Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B23:B55
Extra
PDB:
ATOM 1 O3' G A 22 -185.860 -57.341 18.927 1.00 15.02 O
ATOM 2 P G A 23 -186.692 -56.004 19.219 1.00 11.04 P
ATOM 3 OP1 G A 23 -188.135 -56.368 19.159 1.00 11.04 O
ATOM 4 OP2 G A 23 -186.172 -54.937 18.302 1.00 11.04 O
ATOM 5 O5' G A 23 -186.292 -55.682 20.712 1.00 11.04 O
ATOM 6 C5' G A 23 -186.593 -56.611 21.738 1.00 11.04 C
ATOM 7 C4' G A 23 -186.304 -56.035 23.085 1.00 11.04 C
ATOM 8 O4' G A 23 -184.870 -55.907 23.230 1.00 11.04 O
ATOM 9 C3' G A 23 -186.888 -54.651 23.299 1.00 11.04 C
ATOM 10 O3' G A 23 -187.223 -54.466 24.670 1.00 11.04 O
ATOM 11 C2' G A 23 -185.757 -53.719 22.903 1.00 11.04 C
ATOM 12 O2' G A 23 -185.786 -52.468 23.574 1.00 11.04 O
ATOM 13 C1' G A 23 -184.495 -54.543 23.256 1.00 11.04 C
ATOM 14 N9 G A 23 -183.386 -54.365 22.306 1.00 10.89 N
ATOM 15 C8 G A 23 -183.536 -53.976 21.009 1.00 10.89 C
ATOM 16 N7 G A 23 -182.408 -53.866 20.389 1.00 10.89 N
ATOM 17 C5 G A 23 -181.439 -54.202 21.325 1.00 10.89 C
ATOM 18 C6 G A 23 -180.010 -54.271 21.222 1.00 10.89 C
ATOM 19 O6 G A 23 -179.283 -54.039 20.250 1.00 10.89 O
ATOM 20 N1 G A 23 -179.381 -54.674 22.379 1.00 10.89 N
ATOM 21 C2 G A 23 -180.064 -54.949 23.514 1.00 10.89 C
ATOM 22 N2 G A 23 -179.287 -55.315 24.545 1.00 10.89 N
ATOM 23 N3 G A 23 -181.393 -54.878 23.633 1.00 10.89 N
ATOM 24 C4 G A 23 -182.031 -54.513 22.510 1.00 10.89 C
ATOM 25 P U A 24 -188.751 -54.228 25.059 1.00 22.77 P
ATOM 26 OP1 U A 24 -189.563 -55.165 24.228 1.00 22.77 O
ATOM 27 OP2 U A 24 -188.993 -52.770 24.938 1.00 22.77 O
ATOM 28 O5' U A 24 -188.828 -54.668 26.580 1.00 22.77 O
TER
ATOM 1 O3' U B 54 -185.405 -46.494 18.495 1.00 6.42 O
ATOM 2 P G B 55 -186.345 -47.676 17.948 1.00 0.18 P
ATOM 3 OP1 G B 55 -186.422 -47.502 16.458 1.00 0.18 O
ATOM 4 OP2 G B 55 -187.606 -47.639 18.764 1.00 0.18 O
ATOM 5 O5' G B 55 -185.529 -49.010 18.309 1.00 0.18 O
ATOM 6 C5' G B 55 -184.687 -49.659 17.350 1.00 0.18 C
ATOM 7 C4' G B 55 -183.228 -49.260 17.515 1.00 0.18 C
ATOM 8 O4' G B 55 -182.945 -49.019 18.927 1.00 0.18 O
ATOM 9 C3' G B 55 -182.222 -50.298 17.052 1.00 0.18 C
ATOM 10 O3' G B 55 -181.086 -49.642 16.522 1.00 0.18 O
ATOM 11 C2' G B 55 -181.865 -51.025 18.347 1.00 0.18 C
ATOM 12 O2' G B 55 -180.603 -51.663 18.348 1.00 0.18 O
ATOM 13 C1' G B 55 -181.943 -49.903 19.382 1.00 0.18 C
ATOM 14 N9 G B 55 -182.324 -50.357 20.718 1.00 0.01 N
ATOM 15 C8 G B 55 -183.595 -50.357 21.214 1.00 0.01 C
ATOM 16 N7 G B 55 -183.673 -50.799 22.432 1.00 0.01 N
ATOM 17 C5 G B 55 -182.370 -51.111 22.774 1.00 0.01 C
ATOM 18 C6 G B 55 -181.837 -51.653 23.978 1.00 0.01 C
ATOM 19 O6 G B 55 -182.414 -51.969 25.016 1.00 0.01 O
ATOM 20 N1 G B 55 -180.473 -51.835 23.912 1.00 0.01 N
ATOM 21 C2 G B 55 -179.724 -51.528 22.814 1.00 0.01 C
ATOM 22 N2 G B 55 -178.422 -51.770 22.952 1.00 0.01 N
ATOM 23 N3 G B 55 -180.195 -51.039 21.675 1.00 0.01 N
ATOM 24 C4 G B 55 -181.525 -50.847 21.721 1.00 0.01 C
ATOM 25 P A B 56 -181.016 -49.344 14.950 1.00 7.27 P
