Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW7:A8:A17
Extra
PDB:
ATOM 1 O3' A A 7 -8.737 -2.499 5.888 1.00 13.12 O
ATOM 2 P G A 8 -8.810 -1.349 6.992 1.00 13.86 P
ATOM 3 OP1 G A 8 -7.867 -0.271 6.602 1.00 16.76 O
ATOM 4 OP2 G A 8 -8.647 -1.994 8.314 1.00 14.43 O
ATOM 5 O5' G A 8 -10.282 -0.746 6.839 1.00 16.03 O
ATOM 6 C5' G A 8 -11.437 -1.551 6.947 1.00 15.67 C
ATOM 7 C4' G A 8 -12.116 -1.643 5.595 1.00 12.74 C
ATOM 8 O4' G A 8 -12.854 -2.887 5.549 1.00 11.66 O
ATOM 9 C3' G A 8 -13.137 -0.557 5.264 1.00 12.02 C
ATOM 10 O3' G A 8 -13.259 -0.505 3.851 1.00 10.11 O
ATOM 11 C2' G A 8 -14.384 -1.164 5.882 1.00 12.97 C
ATOM 12 O2' G A 8 -15.584 -0.595 5.399 1.00 15.16 O
ATOM 13 C1' G A 8 -14.213 -2.574 5.343 1.00 11.29 C
ATOM 14 N9 G A 8 -15.012 -3.578 6.021 1.00 12.56 N
ATOM 15 C8 G A 8 -15.576 -3.526 7.273 1.00 15.01 C
ATOM 16 N7 G A 8 -16.235 -4.609 7.578 1.00 15.70 N
ATOM 17 C5 G A 8 -16.092 -5.421 6.458 1.00 14.38 C
ATOM 18 C6 G A 8 -16.583 -6.718 6.195 1.00 15.05 C
ATOM 19 O6 G A 8 -17.272 -7.439 6.930 1.00 16.72 O
ATOM 20 N1 G A 8 -16.197 -7.163 4.931 1.00 12.68 N
ATOM 21 C2 G A 8 -15.433 -6.449 4.035 1.00 13.12 C
ATOM 22 N2 G A 8 -15.156 -7.034 2.862 1.00 13.90 N
ATOM 23 N3 G A 8 -14.965 -5.235 4.271 1.00 12.35 N
ATOM 24 C4 G A 8 -15.338 -4.796 5.495 1.00 12.39 C
TER
ATOM 1 O3' G B 16 -22.355 -9.436 2.439 1.00 11.92 O
ATOM 2 P G B 17 -20.941 -9.795 3.091 1.00 12.66 P
ATOM 3 OP1 G B 17 -20.850 -11.269 3.178 1.00 13.92 O
ATOM 4 OP2 G B 17 -20.768 -8.967 4.305 1.00 14.17 O
ATOM 5 O5' G B 17 -19.892 -9.250 2.016 1.00 11.80 O
ATOM 6 C5' G B 17 -19.826 -9.789 0.706 1.00 11.19 C
ATOM 7 C4' G B 17 -18.871 -8.962 -0.129 1.00 10.13 C
ATOM 8 O4' G B 17 -19.342 -7.593 -0.201 1.00 9.81 O
ATOM 9 C3' G B 17 -17.475 -8.819 0.456 1.00 9.26 C
ATOM 10 O3' G B 17 -16.704 -9.981 0.177 1.00 9.60 O
ATOM 11 C2' G B 17 -16.992 -7.590 -0.302 1.00 9.66 C
ATOM 12 O2' G B 17 -16.738 -7.858 -1.665 1.00 9.18 O
ATOM 13 C1' G B 17 -18.232 -6.711 -0.193 1.00 9.28 C
ATOM 14 N9 G B 17 -18.258 -5.918 1.033 1.00 9.17 N
ATOM 15 C8 G B 17 -18.974 -6.185 2.176 1.00 10.05 C
ATOM 16 N7 G B 17 -18.794 -5.299 3.115 1.00 10.66 N
ATOM 17 C5 G B 17 -17.901 -4.389 2.564 1.00 10.67 C
ATOM 18 C6 G B 17 -17.340 -3.212 3.115 1.00 11.07 C
ATOM 19 O6 G B 17 -17.525 -2.726 4.238 1.00 12.44 O
ATOM 20 N1 G B 17 -16.482 -2.577 2.223 1.00 10.35 N
ATOM 21 C2 G B 17 -16.201 -3.022 0.954 1.00 9.38 C
ATOM 22 N2 G B 17 -15.343 -2.270 0.247 1.00 9.41 N
ATOM 23 N3 G B 17 -16.719 -4.125 0.423 1.00 9.46 N
ATOM 24 C4 G B 17 -17.559 -4.756 1.282 1.00 9.39 C
ATOM 25 P A B 18 -15.423 -10.320 1.073 1.00 8.85 P
ATOM 26 OP1 A B 18 -15.070 -11.731 0.806 1.00 10.29 O
