Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2648:A2657
Extra
PDB:
ATOM 1 O3' A A2647 -80.800 -50.295 -70.545 1.00 15.79 O
ATOM 2 P G A2648 -80.200 -49.433 -71.756 1.00 23.68 P
ATOM 3 OP1 G A2648 -81.162 -49.543 -72.889 1.00 23.68 O
ATOM 4 OP2 G A2648 -78.782 -49.876 -71.951 1.00 23.68 O
ATOM 5 O5' G A2648 -80.231 -47.967 -71.176 1.00 23.68 O
ATOM 6 C5' G A2648 -81.382 -47.165 -71.347 1.00 23.68 C
ATOM 7 C4' G A2648 -82.541 -47.682 -70.543 1.00 23.68 C
ATOM 8 O4' G A2648 -82.232 -47.515 -69.129 1.00 23.68 O
ATOM 9 C3' G A2648 -83.851 -46.928 -70.762 1.00 23.68 C
ATOM 10 O3' G A2648 -84.960 -47.804 -70.506 1.00 23.68 O
ATOM 11 C2' G A2648 -83.760 -45.859 -69.681 1.00 23.68 C
ATOM 12 O2' G A2648 -84.970 -45.217 -69.362 1.00 23.68 O
ATOM 13 C1' G A2648 -83.226 -46.703 -68.541 1.00 23.68 C
ATOM 14 N9 G A2648 -82.646 -45.950 -67.434 1.00 24.29 N
ATOM 15 C8 G A2648 -82.000 -44.751 -67.456 1.00 24.29 C
ATOM 16 N7 G A2648 -81.661 -44.355 -66.250 1.00 24.29 N
ATOM 17 C5 G A2648 -82.122 -45.345 -65.380 1.00 24.29 C
ATOM 18 C6 G A2648 -82.049 -45.478 -63.954 1.00 24.29 C
ATOM 19 O6 G A2648 -81.540 -44.724 -63.110 1.00 24.29 O
ATOM 20 N1 G A2648 -82.649 -46.649 -63.506 1.00 24.29 N
ATOM 21 C2 G A2648 -83.249 -47.576 -64.323 1.00 24.29 C
ATOM 22 N2 G A2648 -83.775 -48.639 -63.695 1.00 24.29 N
ATOM 23 N3 G A2648 -83.324 -47.471 -65.648 1.00 24.29 N
ATOM 24 C4 G A2648 -82.740 -46.339 -66.109 1.00 24.29 C
ATOM 25 P U A2649 -86.473 -47.241 -70.579 1.00 16.42 P
ATOM 26 OP1 U A2649 -86.567 -46.369 -71.786 1.00 16.42 O
ATOM 27 OP2 U A2649 -86.792 -46.646 -69.261 1.00 16.42 O
ATOM 28 O5' U A2649 -87.339 -48.560 -70.793 1.00 16.42 O
TER
ATOM 1 O3' G B2656 -85.675 -42.238 -59.056 1.00 26.29 O
ATOM 2 P G B2657 -84.844 -43.594 -58.964 1.00 9.28 P
ATOM 3 OP1 G B2657 -84.540 -43.813 -57.520 1.00 9.28 O
ATOM 4 OP2 G B2657 -83.714 -43.482 -59.934 1.00 9.28 O
ATOM 5 O5' G B2657 -85.889 -44.680 -59.484 1.00 9.28 O
ATOM 6 C5' G B2657 -86.418 -45.678 -58.620 1.00 9.28 C
ATOM 7 C4' G B2657 -86.876 -46.899 -59.394 1.00 9.28 C
ATOM 8 O4' G B2657 -87.778 -46.515 -60.474 1.00 9.28 O
ATOM 9 C3' G B2657 -85.799 -47.683 -60.106 1.00 9.28 C
ATOM 10 O3' G B2657 -85.078 -48.513 -59.252 1.00 9.28 O
ATOM 11 C2' G B2657 -86.598 -48.443 -61.139 1.00 9.28 C
