Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW6:A8:A17
Extra
PDB:
ATOM 1 O3' A A 7 -2.319 50.397 -18.977 0.55 11.46 O
ATOM 2 P G A 8 -1.350 50.238 -20.237 1.00 11.44 P
ATOM 3 OP1 G A 8 0.043 50.519 -19.826 1.00 15.48 O
ATOM 4 OP2 G A 8 -1.961 50.939 -21.380 1.00 14.36 O
ATOM 5 O5' G A 8 -1.574 48.691 -20.602 1.00 14.95 O
ATOM 6 C5' G A 8 -0.805 47.609 -20.124 1.00 14.79 C
ATOM 7 C4' G A 8 -1.203 47.102 -18.754 1.00 13.16 C
ATOM 8 O4' G A 8 -2.516 46.465 -18.713 1.00 12.61 O
ATOM 9 C3' G A 8 -0.237 46.018 -18.325 1.00 11.81 C
ATOM 10 O3' G A 8 -0.187 46.057 -16.923 1.00 10.90 O
ATOM 11 C2' G A 8 -0.952 44.777 -18.843 1.00 11.83 C
ATOM 12 O2' G A 8 -0.443 43.591 -18.271 1.00 12.69 O
ATOM 13 C1' G A 8 -2.337 45.116 -18.317 1.00 11.16 C
ATOM 14 N9 G A 8 -3.447 44.288 -18.791 1.00 10.97 N
ATOM 15 C8 G A 8 -3.561 43.540 -19.938 1.00 12.37 C
ATOM 16 N7 G A 8 -4.710 42.921 -20.030 1.00 12.83 N
ATOM 17 C5 G A 8 -5.397 43.279 -18.876 1.00 11.94 C
ATOM 18 C6 G A 8 -6.688 42.928 -18.413 1.00 12.33 C
ATOM 19 O6 G A 8 -7.527 42.194 -18.953 1.00 14.20 O
ATOM 20 N1 G A 8 -6.980 43.525 -17.187 1.00 11.08 N
ATOM 21 C2 G A 8 -6.129 44.358 -16.497 1.00 10.44 C
ATOM 22 N2 G A 8 -6.578 44.844 -15.331 1.00 10.58 N
ATOM 23 N3 G A 8 -4.919 44.691 -16.922 1.00 9.97 N
ATOM 24 C4 G A 8 -4.626 44.118 -18.109 1.00 10.50 C
ATOM 25 P U A 9 0.938 45.277 -16.104 1.00 10.80 P
ATOM 26 OP1 U A 9 2.118 45.079 -16.973 1.00 12.06 O
ATOM 27 OP2 U A 9 0.306 44.123 -15.428 1.00 10.72 O
ATOM 28 O5' U A 9 1.266 46.327 -14.946 1.00 10.69 O
TER
ATOM 1 O3' G B 16 -9.024 36.949 -15.687 1.00 8.58 O
ATOM 2 P G B 17 -9.335 38.365 -16.363 1.00 9.19 P
ATOM 3 OP1 G B 17 -10.802 38.457 -16.498 1.00 10.15 O
ATOM 4 OP2 G B 17 -8.466 38.536 -17.548 1.00 10.02 O
ATOM 5 O5' G B 17 -8.828 39.411 -15.261 1.00 8.77 O
ATOM 6 C5' G B 17 -9.389 39.433 -13.957 1.00 9.08 C
ATOM 7 C4' G B 17 -8.600 40.390 -13.084 1.00 8.45 C
ATOM 8 O4' G B 17 -7.226 39.941 -12.958 1.00 7.90 O
ATOM 9 C3' G B 17 -8.459 41.794 -13.644 1.00 7.94 C
ATOM 10 O3' G B 17 -9.641 42.547 -13.401 1.00 8.28 O
ATOM 11 C2' G B 17 -7.257 42.287 -12.847 1.00 8.32 C
ATOM 12 O2' G B 17 -7.561 42.509 -11.486 1.00 8.59 O
ATOM 13 C1' G B 17 -6.360 41.063 -12.947 1.00 7.96 C
ATOM 14 N9 G B 17 -5.551 41.035 -14.160 1.00 8.15 N
ATOM 15 C8 G B 17 -5.791 40.297 -15.293 1.00 8.53 C
ATOM 16 N7 G B 17 -4.897 40.473 -16.226 1.00 8.75 N
ATOM 17 C5 G B 17 -4.006 41.387 -15.677 1.00 8.50 C
ATOM 18 C6 G B 17 -2.832 41.959 -16.222 1.00 9.01 C
ATOM 19 O6 G B 17 -2.325 41.763 -17.335 1.00 9.90 O
ATOM 20 N1 G B 17 -2.227 42.841 -15.333 1.00 8.66 N
ATOM 21 C2 G B 17 -2.696 43.138 -14.078 1.00 8.30 C
ATOM 22 N2 G B 17 -1.966 44.020 -13.377 1.00 9.13 N
ATOM 23 N3 G B 17 -3.799 42.613 -13.554 1.00 7.97 N
ATOM 24 C4 G B 17 -4.398 41.745 -14.406 1.00 7.79 C
ATOM 25 P A B 18 -9.982 43.809 -14.327 1.00 8.93 P
