ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A130:A132

Extra

PDB:
ATOM 1 O3' C A 129 1.796 -54.710 -57.444 1.00 62.77 O
ATOM 2 P G A 130 0.257 -54.344 -57.522 1.00 87.93 P
ATOM 3 OP1 G A 130 -0.427 -55.548 -57.930 1.00 49.96 O
ATOM 4 OP2 G A 130 0.129 -53.146 -58.349 1.00 43.64 O
ATOM 5 O5' G A 130 -0.099 -53.998 -56.021 1.00 66.38 O
ATOM 6 C5' G A 130 0.333 -54.827 -54.950 1.00 69.75 C
ATOM 7 C4' G A 130 0.361 -54.070 -53.634 1.00 65.17 C
ATOM 8 O4' G A 130 1.513 -53.209 -53.582 1.00 62.77 O
ATOM 9 C3' G A 130 -0.830 -53.153 -53.363 1.00 72.71 C
ATOM 10 O3' G A 130 -1.868 -53.826 -52.666 1.00 85.62 O
ATOM 11 C2' G A 130 -0.244 -51.981 -52.560 1.00 56.62 C
ATOM 12 O2' G A 130 -0.539 -52.117 -51.190 1.00 70.55 O
ATOM 13 C1' G A 130 1.261 -52.126 -52.733 1.00 54.08 C
ATOM 14 N9 G A 130 1.891 -50.913 -53.272 1.00 49.22 N
ATOM 15 C8 G A 130 1.827 -50.363 -54.530 1.00 58.12 C
ATOM 16 N7 G A 130 2.514 -49.252 -54.672 1.00 51.49 N
ATOM 17 C5 G A 130 3.075 -49.069 -53.416 1.00 55.37 C
ATOM 18 C6 G A 130 3.924 -48.039 -52.936 1.00 53.44 C
ATOM 19 O6 G A 130 4.360 -47.066 -53.551 1.00 58.51 O
ATOM 20 N1 G A 130 4.245 -48.219 -51.605 1.00 44.01 N
ATOM 21 C2 G A 130 3.816 -49.271 -50.843 1.00 48.21 C
ATOM 22 N2 G A 130 4.243 -49.284 -49.578 1.00 49.35 N
ATOM 23 N3 G A 130 3.027 -50.244 -51.268 1.00 48.95 N
ATOM 24 C4 G A 130 2.692 -50.079 -52.554 1.00 50.70 C
ATOM 25 P G A 131 -3.229 -54.243 -53.395 1.00 54.99 P
ATOM 26 OP1 G A 131 -3.758 -55.422 -52.678 1.00127.80 O
ATOM 27 OP2 G A 131 -2.941 -54.354 -54.842 1.00111.78 O
ATOM 28 O5' G A 131 -4.143 -53.004 -53.128 1.00 38.10 O
TER