ATOM 12 O2' G B2657 -87.331 -49.489 -60.522 1.00 9.28 O
ATOM 13 C1' G B2657 -87.570 -47.361 -61.584 1.00 9.28 C
ATOM 14 N9 G B2657 -87.006 -46.543 -62.661 1.00 9.31 N
ATOM 15 C8 G B2657 -86.343 -45.373 -62.429 1.00 9.31 C
ATOM 16 N7 G B2657 -85.911 -44.801 -63.510 1.00 9.31 N
ATOM 17 C5 G B2657 -86.328 -45.645 -64.507 1.00 9.31 C
ATOM 18 C6 G B2657 -86.137 -45.507 -65.875 1.00 9.31 C
ATOM 19 O6 G B2657 -85.548 -44.574 -66.431 1.00 9.31 O
ATOM 20 N1 G B2657 -86.700 -46.560 -66.580 1.00 9.31 N
ATOM 21 C2 G B2657 -87.369 -47.617 -66.030 1.00 9.31 C
ATOM 22 N2 G B2657 -87.843 -48.547 -66.875 1.00 9.31 N
ATOM 23 N3 G B2657 -87.552 -47.744 -64.727 1.00 9.31 N
ATOM 24 C4 G B2657 -87.009 -46.725 -64.023 1.00 9.31 C
ATOM 25 P A B2658 -83.906 -49.398 -59.849 1.00 7.82 P
ATOM 26 OP1 A B2658 -83.353 -50.210 -58.737 1.00 7.82 O
ATOM 27 OP2 A B2658 -83.010 -48.485 -60.586 1.00 7.82 O
ATOM 28 O5' A B2658 -84.663 -50.332 -60.869 1.00 7.82 O
TER
ATOM 2 P G A2648 -80.200 -49.433 -71.756 1.00 23.68 P
ATOM 3 OP1 G A2648 -81.162 -49.543 -72.889 1.00 23.68 O
ATOM 4 OP2 G A2648 -78.782 -49.876 -71.951 1.00 23.68 O
ATOM 5 O5' G A2648 -80.231 -47.967 -71.176 1.00 23.68 O
ATOM 6 C5' G A2648 -81.382 -47.165 -71.347 1.00 23.68 C
ATOM 7 C4' G A2648 -82.541 -47.682 -70.543 1.00 23.68 C
ATOM 8 O4' G A2648 -82.232 -47.515 -69.129 1.00 23.68 O
ATOM 9 C3' G A2648 -83.851 -46.928 -70.762 1.00 23.68 C
ATOM 10 O3' G A2648 -84.960 -47.804 -70.506 1.00 23.68 O
ATOM 11 C2' G A2648 -83.760 -45.859 -69.681 1.00 23.68 C
ATOM 12 O2' G A2648 -84.970 -45.217 -69.362 1.00 23.68 O
ATOM 13 C1' G A2648 -83.226 -46.703 -68.541 1.00 23.68 C
ATOM 14 N9 G A2648 -82.646 -45.950 -67.434 1.00 24.29 N
ATOM 15 C8 G A2648 -82.000 -44.751 -67.456 1.00 24.29 C
ATOM 16 N7 G A2648 -81.661 -44.355 -66.250 1.00 24.29 N
ATOM 17 C5 G A2648 -82.122 -45.345 -65.380 1.00 24.29 C
ATOM 18 C6 G A2648 -82.049 -45.478 -63.954 1.00 24.29 C
ATOM 19 O6 G A2648 -81.540 -44.724 -63.110 1.00 24.29 O
ATOM 20 N1 G A2648 -82.649 -46.649 -63.506 1.00 24.29 N
ATOM 21 C2 G A2648 -83.249 -47.576 -64.323 1.00 24.29 C
ATOM 22 N2 G A2648 -83.775 -48.639 -63.695 1.00 24.29 N
ATOM 23 N3 G A2648 -83.324 -47.471 -65.648 1.00 24.29 N
ATOM 24 C4 G A2648 -82.740 -46.339 -66.109 1.00 24.29 C
ATOM 25 P U A2649 -86.473 -47.241 -70.579 1.00 16.42 P
