Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A2560:A2569
Extra
PDB:
ATOM 1 O3' A A2559 62.794 -46.577 151.890 1.00117.78 O
ATOM 2 P G A2560 64.215 -46.455 152.601 1.00121.00 P
ATOM 3 OP1 G A2560 64.654 -45.044 152.440 1.00120.28 O
ATOM 4 OP2 G A2560 65.104 -47.569 152.143 1.00118.54 O
ATOM 5 O5' G A2560 63.875 -46.689 154.139 1.00125.42 O
ATOM 6 C5' G A2560 62.662 -46.190 154.715 1.00127.11 C
ATOM 7 C4' G A2560 61.531 -47.144 154.414 1.00129.97 C
ATOM 8 O4' G A2560 62.008 -48.498 154.606 1.00133.72 O
ATOM 9 C3' G A2560 60.231 -47.019 155.211 1.00136.20 C
ATOM 10 O3' G A2560 59.154 -47.342 154.324 1.00133.40 O
ATOM 11 C2' G A2560 60.369 -48.127 156.256 1.00137.49 C
ATOM 12 O2' G A2560 59.136 -48.649 156.709 1.00138.53 O
ATOM 13 C1' G A2560 61.121 -49.185 155.454 1.00138.68 C
ATOM 14 N9 G A2560 61.871 -50.183 156.209 1.00141.65 N
ATOM 15 C8 G A2560 62.640 -50.008 157.335 1.00138.63 C
ATOM 16 N7 G A2560 63.152 -51.125 157.779 1.00138.06 N
ATOM 17 C5 G A2560 62.696 -52.092 156.888 1.00138.60 C
ATOM 18 C6 G A2560 62.908 -53.498 156.853 1.00137.64 C
ATOM 19 O6 G A2560 63.545 -54.203 157.643 1.00136.13 O
ATOM 20 N1 G A2560 62.274 -54.083 155.760 1.00133.86 N
ATOM 21 C2 G A2560 61.527 -53.411 154.826 1.00131.21 C
ATOM 22 N2 G A2560 61.018 -54.141 153.826 1.00126.96 N
ATOM 23 N3 G A2560 61.302 -52.114 154.862 1.00134.71 N
ATOM 24 C4 G A2560 61.915 -51.520 155.909 1.00139.55 C
ATOM 25 P U A2561 57.640 -46.944 154.698 1.00119.91 P
ATOM 26 OP1 U A2561 57.614 -45.553 155.224 1.00123.89 O
ATOM 27 OP2 U A2561 57.035 -48.037 155.501 1.00128.09 O
ATOM 28 O5' U A2561 56.913 -46.980 153.290 1.00113.37 O
TER
ATOM 1 O3' G B2568 59.623 -59.125 159.693 1.00130.24 O
ATOM 2 P G B2569 60.681 -58.786 158.523 1.00135.65 P
ATOM 3 OP1 G B2569 61.358 -60.050 158.133 1.00134.22 O
ATOM 4 OP2 G B2569 61.499 -57.642 158.998 1.00140.29 O
ATOM 5 O5' G B2569 59.797 -58.265 157.297 1.00129.28 O
ATOM 6 C5' G B2569 58.989 -59.159 156.521 1.00128.46 C
ATOM 7 C4' G B2569 58.259 -58.404 155.427 1.00127.25 C
ATOM 8 O4' G B2569 57.385 -57.407 156.023 1.00128.80 O
ATOM 9 C3' G B2569 59.145 -57.600 154.490 1.00128.23 C
ATOM 10 O3' G B2569 59.702 -58.375 153.442 1.00125.00 O
ATOM 11 C2' G B2569 58.213 -56.506 153.981 1.00129.76 C
ATOM 12 O2' G B2569 57.390 -56.901 152.902 1.00128.97 O
ATOM 13 C1' G B2569 57.367 -56.229 155.220 1.00129.38 C
ATOM 14 N9 G B2569 57.933 -55.129 156.001 1.00134.36 N
ATOM 15 C8 G B2569 58.745 -55.238 157.108 1.00134.77 C
ATOM 16 N7 G B2569 59.109 -54.083 157.595 1.00132.72 N
ATOM 17 C5 G B2569 58.503 -53.151 156.764 1.00134.78 C
ATOM 18 C6 G B2569 58.533 -51.738 156.804 1.00136.06 C
ATOM 19 O6 G B2569 59.112 -51.009 157.613 1.00139.46 O
ATOM 20 N1 G B2569 57.787 -51.175 155.773 1.00129.32 N
ATOM 21 C2 G B2569 57.093 -51.882 154.826 1.00127.31 C
ATOM 22 N2 G B2569 56.427 -51.149 153.924 1.00124.60 N
ATOM 23 N3 G B2569 57.053 -53.208 154.774 1.00131.73 N
ATOM 24 C4 G B2569 57.775 -53.775 155.770 1.00134.68 C