ATOM 26 OP1 A B 56 -182.146 -50.063 14.318 1.00 7.27 O
ATOM 27 OP2 A B 56 -179.654 -49.646 14.487 1.00 7.27 O
ATOM 28 O5' A B 56 -181.248 -47.790 14.867 1.00 7.27 O
TER
ATOM 2 P G A 23 -186.692 -56.004 19.219 1.00 11.04 P
ATOM 3 OP1 G A 23 -188.135 -56.368 19.159 1.00 11.04 O
ATOM 4 OP2 G A 23 -186.172 -54.937 18.302 1.00 11.04 O
ATOM 5 O5' G A 23 -186.292 -55.682 20.712 1.00 11.04 O
ATOM 6 C5' G A 23 -186.593 -56.611 21.738 1.00 11.04 C
ATOM 7 C4' G A 23 -186.304 -56.035 23.085 1.00 11.04 C
ATOM 8 O4' G A 23 -184.870 -55.907 23.230 1.00 11.04 O
ATOM 9 C3' G A 23 -186.888 -54.651 23.299 1.00 11.04 C
ATOM 10 O3' G A 23 -187.223 -54.466 24.670 1.00 11.04 O
ATOM 11 C2' G A 23 -185.757 -53.719 22.903 1.00 11.04 C
ATOM 12 O2' G A 23 -185.786 -52.468 23.574 1.00 11.04 O
ATOM 13 C1' G A 23 -184.495 -54.543 23.256 1.00 11.04 C
ATOM 14 N9 G A 23 -183.386 -54.365 22.306 1.00 10.89 N
ATOM 15 C8 G A 23 -183.536 -53.976 21.009 1.00 10.89 C
ATOM 16 N7 G A 23 -182.408 -53.866 20.389 1.00 10.89 N
ATOM 17 C5 G A 23 -181.439 -54.202 21.325 1.00 10.89 C
ATOM 18 C6 G A 23 -180.010 -54.271 21.222 1.00 10.89 C
ATOM 19 O6 G A 23 -179.283 -54.039 20.250 1.00 10.89 O
ATOM 20 N1 G A 23 -179.381 -54.674 22.379 1.00 10.89 N
ATOM 21 C2 G A 23 -180.064 -54.949 23.514 1.00 10.89 C
ATOM 22 N2 G A 23 -179.287 -55.315 24.545 1.00 10.89 N
ATOM 23 N3 G A 23 -181.393 -54.878 23.633 1.00 10.89 N
ATOM 24 C4 G A 23 -182.031 -54.513 22.510 1.00 10.89 C
ATOM 25 P U A 24 -188.751 -54.228 25.059 1.00 22.77 P
ATOM 26 OP1 U A 24 -189.563 -55.165 24.228 1.00 22.77 O
ATOM 27 OP2 U A 24 -188.993 -52.770 24.938 1.00 22.77 O
ATOM 28 O5' U A 24 -188.828 -54.668 26.580 1.00 22.77 O
TER
ATOM 1 O3' U B 54 -185.405 -46.494 18.495 1.00 6.42 O
ATOM 2 P G B 55 -186.345 -47.676 17.948 1.00 0.18 P
ATOM 3 OP1 G B 55 -186.422 -47.502 16.458 1.00 0.18 O
ATOM 4 OP2 G B 55 -187.606 -47.639 18.764 1.00 0.18 O
ATOM 5 O5' G B 55 -185.529 -49.010 18.309 1.00 0.18 O
ATOM 6 C5' G B 55 -184.687 -49.659 17.350 1.00 0.18 C
ATOM 7 C4' G B 55 -183.228 -49.260 17.515 1.00 0.18 C
ATOM 8 O4' G B 55 -182.945 -49.019 18.927 1.00 0.18 O
ATOM 9 C3' G B 55 -182.222 -50.298 17.052 1.00 0.18 C
ATOM 10 O3' G B 55 -181.086 -49.642 16.522 1.00 0.18 O
ATOM 11 C2' G B 55 -181.865 -51.025 18.347 1.00 0.18 C
ATOM 12 O2' G B 55 -180.603 -51.663 18.348 1.00 0.18 O
ATOM 13 C1' G B 55 -181.943 -49.903 19.382 1.00 0.18 C
ATOM 14 N9 G B 55 -182.324 -50.357 20.718 1.00 0.01 N
ATOM 15 C8 G B 55 -183.595 -50.357 21.214 1.00 0.01 C
ATOM 16 N7 G B 55 -183.673 -50.799 22.432 1.00 0.01 N
ATOM 17 C5 G B 55 -182.370 -51.111 22.774 1.00 0.01 C
ATOM 18 C6 G B 55 -181.837 -51.653 23.978 1.00 0.01 C
ATOM 19 O6 G B 55 -182.414 -51.969 25.016 1.00 0.01 O
ATOM 20 N1 G B 55 -180.473 -51.835 23.912 1.00 0.01 N
ATOM 21 C2 G B 55 -179.724 -51.528 22.814 1.00 0.01 C
ATOM 22 N2 G B 55 -178.422 -51.770 22.952 1.00 0.01 N
ATOM 23 N3 G B 55 -180.195 -51.039 21.675 1.00 0.01 N
ATOM 24 C4 G B 55 -181.525 -50.847 21.721 1.00 0.01 C