ATOM 26 OP1 U A2649 -86.567 -46.369 -71.786 1.00 16.42 O
ATOM 27 OP2 U A2649 -86.792 -46.646 -69.261 1.00 16.42 O
ATOM 28 O5' U A2649 -87.339 -48.560 -70.793 1.00 16.42 O
TER
ATOM 1 O3' G B2656 -85.675 -42.238 -59.056 1.00 26.29 O
ATOM 2 P G B2657 -84.844 -43.594 -58.964 1.00 9.28 P
ATOM 3 OP1 G B2657 -84.540 -43.813 -57.520 1.00 9.28 O
ATOM 4 OP2 G B2657 -83.714 -43.482 -59.934 1.00 9.28 O
ATOM 5 O5' G B2657 -85.889 -44.680 -59.484 1.00 9.28 O
ATOM 6 C5' G B2657 -86.418 -45.678 -58.620 1.00 9.28 C
ATOM 7 C4' G B2657 -86.876 -46.899 -59.394 1.00 9.28 C
ATOM 8 O4' G B2657 -87.778 -46.515 -60.474 1.00 9.28 O
ATOM 9 C3' G B2657 -85.799 -47.683 -60.106 1.00 9.28 C
ATOM 10 O3' G B2657 -85.078 -48.513 -59.252 1.00 9.28 O
ATOM 11 C2' G B2657 -86.598 -48.443 -61.139 1.00 9.28 C
ATOM 12 O2' G B2657 -87.331 -49.489 -60.522 1.00 9.28 O
ATOM 13 C1' G B2657 -87.570 -47.361 -61.584 1.00 9.28 C
ATOM 14 N9 G B2657 -87.006 -46.543 -62.661 1.00 9.31 N
ATOM 15 C8 G B2657 -86.343 -45.373 -62.429 1.00 9.31 C
ATOM 16 N7 G B2657 -85.911 -44.801 -63.510 1.00 9.31 N
ATOM 17 C5 G B2657 -86.328 -45.645 -64.507 1.00 9.31 C
ATOM 18 C6 G B2657 -86.137 -45.507 -65.875 1.00 9.31 C
ATOM 19 O6 G B2657 -85.548 -44.574 -66.431 1.00 9.31 O
ATOM 20 N1 G B2657 -86.700 -46.560 -66.580 1.00 9.31 N
ATOM 21 C2 G B2657 -87.369 -47.617 -66.030 1.00 9.31 C
ATOM 22 N2 G B2657 -87.843 -48.547 -66.875 1.00 9.31 N
ATOM 23 N3 G B2657 -87.552 -47.744 -64.727 1.00 9.31 N
ATOM 24 C4 G B2657 -87.009 -46.725 -64.023 1.00 9.31 C
ATOM 25 P A B2658 -83.906 -49.398 -59.849 1.00 7.82 P
ATOM 26 OP1 A B2658 -83.353 -50.210 -58.737 1.00 7.82 O
ATOM 27 OP2 A B2658 -83.010 -48.485 -60.586 1.00 7.82 O
ATOM 28 O5' A B2658 -84.663 -50.332 -60.869 1.00 7.82 O
TER
Atoms:
OP1: (-81.162,-49.543,-72.889)
OP2: (-78.782,-49.876,-71.951)
C3': (-83.851,-46.928,-70.762)
C1': (-83.226,-46.703,-68.541)
C5': (-81.382,-47.165,-71.347)
O6: (-81.540,-44.724,-63.110)
O4': (-82.232,-47.515,-69.129)
C8: (-82.000,-44.751,-67.456)
C2: (-83.249,-47.576,-64.323)
C6: (-82.049,-45.478,-63.954)
C5: (-82.122,-45.345,-65.380)
C4: (-82.740,-46.339,-66.109)
P: (-80.200,-49.433,-71.756)
C4': (-82.541,-47.682,-70.543)
C2': (-83.760,-45.859,-69.681)
O2': (-84.970,-45.217,-69.362)
N1: (-82.649,-46.649,-63.506)