ATOM 27 OP2 A B 18 -15.682 -9.878 2.461 1.00 10.03 O
ATOM 28 O5' A B 18 -14.307 -9.344 0.468 1.00 8.37 O
TER
ATOM 2 P G A 8 -8.810 -1.349 6.992 1.00 13.86 P
ATOM 3 OP1 G A 8 -7.867 -0.271 6.602 1.00 16.76 O
ATOM 4 OP2 G A 8 -8.647 -1.994 8.314 1.00 14.43 O
ATOM 5 O5' G A 8 -10.282 -0.746 6.839 1.00 16.03 O
ATOM 6 C5' G A 8 -11.437 -1.551 6.947 1.00 15.67 C
ATOM 7 C4' G A 8 -12.116 -1.643 5.595 1.00 12.74 C
ATOM 8 O4' G A 8 -12.854 -2.887 5.549 1.00 11.66 O
ATOM 9 C3' G A 8 -13.137 -0.557 5.264 1.00 12.02 C
ATOM 10 O3' G A 8 -13.259 -0.505 3.851 1.00 10.11 O
ATOM 11 C2' G A 8 -14.384 -1.164 5.882 1.00 12.97 C
ATOM 12 O2' G A 8 -15.584 -0.595 5.399 1.00 15.16 O
ATOM 13 C1' G A 8 -14.213 -2.574 5.343 1.00 11.29 C
ATOM 14 N9 G A 8 -15.012 -3.578 6.021 1.00 12.56 N
ATOM 15 C8 G A 8 -15.576 -3.526 7.273 1.00 15.01 C
ATOM 16 N7 G A 8 -16.235 -4.609 7.578 1.00 15.70 N
ATOM 17 C5 G A 8 -16.092 -5.421 6.458 1.00 14.38 C
ATOM 18 C6 G A 8 -16.583 -6.718 6.195 1.00 15.05 C
ATOM 19 O6 G A 8 -17.272 -7.439 6.930 1.00 16.72 O
ATOM 20 N1 G A 8 -16.197 -7.163 4.931 1.00 12.68 N
ATOM 21 C2 G A 8 -15.433 -6.449 4.035 1.00 13.12 C
ATOM 22 N2 G A 8 -15.156 -7.034 2.862 1.00 13.90 N
ATOM 23 N3 G A 8 -14.965 -5.235 4.271 1.00 12.35 N
ATOM 24 C4 G A 8 -15.338 -4.796 5.495 1.00 12.39 C
TER
ATOM 1 O3' G B 16 -22.355 -9.436 2.439 1.00 11.92 O
ATOM 2 P G B 17 -20.941 -9.795 3.091 1.00 12.66 P
ATOM 3 OP1 G B 17 -20.850 -11.269 3.178 1.00 13.92 O
ATOM 4 OP2 G B 17 -20.768 -8.967 4.305 1.00 14.17 O
ATOM 5 O5' G B 17 -19.892 -9.250 2.016 1.00 11.80 O
ATOM 6 C5' G B 17 -19.826 -9.789 0.706 1.00 11.19 C
ATOM 7 C4' G B 17 -18.871 -8.962 -0.129 1.00 10.13 C
ATOM 8 O4' G B 17 -19.342 -7.593 -0.201 1.00 9.81 O
ATOM 9 C3' G B 17 -17.475 -8.819 0.456 1.00 9.26 C
ATOM 10 O3' G B 17 -16.704 -9.981 0.177 1.00 9.60 O
ATOM 11 C2' G B 17 -16.992 -7.590 -0.302 1.00 9.66 C
ATOM 12 O2' G B 17 -16.738 -7.858 -1.665 1.00 9.18 O
ATOM 13 C1' G B 17 -18.232 -6.711 -0.193 1.00 9.28 C
ATOM 14 N9 G B 17 -18.258 -5.918 1.033 1.00 9.17 N
ATOM 15 C8 G B 17 -18.974 -6.185 2.176 1.00 10.05 C
ATOM 16 N7 G B 17 -18.794 -5.299 3.115 1.00 10.66 N
ATOM 17 C5 G B 17 -17.901 -4.389 2.564 1.00 10.67 C
ATOM 18 C6 G B 17 -17.340 -3.212 3.115 1.00 11.07 C
ATOM 19 O6 G B 17 -17.525 -2.726 4.238 1.00 12.44 O
ATOM 20 N1 G B 17 -16.482 -2.577 2.223 1.00 10.35 N
ATOM 21 C2 G B 17 -16.201 -3.022 0.954 1.00 9.38 C
ATOM 22 N2 G B 17 -15.343 -2.270 0.247 1.00 9.41 N
ATOM 23 N3 G B 17 -16.719 -4.125 0.423 1.00 9.46 N
ATOM 24 C4 G B 17 -17.559 -4.756 1.282 1.00 9.39 C
ATOM 25 P A B 18 -15.423 -10.320 1.073 1.00 8.85 P
ATOM 26 OP1 A B 18 -15.070 -11.731 0.806 1.00 10.29 O