ATOM 26 OP1 A B 18 -11.400 44.149 -14.100 1.00 10.26 O
ATOM 27 OP2 A B 18 -9.500 43.541 -15.700 1.00 10.10 O
ATOM 28 O5' A B 18 -9.029 44.950 -13.732 1.00 9.13 O
TER
ATOM 2 P G A 8 -1.350 50.238 -20.237 1.00 11.44 P
ATOM 3 OP1 G A 8 0.043 50.519 -19.826 1.00 15.48 O
ATOM 4 OP2 G A 8 -1.961 50.939 -21.380 1.00 14.36 O
ATOM 5 O5' G A 8 -1.574 48.691 -20.602 1.00 14.95 O
ATOM 6 C5' G A 8 -0.805 47.609 -20.124 1.00 14.79 C
ATOM 7 C4' G A 8 -1.203 47.102 -18.754 1.00 13.16 C
ATOM 8 O4' G A 8 -2.516 46.465 -18.713 1.00 12.61 O
ATOM 9 C3' G A 8 -0.237 46.018 -18.325 1.00 11.81 C
ATOM 10 O3' G A 8 -0.187 46.057 -16.923 1.00 10.90 O
ATOM 11 C2' G A 8 -0.952 44.777 -18.843 1.00 11.83 C
ATOM 12 O2' G A 8 -0.443 43.591 -18.271 1.00 12.69 O
ATOM 13 C1' G A 8 -2.337 45.116 -18.317 1.00 11.16 C
ATOM 14 N9 G A 8 -3.447 44.288 -18.791 1.00 10.97 N
ATOM 15 C8 G A 8 -3.561 43.540 -19.938 1.00 12.37 C
ATOM 16 N7 G A 8 -4.710 42.921 -20.030 1.00 12.83 N
ATOM 17 C5 G A 8 -5.397 43.279 -18.876 1.00 11.94 C
ATOM 18 C6 G A 8 -6.688 42.928 -18.413 1.00 12.33 C
ATOM 19 O6 G A 8 -7.527 42.194 -18.953 1.00 14.20 O
ATOM 20 N1 G A 8 -6.980 43.525 -17.187 1.00 11.08 N
ATOM 21 C2 G A 8 -6.129 44.358 -16.497 1.00 10.44 C
ATOM 22 N2 G A 8 -6.578 44.844 -15.331 1.00 10.58 N
ATOM 23 N3 G A 8 -4.919 44.691 -16.922 1.00 9.97 N
ATOM 24 C4 G A 8 -4.626 44.118 -18.109 1.00 10.50 C
ATOM 25 P U A 9 0.938 45.277 -16.104 1.00 10.80 P
ATOM 26 OP1 U A 9 2.118 45.079 -16.973 1.00 12.06 O
ATOM 27 OP2 U A 9 0.306 44.123 -15.428 1.00 10.72 O
ATOM 28 O5' U A 9 1.266 46.327 -14.946 1.00 10.69 O
TER
ATOM 1 O3' G B 16 -9.024 36.949 -15.687 1.00 8.58 O
ATOM 2 P G B 17 -9.335 38.365 -16.363 1.00 9.19 P
ATOM 3 OP1 G B 17 -10.802 38.457 -16.498 1.00 10.15 O
ATOM 4 OP2 G B 17 -8.466 38.536 -17.548 1.00 10.02 O
ATOM 5 O5' G B 17 -8.828 39.411 -15.261 1.00 8.77 O
ATOM 6 C5' G B 17 -9.389 39.433 -13.957 1.00 9.08 C
ATOM 7 C4' G B 17 -8.600 40.390 -13.084 1.00 8.45 C
ATOM 8 O4' G B 17 -7.226 39.941 -12.958 1.00 7.90 O
ATOM 9 C3' G B 17 -8.459 41.794 -13.644 1.00 7.94 C
ATOM 10 O3' G B 17 -9.641 42.547 -13.401 1.00 8.28 O
ATOM 11 C2' G B 17 -7.257 42.287 -12.847 1.00 8.32 C
ATOM 12 O2' G B 17 -7.561 42.509 -11.486 1.00 8.59 O
ATOM 13 C1' G B 17 -6.360 41.063 -12.947 1.00 7.96 C
ATOM 14 N9 G B 17 -5.551 41.035 -14.160 1.00 8.15 N
ATOM 15 C8 G B 17 -5.791 40.297 -15.293 1.00 8.53 C
ATOM 16 N7 G B 17 -4.897 40.473 -16.226 1.00 8.75 N
ATOM 17 C5 G B 17 -4.006 41.387 -15.677 1.00 8.50 C
ATOM 18 C6 G B 17 -2.832 41.959 -16.222 1.00 9.01 C
ATOM 19 O6 G B 17 -2.325 41.763 -17.335 1.00 9.90 O
ATOM 20 N1 G B 17 -2.227 42.841 -15.333 1.00 8.66 N
ATOM 21 C2 G B 17 -2.696 43.138 -14.078 1.00 8.30 C
ATOM 22 N2 G B 17 -1.966 44.020 -13.377 1.00 9.13 N
ATOM 23 N3 G B 17 -3.799 42.613 -13.554 1.00 7.97 N
ATOM 24 C4 G B 17 -4.398 41.745 -14.406 1.00 7.79 C