ATOM 25 P A B2570 61.009 -57.835 152.683 1.00121.15 P
ATOM 26 OP1 A B2570 61.637 -58.969 151.963 1.00118.84 O
ATOM 27 OP2 A B2570 61.807 -57.078 153.689 1.00121.99 O
ATOM 28 O5' A B2570 60.409 -56.814 151.610 1.00122.21 O
TER
ATOM 2 P G A2560 64.215 -46.455 152.601 1.00121.00 P
ATOM 3 OP1 G A2560 64.654 -45.044 152.440 1.00120.28 O
ATOM 4 OP2 G A2560 65.104 -47.569 152.143 1.00118.54 O
ATOM 5 O5' G A2560 63.875 -46.689 154.139 1.00125.42 O
ATOM 6 C5' G A2560 62.662 -46.190 154.715 1.00127.11 C
ATOM 7 C4' G A2560 61.531 -47.144 154.414 1.00129.97 C
ATOM 8 O4' G A2560 62.008 -48.498 154.606 1.00133.72 O
ATOM 9 C3' G A2560 60.231 -47.019 155.211 1.00136.20 C
ATOM 10 O3' G A2560 59.154 -47.342 154.324 1.00133.40 O
ATOM 11 C2' G A2560 60.369 -48.127 156.256 1.00137.49 C
ATOM 12 O2' G A2560 59.136 -48.649 156.709 1.00138.53 O
ATOM 13 C1' G A2560 61.121 -49.185 155.454 1.00138.68 C
ATOM 14 N9 G A2560 61.871 -50.183 156.209 1.00141.65 N
ATOM 15 C8 G A2560 62.640 -50.008 157.335 1.00138.63 C
ATOM 16 N7 G A2560 63.152 -51.125 157.779 1.00138.06 N
ATOM 17 C5 G A2560 62.696 -52.092 156.888 1.00138.60 C
ATOM 18 C6 G A2560 62.908 -53.498 156.853 1.00137.64 C
ATOM 19 O6 G A2560 63.545 -54.203 157.643 1.00136.13 O
ATOM 20 N1 G A2560 62.274 -54.083 155.760 1.00133.86 N
ATOM 21 C2 G A2560 61.527 -53.411 154.826 1.00131.21 C
ATOM 22 N2 G A2560 61.018 -54.141 153.826 1.00126.96 N
ATOM 23 N3 G A2560 61.302 -52.114 154.862 1.00134.71 N
ATOM 24 C4 G A2560 61.915 -51.520 155.909 1.00139.55 C
ATOM 25 P U A2561 57.640 -46.944 154.698 1.00119.91 P
ATOM 26 OP1 U A2561 57.614 -45.553 155.224 1.00123.89 O
ATOM 27 OP2 U A2561 57.035 -48.037 155.501 1.00128.09 O
ATOM 28 O5' U A2561 56.913 -46.980 153.290 1.00113.37 O
TER
ATOM 1 O3' G B2568 59.623 -59.125 159.693 1.00130.24 O
ATOM 2 P G B2569 60.681 -58.786 158.523 1.00135.65 P
ATOM 3 OP1 G B2569 61.358 -60.050 158.133 1.00134.22 O
ATOM 4 OP2 G B2569 61.499 -57.642 158.998 1.00140.29 O
ATOM 5 O5' G B2569 59.797 -58.265 157.297 1.00129.28 O
ATOM 6 C5' G B2569 58.989 -59.159 156.521 1.00128.46 C
ATOM 7 C4' G B2569 58.259 -58.404 155.427 1.00127.25 C
ATOM 8 O4' G B2569 57.385 -57.407 156.023 1.00128.80 O
ATOM 9 C3' G B2569 59.145 -57.600 154.490 1.00128.23 C
ATOM 10 O3' G B2569 59.702 -58.375 153.442 1.00125.00 O
ATOM 11 C2' G B2569 58.213 -56.506 153.981 1.00129.76 C
ATOM 12 O2' G B2569 57.390 -56.901 152.902 1.00128.97 O
ATOM 13 C1' G B2569 57.367 -56.229 155.220 1.00129.38 C
ATOM 14 N9 G B2569 57.933 -55.129 156.001 1.00134.36 N
ATOM 15 C8 G B2569 58.745 -55.238 157.108 1.00134.77 C
ATOM 16 N7 G B2569 59.109 -54.083 157.595 1.00132.72 N
ATOM 17 C5 G B2569 58.503 -53.151 156.764 1.00134.78 C
ATOM 18 C6 G B2569 58.533 -51.738 156.804 1.00136.06 C
ATOM 19 O6 G B2569 59.112 -51.009 157.613 1.00139.46 O
ATOM 20 N1 G B2569 57.787 -51.175 155.773 1.00129.32 N
ATOM 21 C2 G B2569 57.093 -51.882 154.826 1.00127.31 C
ATOM 22 N2 G B2569 56.427 -51.149 153.924 1.00124.60 N
ATOM 23 N3 G B2569 57.053 -53.208 154.774 1.00131.73 N