ATOM 25 P A B 56 -181.016 -49.344 14.950 1.00 7.27 P
ATOM 26 OP1 A B 56 -182.146 -50.063 14.318 1.00 7.27 O
ATOM 27 OP2 A B 56 -179.654 -49.646 14.487 1.00 7.27 O
ATOM 28 O5' A B 56 -181.248 -47.790 14.867 1.00 7.27 O
TER
Atoms:
OP1: (-188.135,-56.368,19.159)
OP2: (-186.172,-54.937,18.302)
C3': (-186.888,-54.651,23.299)
C1': (-184.495,-54.543,23.256)
C5': (-186.593,-56.611,21.738)
O6: (-179.283,-54.039,20.250)
O4': (-184.870,-55.907,23.230)
C8: (-183.536,-53.976,21.009)
C2: (-180.064,-54.949,23.514)
C6: (-180.010,-54.271,21.222)
C5: (-181.439,-54.202,21.325)
C4: (-182.031,-54.513,22.510)
P: (-186.692,-56.004,19.219)
C4': (-186.304,-56.035,23.085)
C2': (-185.757,-53.719,22.903)
O2': (-185.786,-52.468,23.574)
N1: (-179.381,-54.674,22.379)
N2: (-179.287,-55.315,24.545)
N3: (-181.393,-54.878,23.633)
N7: (-182.408,-53.866,20.389)
N9: (-183.386,-54.365,22.306)
O5': (-186.292,-55.682,20.712)
O3': (-187.223,-54.466,24.670)
OP2: (-186.172,-54.937,18.302)
C3': (-186.888,-54.651,23.299)
C1': (-184.495,-54.543,23.256)
C5': (-186.593,-56.611,21.738)
O6: (-179.283,-54.039,20.250)
O4': (-184.870,-55.907,23.230)
C8: (-183.536,-53.976,21.009)
C2: (-180.064,-54.949,23.514)
C6: (-180.010,-54.271,21.222)
C5: (-181.439,-54.202,21.325)
C4: (-182.031,-54.513,22.510)
P: (-186.692,-56.004,19.219)
C4': (-186.304,-56.035,23.085)
C2': (-185.757,-53.719,22.903)
O2': (-185.786,-52.468,23.574)
N1: (-179.381,-54.674,22.379)
N2: (-179.287,-55.315,24.545)
N3: (-181.393,-54.878,23.633)
N7: (-182.408,-53.866,20.389)
N9: (-183.386,-54.365,22.306)
O5': (-186.292,-55.682,20.712)
O3': (-187.223,-54.466,24.670)
OP1: (-186.422,-47.502,16.458)
OP2: (-187.606,-47.639,18.764)
C3': (-182.222,-50.298,17.052)
C1': (-181.943,-49.903,19.382)
C5': (-184.687,-49.659,17.350)
O6: (-182.414,-51.969,25.016)
O4': (-182.945,-49.019,18.927)
C8: (-183.595,-50.357,21.214)
C2: (-179.724,-51.528,22.814)
C6: (-181.837,-51.653,23.978)
C5: (-182.370,-51.111,22.774)
C4: (-181.525,-50.847,21.721)
P: (-186.345,-47.676,17.948)
C4': (-183.228,-49.260,17.515)
C2': (-181.865,-51.025,18.347)
O2': (-180.603,-51.663,18.348)
N1: (-180.473,-51.835,23.912)
N2: (-178.422,-51.770,22.952)
N3: (-180.195,-51.039,21.675)
N7: (-183.673,-50.799,22.432)
N9: (-182.324,-50.357,20.718)
O5': (-185.529,-49.010,18.309)
O3': (-181.086,-49.642,16.522)
OP2: (-187.606,-47.639,18.764)
C3': (-182.222,-50.298,17.052)
C1': (-181.943,-49.903,19.382)
C5': (-184.687,-49.659,17.350)
O6: (-182.414,-51.969,25.016)
O4': (-182.945,-49.019,18.927)
C8: (-183.595,-50.357,21.214)
C2: (-179.724,-51.528,22.814)
C6: (-181.837,-51.653,23.978)
C5: (-182.370,-51.111,22.774)
C4: (-181.525,-50.847,21.721)
P: (-186.345,-47.676,17.948)
C4': (-183.228,-49.260,17.515)
C2': (-181.865,-51.025,18.347)
O2': (-180.603,-51.663,18.348)
N1: (-180.473,-51.835,23.912)
N2: (-178.422,-51.770,22.952)
N3: (-180.195,-51.039,21.675)
N7: (-183.673,-50.799,22.432)
N9: (-182.324,-50.357,20.718)
O5': (-185.529,-49.010,18.309)
O3': (-181.086,-49.642,16.522)
Image (generated by PyMOL):