ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1025:A1026

Extra

PDB:
ATOM 1 O3' U A1024 117.255 -80.693 17.661 1.00 78.77 O
ATOM 2 P G A1025 116.357 -80.821 16.331 1.00 56.07 P
ATOM 3 OP1 G A1025 116.827 -79.766 15.398 1.00 46.63 O
ATOM 4 OP2 G A1025 114.920 -80.822 16.762 1.00 63.42 O
ATOM 5 O5' G A1025 116.764 -82.247 15.772 1.00 42.89 O
ATOM 6 C5' G A1025 118.015 -82.430 15.147 1.00 57.71 C
ATOM 7 C4' G A1025 118.230 -83.861 14.786 1.00 58.17 C
ATOM 8 O4' G A1025 118.167 -84.670 15.975 1.00 61.61 O
ATOM 9 C3' G A1025 117.190 -84.461 13.879 1.00 58.06 C
ATOM 10 O3' G A1025 117.406 -84.126 12.517 1.00 72.56 O
ATOM 11 C2' G A1025 117.310 -85.943 14.183 1.00 54.02 C
ATOM 12 O2' G A1025 118.422 -86.498 13.508 1.00 68.73 O
ATOM 13 C1' G A1025 117.614 -85.922 15.681 1.00 49.35 C
ATOM 14 N9 G A1025 116.405 -86.079 16.500 1.00 49.35 N
ATOM 15 C8 G A1025 115.647 -85.028 16.940 1.00 54.62 C
ATOM 16 N7 G A1025 114.617 -85.406 17.647 1.00 53.76 N
ATOM 17 C5 G A1025 114.708 -86.784 17.688 1.00 50.12 C
ATOM 18 C6 G A1025 113.862 -87.716 18.321 1.00 45.18 C
ATOM 19 O6 G A1025 112.856 -87.495 18.977 1.00 51.23 O
ATOM 20 N1 G A1025 114.280 -89.018 18.143 1.00 48.97 N
ATOM 21 C2 G A1025 115.397 -89.375 17.421 1.00 63.81 C
ATOM 22 N2 G A1025 115.620 -90.701 17.356 1.00 55.81 N
ATOM 23 N3 G A1025 116.221 -88.506 16.814 1.00 62.04 N
ATOM 24 C4 G A1025 115.816 -87.227 16.994 1.00 57.51 C
ATOM 25 P G A1026 116.265 -84.368 11.411 1.00 57.41 P
ATOM 26 OP1 G A1026 115.488 -85.541 11.838 1.00 85.02 O
ATOM 27 OP2 G A1026 116.945 -84.403 10.107 1.00 80.67 O
ATOM 28 O5' G A1026 115.357 -83.073 11.502 1.00 45.29 O
TER

ATOM 1 O3' G B1025 117.406 -84.126 12.517 1.00 72.56 O
ATOM 2 P G B1026 116.265 -84.368 11.411 1.00 57.41 P
ATOM 3 OP1 G B1026 115.488 -85.541 11.838 1.00 85.02 O
ATOM 4 OP2 G B1026 116.945 -84.403 10.107 1.00 80.67 O
ATOM 5 O5' G B1026 115.357 -83.073 11.502 1.00 45.29 O
ATOM 6 C5' G B1026 115.098 -82.450 12.737 1.00 64.98 C
ATOM 7 C4' G B1026 113.631 -82.272 12.977 1.00 58.19 C
ATOM 8 O4' G B1026 113.014 -83.573 12.971 1.00 46.24 O
ATOM 9 C3' G B1026 113.282 -81.635 14.321 1.00 63.36 C
ATOM 10 O3' G B1026 112.125 -80.816 14.188 1.00 53.41 O
ATOM 11 C2' G B1026 112.979 -82.837 15.201 1.00 59.58 C
ATOM 12 O2' G B1026 112.108 -82.566 16.267 1.00 71.46 O
ATOM 13 C1' G B1026 112.359 -83.800 14.205 1.00 53.83 C
ATOM 14 N9 G B1026 112.518 -85.218 14.542 1.00 50.96 N
ATOM 15 C8 G B1026 113.471 -86.037 14.001 1.00 56.39 C
ATOM 16 N7 G B1026 113.390 -87.276 14.405 1.00 54.04 N
ATOM 17 C5 G B1026 112.291 -87.296 15.246 1.00 53.21 C
ATOM 18 C6 G B1026 111.702 -88.371 15.966 1.00 50.31 C
ATOM 19 O6 G B1026 112.016 -89.557 16.037 1.00 53.55 O
ATOM 20 N1 G B1026 110.616 -87.973 16.692 1.00 51.65 N
ATOM 21 C2 G B1026 110.138 -86.701 16.713 1.00 60.68 C
ATOM 22 N2 G B1026 109.053 -86.533 17.485 1.00 68.37 N
ATOM 23 N3 G B1026 110.665 -85.684 16.045 1.00 59.65 N
ATOM 24 C4 G B1026 111.740 -86.040 15.333 1.00 51.87 C
ATOM 25 P U B1027 112.198 -79.253 14.550 1.00 56.21 P
ATOM 26 OP1 U B1027 112.247 -79.150 16.024 1.00104.14 O
ATOM 27 OP2 U B1027 111.097 -78.587 13.835 1.00113.43 O
ATOM 28 O5' U B1027 113.594 -78.802 13.939 1.00123.28 O
TER

Atoms:
OP1: (116.827,-79.766,15.398)
OP2: (114.920,-80.822,16.762)
C3': (117.190,-84.461,13.879)
C1': (117.614,-85.922,15.681)
C5': (118.015,-82.430,15.147)
O6: (112.856,-87.495,18.977)
O4': (118.167,-84.670,15.975)
C8: (115.647,-85.028,16.940)
C2: (115.397,-89.375,17.421)
C6: (113.862,-87.716,18.321)
C5: (114.708,-86.784,17.688)
C4: (115.816,-87.227,16.994)
P: (116.357,-80.821,16.331)
C4': (118.230,-83.861,14.786)
C2': (117.310,-85.943,14.183)
O2': (118.422,-86.498,13.508)
N1: (114.280,-89.018,18.143)
N2: (115.620,-90.701,17.356)
N3: (116.221,-88.506,16.814)
N7: (114.617,-85.406,17.647)
N9: (116.405,-86.079,16.500)
O5': (116.764,-82.247,15.772)
O3': (117.406,-84.126,12.517)
OP1: (115.488,-85.541,11.838)
OP2: (116.945,-84.403,10.107)
C3': (113.282,-81.635,14.321)
C1': (112.359,-83.800,14.205)
C5': (115.098,-82.450,12.737)
O6: (112.016,-89.557,16.037)
O4': (113.014,-83.573,12.971)
C8: (113.471,-86.037,14.001)
C2: (110.138,-86.701,16.713)
C6: (111.702,-88.371,15.966)
C5: (112.291,-87.296,15.246)
C4: (111.740,-86.040,15.333)
P: (116.265,-84.368,11.411)
C4': (113.631,-82.272,12.977)
C2': (112.979,-82.837,15.201)
O2': (112.108,-82.566,16.267)
N1: (110.616,-87.973,16.692)
N2: (109.053,-86.533,17.485)
N3: (110.665,-85.684,16.045)
N7: (113.390,-87.276,14.405)
N9: (112.518,-85.218,14.542)
O5': (115.357,-83.073,11.502)
O3': (112.125,-80.816,14.188)
Image (generated by PyMOL):
PyMOL image
show in jmol