N2: (-83.775,-48.639,-63.695)
N3: (-83.324,-47.471,-65.648)
N7: (-81.661,-44.355,-66.250)
N9: (-82.646,-45.950,-67.434)
O5': (-80.231,-47.967,-71.176)
O3': (-84.960,-47.804,-70.506)
OP2: (-78.782,-49.876,-71.951)
C3': (-83.851,-46.928,-70.762)
C1': (-83.226,-46.703,-68.541)
C5': (-81.382,-47.165,-71.347)
O6: (-81.540,-44.724,-63.110)
O4': (-82.232,-47.515,-69.129)
C8: (-82.000,-44.751,-67.456)
C2: (-83.249,-47.576,-64.323)
C6: (-82.049,-45.478,-63.954)
C5: (-82.122,-45.345,-65.380)
C4: (-82.740,-46.339,-66.109)
P: (-80.200,-49.433,-71.756)
C4': (-82.541,-47.682,-70.543)
C2': (-83.760,-45.859,-69.681)
O2': (-84.970,-45.217,-69.362)
N1: (-82.649,-46.649,-63.506)
N2: (-83.775,-48.639,-63.695)
N3: (-83.324,-47.471,-65.648)
N7: (-81.661,-44.355,-66.250)
N9: (-82.646,-45.950,-67.434)
O5': (-80.231,-47.967,-71.176)
O3': (-84.960,-47.804,-70.506)
OP1: (-84.540,-43.813,-57.520)
OP2: (-83.714,-43.482,-59.934)
C3': (-85.799,-47.683,-60.106)
C1': (-87.570,-47.361,-61.584)
C5': (-86.418,-45.678,-58.620)
O6: (-85.548,-44.574,-66.431)
O4': (-87.778,-46.515,-60.474)
C8: (-86.343,-45.373,-62.429)
C2: (-87.369,-47.617,-66.030)
C6: (-86.137,-45.507,-65.875)
C5: (-86.328,-45.645,-64.507)
C4: (-87.009,-46.725,-64.023)
P: (-84.844,-43.594,-58.964)
C4': (-86.876,-46.899,-59.394)
C2': (-86.598,-48.443,-61.139)
O2': (-87.331,-49.489,-60.522)
N1: (-86.700,-46.560,-66.580)
N2: (-87.843,-48.547,-66.875)
N3: (-87.552,-47.744,-64.727)
N7: (-85.911,-44.801,-63.510)
N9: (-87.006,-46.543,-62.661)
O5': (-85.889,-44.680,-59.484)
O3': (-85.078,-48.513,-59.252)
OP2: (-83.714,-43.482,-59.934)
C3': (-85.799,-47.683,-60.106)
C1': (-87.570,-47.361,-61.584)
C5': (-86.418,-45.678,-58.620)
O6: (-85.548,-44.574,-66.431)
O4': (-87.778,-46.515,-60.474)
C8: (-86.343,-45.373,-62.429)
C2: (-87.369,-47.617,-66.030)
C6: (-86.137,-45.507,-65.875)
C5: (-86.328,-45.645,-64.507)
C4: (-87.009,-46.725,-64.023)
P: (-84.844,-43.594,-58.964)
C4': (-86.876,-46.899,-59.394)
C2': (-86.598,-48.443,-61.139)
O2': (-87.331,-49.489,-60.522)
N1: (-86.700,-46.560,-66.580)
N2: (-87.843,-48.547,-66.875)
N3: (-87.552,-47.744,-64.727)
N7: (-85.911,-44.801,-63.510)
N9: (-87.006,-46.543,-62.661)
O5': (-85.889,-44.680,-59.484)
O3': (-85.078,-48.513,-59.252)
Image (generated by PyMOL):