ATOM 25 P A B 18 -9.982 43.809 -14.327 1.00 8.93 P
ATOM 26 OP1 A B 18 -11.400 44.149 -14.100 1.00 10.26 O
ATOM 27 OP2 A B 18 -9.500 43.541 -15.700 1.00 10.10 O
ATOM 28 O5' A B 18 -9.029 44.950 -13.732 1.00 9.13 O
TER
Atoms:
OP1: (0.043,50.519,-19.826)
OP2: (-1.961,50.939,-21.380)
C3': (-0.237,46.018,-18.325)
C1': (-2.337,45.116,-18.317)
C5': (-0.805,47.609,-20.124)
O6: (-7.527,42.194,-18.953)
O4': (-2.516,46.465,-18.713)
C8: (-3.561,43.540,-19.938)
C2: (-6.129,44.358,-16.497)
C6: (-6.688,42.928,-18.413)
C5: (-5.397,43.279,-18.876)
C4: (-4.626,44.118,-18.109)
P: (-1.350,50.238,-20.237)
C4': (-1.203,47.102,-18.754)
C2': (-0.952,44.777,-18.843)
O2': (-0.443,43.591,-18.271)
N1: (-6.980,43.525,-17.187)
N2: (-6.578,44.844,-15.331)
N3: (-4.919,44.691,-16.922)
N7: (-4.710,42.921,-20.030)
N9: (-3.447,44.288,-18.791)
O5': (-1.574,48.691,-20.602)
O3': (-0.187,46.057,-16.923)
OP2: (-1.961,50.939,-21.380)
C3': (-0.237,46.018,-18.325)
C1': (-2.337,45.116,-18.317)
C5': (-0.805,47.609,-20.124)
O6: (-7.527,42.194,-18.953)
O4': (-2.516,46.465,-18.713)
C8: (-3.561,43.540,-19.938)
C2: (-6.129,44.358,-16.497)
C6: (-6.688,42.928,-18.413)
C5: (-5.397,43.279,-18.876)
C4: (-4.626,44.118,-18.109)
P: (-1.350,50.238,-20.237)
C4': (-1.203,47.102,-18.754)
C2': (-0.952,44.777,-18.843)
O2': (-0.443,43.591,-18.271)
N1: (-6.980,43.525,-17.187)
N2: (-6.578,44.844,-15.331)
N3: (-4.919,44.691,-16.922)
N7: (-4.710,42.921,-20.030)
N9: (-3.447,44.288,-18.791)
O5': (-1.574,48.691,-20.602)
O3': (-0.187,46.057,-16.923)
OP1: (-10.802,38.457,-16.498)
OP2: (-8.466,38.536,-17.548)
C3': (-8.459,41.794,-13.644)
C1': (-6.360,41.063,-12.947)
C5': (-9.389,39.433,-13.957)
O6: (-2.325,41.763,-17.335)
O4': (-7.226,39.941,-12.958)
C8: (-5.791,40.297,-15.293)
C2: (-2.696,43.138,-14.078)
C6: (-2.832,41.959,-16.222)
C5: (-4.006,41.387,-15.677)
C4: (-4.398,41.745,-14.406)
P: (-9.335,38.365,-16.363)
C4': (-8.600,40.390,-13.084)
C2': (-7.257,42.287,-12.847)
O2': (-7.561,42.509,-11.486)
N1: (-2.227,42.841,-15.333)
N2: (-1.966,44.020,-13.377)
N3: (-3.799,42.613,-13.554)
N7: (-4.897,40.473,-16.226)
N9: (-5.551,41.035,-14.160)
O5': (-8.828,39.411,-15.261)
O3': (-9.641,42.547,-13.401)
OP2: (-8.466,38.536,-17.548)
C3': (-8.459,41.794,-13.644)
C1': (-6.360,41.063,-12.947)
C5': (-9.389,39.433,-13.957)
O6: (-2.325,41.763,-17.335)
O4': (-7.226,39.941,-12.958)
C8: (-5.791,40.297,-15.293)
C2: (-2.696,43.138,-14.078)
C6: (-2.832,41.959,-16.222)
C5: (-4.006,41.387,-15.677)
C4: (-4.398,41.745,-14.406)
P: (-9.335,38.365,-16.363)
C4': (-8.600,40.390,-13.084)
C2': (-7.257,42.287,-12.847)
O2': (-7.561,42.509,-11.486)
N1: (-2.227,42.841,-15.333)
N2: (-1.966,44.020,-13.377)
N3: (-3.799,42.613,-13.554)
N7: (-4.897,40.473,-16.226)
N9: (-5.551,41.035,-14.160)
O5': (-8.828,39.411,-15.261)
O3': (-9.641,42.547,-13.401)
Image (generated by PyMOL):