-0.128)
C8: (19.027,5.899,2.210)
C2: (16.167,2.811,0.994)
C6: (17.362,2.941,3.129)
C5: (17.931,4.116,2.582)
C4: (17.567,4.516,1.316)
P: (20.955,9.467,3.267)
C4': (18.908,8.727,0.001)
C2': (17.017,7.373,-0.245)
O2': (16.799,7.672,-1.607)
N1: (16.471,2.337,2.247)
N2: (15.280,2.089,0.292)
N3: (16.693,3.914,0.471)
N7: (18.850,4.999,3.135)
N9: (18.283,5.671,1.076)
O5': (19.905,8.951,2.177)
O3': (16.739,9.759,0.310)
Image (generated by PyMOL):