ATOM 24 C4 G B2569 57.775 -53.775 155.770 1.00134.68 C
ATOM 25 P A B2570 61.009 -57.835 152.683 1.00121.15 P
ATOM 26 OP1 A B2570 61.637 -58.969 151.963 1.00118.84 O
ATOM 27 OP2 A B2570 61.807 -57.078 153.689 1.00121.99 O
ATOM 28 O5' A B2570 60.409 -56.814 151.610 1.00122.21 O
TER
Atoms:
OP1: (64.654,-45.044,152.440)
OP2: (65.104,-47.569,152.143)
C3': (60.231,-47.019,155.211)
C1': (61.121,-49.185,155.454)
C5': (62.662,-46.190,154.715)
O6: (63.545,-54.203,157.643)
O4': (62.008,-48.498,154.606)
C8: (62.640,-50.008,157.335)
C2: (61.527,-53.411,154.826)
C6: (62.908,-53.498,156.853)
C5: (62.696,-52.092,156.888)
C4: (61.915,-51.520,155.909)
P: (64.215,-46.455,152.601)
C4': (61.531,-47.144,154.414)
C2': (60.369,-48.127,156.256)
O2': (59.136,-48.649,156.709)
N1: (62.274,-54.083,155.760)
N2: (61.018,-54.141,153.826)
N3: (61.302,-52.114,154.862)
N7: (63.152,-51.125,157.779)
N9: (61.871,-50.183,156.209)
O5': (63.875,-46.689,154.139)
O3': (59.154,-47.342,154.324)
OP2: (65.104,-47.569,152.143)
C3': (60.231,-47.019,155.211)
C1': (61.121,-49.185,155.454)
C5': (62.662,-46.190,154.715)
O6: (63.545,-54.203,157.643)
O4': (62.008,-48.498,154.606)
C8: (62.640,-50.008,157.335)
C2: (61.527,-53.411,154.826)
C6: (62.908,-53.498,156.853)
C5: (62.696,-52.092,156.888)
C4: (61.915,-51.520,155.909)
P: (64.215,-46.455,152.601)
C4': (61.531,-47.144,154.414)
C2': (60.369,-48.127,156.256)
O2': (59.136,-48.649,156.709)
N1: (62.274,-54.083,155.760)
N2: (61.018,-54.141,153.826)
N3: (61.302,-52.114,154.862)
N7: (63.152,-51.125,157.779)
N9: (61.871,-50.183,156.209)
O5': (63.875,-46.689,154.139)
O3': (59.154,-47.342,154.324)
OP1: (61.358,-60.050,158.133)
OP2: (61.499,-57.642,158.998)
C3': (59.145,-57.600,154.490)
C1': (57.367,-56.229,155.220)
C5': (58.989,-59.159,156.521)
O6: (59.112,-51.009,157.613)
O4': (57.385,-57.407,156.023)
C8: (58.745,-55.238,157.108)
C2: (57.093,-51.882,154.826)
C6: (58.533,-51.738,156.804)
C5: (58.503,-53.151,156.764)
C4: (57.775,-53.775,155.770)
P: (60.681,-58.786,158.523)
C4': (58.259,-58.404,155.427)
C2': (58.213,-56.506,153.981)
O2': (57.390,-56.901,152.902)
N1: (57.787,-51.175,155.773)
N2: (56.427,-51.149,153.924)
N3: (57.053,-53.208,154.774)
N7: (59.109,-54.083,157.595)
N9: (57.933,-55.129,156.001)
O5': (59.797,-58.265,157.297)
O3': (59.702,-58.375,153.442)
OP2: (61.499,-57.642,158.998)
C3': (59.145,-57.600,154.490)
C1': (57.367,-56.229,155.220)
C5': (58.989,-59.159,156.521)
O6: (59.112,-51.009,157.613)
O4': (57.385,-57.407,156.023)
C8: (58.745,-55.238,157.108)
C2: (57.093,-51.882,154.826)
C6: (58.533,-51.738,156.804)
C5: (58.503,-53.151,156.764)
C4: (57.775,-53.775,155.770)
P: (60.681,-58.786,158.523)
C4': (58.259,-58.404,155.427)
C2': (58.213,-56.506,153.981)
O2': (57.390,-56.901,152.902)
N1: (57.787,-51.175,155.773)
N2: (56.427,-51.149,153.924)
N3: (57.053,-53.208,154.774)
N7: (59.109,-54.083,157.595)
N9: (57.933,-55.129,156.001)
O5': (59.797,-58.265,157.297)
O3': (59.702,-58.375,153.442)
Image (generated by PyMOL):