ATOM 1 O3' G B 131 -3.839 -48.858 -54.779 1.00 44.45 O
ATOM 2 P G B 132 -2.512 -48.717 -55.637 1.00 60.10 P
ATOM 3 OP1 G B 132 -2.905 -48.325 -57.014 1.00 82.61 O
ATOM 4 OP2 G B 132 -1.731 -49.966 -55.446 1.00 62.57 O
ATOM 5 O5' G B 132 -1.807 -47.508 -54.920 1.00 51.25 O
ATOM 6 C5' G B 132 -2.558 -46.380 -54.528 1.00 50.60 C
ATOM 7 C4' G B 132 -1.672 -45.350 -53.935 1.00 53.73 C
ATOM 8 O4' G B 132 -1.369 -45.747 -52.578 1.00 60.36 O
ATOM 9 C3' G B 132 -0.343 -45.213 -54.647 1.00 64.96 C
ATOM 10 O3' G B 132 0.115 -43.872 -54.563 1.00 63.71 O
ATOM 11 C2' G B 132 0.571 -46.132 -53.851 1.00 66.17 C
ATOM 12 O2' G B 132 1.941 -45.791 -53.917 1.00 73.04 O
ATOM 13 C1' G B 132 0.012 -45.990 -52.433 1.00 65.31 C
ATOM 14 N9 G B 132 0.162 -47.193 -51.609 1.00 53.83 N
ATOM 15 C8 G B 132 -0.241 -48.446 -51.972 1.00 54.85 C
ATOM 16 N7 G B 132 0.019 -49.353 -51.070 1.00 58.18 N
ATOM 17 C5 G B 132 0.622 -48.662 -50.035 1.00 47.92 C
ATOM 18 C6 G B 132 1.112 -49.123 -48.785 1.00 52.08 C
ATOM 19 O6 G B 132 1.125 -50.263 -48.294 1.00 65.31 O
ATOM 20 N1 G B 132 1.651 -48.098 -48.044 1.00 48.86 N
ATOM 21 C2 G B 132 1.706 -46.805 -48.452 1.00 49.93 C
ATOM 22 N2 G B 132 2.273 -45.988 -47.563 1.00 54.36 N
ATOM 23 N3 G B 132 1.253 -46.351 -49.606 1.00 43.86 N
ATOM 24 C4 G B 132 0.719 -47.328 -50.352 1.00 47.54 C
ATOM 25 P A B 133 0.834 -43.209 -55.826 1.00 52.29 P
ATOM 26 OP1 A B 133 -0.121 -43.254 -56.955 1.00129.17 O
ATOM 27 OP2 A B 133 2.147 -43.880 -55.978 1.00120.96 O
ATOM 28 O5' A B 133 1.048 -41.714 -55.361 1.00 63.44 O
TER

Atoms:
OP1: (-0.427,-55.548,-57.930)
OP2: (0.129,-53.146,-58.349)
C3': (-0.830,-53.153,-53.363)
C1': (1.261,-52.126,-52.733)
C5': (0.333,-54.827,-54.950)
O6: (4.360,-47.066,-53.551)
O4': (1.513,-53.209,-53.582)
C8: (1.827,-50.363,-54.530)
C2: (3.816,-49.271,-50.843)
C6: (3.924,-48.039,-52.936)
C5: (3.075,-49.069,-53.416)
C4: (2.692,-50.079,-52.554)
P: (0.257,-54.344,-57.522)
C4': (0.361,-54.070,-53.634)
C2': (-0.244,-51.981,-52.560)
O2': (-0.539,-52.117,-51.190)
N1: (4.245,-48.219,-51.605)
N2: (4.243,-49.284,-49.578)
N3: (3.027,-50.244,-51.268)
N7: (2.514,-49.252,-54.672)
N9: (1.891,-50.913,-53.272)
O5': (-0.099,-53.998,-56.021)
O3': (-1.868,-53.826,-52.666)
OP1: (-2.905,-48.325,-57.014)
OP2: (-1.731,-49.966,-55.446)
C3': (-0.343,-45.213,-54.647)
C1': (0.012,-45.990,-52.433)
C5': (-2.558,-46.380,-54.528)
O6: (1.125,-50.263,-48.294)
O4': (-1.369,-45.747,-52.578)
C8: (-0.241,-48.446,-51.972)
C2: (1.706,-46.805,-48.452)
C6: (1.112,-49.123,-48.785)
C5: (0.622,-48.662,-50.035)
C4: (0.719,-47.328,-50.352)
P: (-2.512,-48.717,-55.637)
C4': (-1.672,-45.350,-53.935)
C2': (0.571,-46.132,-53.851)
O2': (1.941,-45.791,-53.917)
N1: (1.651,-48.098,-48.044)
N2: (2.273,-45.988,-47.563)
N3: (1.253,-46.351,-49.606)
N7: (0.019,-49.353,-51.070)
N9: (0.162,-47.193,-51.609)
O5': (-1.807,-47.508,-54.920)
O3': (0.115,-43.872,-54.563)
Image (generated by PyMOL):
PyMOL image
show in jmol