ATOM 27 OP2 A B 18 -15.682 -9.878 2.461 1.00 10.03 O
ATOM 28 O5' A B 18 -14.307 -9.344 0.468 1.00 8.37 O
TER
Atoms:
OP1: (-7.867,-0.271,6.602)
OP2: (-8.647,-1.994,8.314)
C3': (-13.137,-0.557,5.264)
C1': (-14.213,-2.574,5.343)
C5': (-11.437,-1.551,6.947)
O6: (-17.272,-7.439,6.930)
O4': (-12.854,-2.887,5.549)
C8: (-15.576,-3.526,7.273)
C2: (-15.433,-6.449,4.035)
C6: (-16.583,-6.718,6.195)
C5: (-16.092,-5.421,6.458)
C4: (-15.338,-4.796,5.495)
P: (-8.810,-1.349,6.992)
C4': (-12.116,-1.643,5.595)
C2': (-14.384,-1.164,5.882)
O2': (-15.584,-0.595,5.399)
N1: (-16.197,-7.163,4.931)
N2: (-15.156,-7.034,2.862)
N3: (-14.965,-5.235,4.271)
N7: (-16.235,-4.609,7.578)
N9: (-15.012,-3.578,6.021)
O5': (-10.282,-0.746,6.839)
O3': (-13.259,-0.505,3.851)
OP2: (-8.647,-1.994,8.314)
C3': (-13.137,-0.557,5.264)
C1': (-14.213,-2.574,5.343)
C5': (-11.437,-1.551,6.947)
O6: (-17.272,-7.439,6.930)
O4': (-12.854,-2.887,5.549)
C8: (-15.576,-3.526,7.273)
C2: (-15.433,-6.449,4.035)
C6: (-16.583,-6.718,6.195)
C5: (-16.092,-5.421,6.458)
C4: (-15.338,-4.796,5.495)
P: (-8.810,-1.349,6.992)
C4': (-12.116,-1.643,5.595)
C2': (-14.384,-1.164,5.882)
O2': (-15.584,-0.595,5.399)
N1: (-16.197,-7.163,4.931)
N2: (-15.156,-7.034,2.862)
N3: (-14.965,-5.235,4.271)
N7: (-16.235,-4.609,7.578)
N9: (-15.012,-3.578,6.021)
O5': (-10.282,-0.746,6.839)
O3': (-13.259,-0.505,3.851)
OP1: (-20.850,-11.269,3.178)
OP2: (-20.768,-8.967,4.305)
C3': (-17.475,-8.819,0.456)
C1': (-18.232,-6.711,-0.193)
C5': (-19.826,-9.789,0.706)
O6: (-17.525,-2.726,4.238)
O4': (-19.342,-7.593,-0.201)
C8: (-18.974,-6.185,2.176)
C2: (-16.201,-3.022,0.954)
C6: (-17.340,-3.212,3.115)
C5: (-17.901,-4.389,2.564)
C4: (-17.559,-4.756,1.282)
P: (-20.941,-9.795,3.091)
C4': (-18.871,-8.962,-0.129)
C2': (-16.992,-7.590,-0.302)
O2': (-16.738,-7.858,-1.665)
N1: (-16.482,-2.577,2.223)
N2: (-15.343,-2.270,0.247)
N3: (-16.719,-4.125,0.423)
N7: (-18.794,-5.299,3.115)
N9: (-18.258,-5.918,1.033)
O5': (-19.892,-9.250,2.016)
O3': (-16.704,-9.981,0.177)
OP2: (-20.768,-8.967,4.305)
C3': (-17.475,-8.819,0.456)
C1': (-18.232,-6.711,-0.193)
C5': (-19.826,-9.789,0.706)
O6: (-17.525,-2.726,4.238)
O4': (-19.342,-7.593,-0.201)
C8: (-18.974,-6.185,2.176)
C2: (-16.201,-3.022,0.954)
C6: (-17.340,-3.212,3.115)
C5: (-17.901,-4.389,2.564)
C4: (-17.559,-4.756,1.282)
P: (-20.941,-9.795,3.091)
C4': (-18.871,-8.962,-0.129)
C2': (-16.992,-7.590,-0.302)
O2': (-16.738,-7.858,-1.665)
N1: (-16.482,-2.577,2.223)
N2: (-15.343,-2.270,0.247)
N3: (-16.719,-4.125,0.423)
N7: (-18.794,-5.299,3.115)
N9: (-18.258,-5.918,1.033)
O5': (-19.892,-9.250,2.016)
O3': (-16.704,-9.981,0.177)
Image (generated by PyMOL):