Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2388:2389
Extra
PDB:
ATOM 1 O3' G A 387 -39.576 54.561 58.954 1.00 61.15 O
ATOM 2 P G A 388 -39.462 55.598 60.141 1.00 62.03 P
ATOM 3 OP1 G A 388 -40.778 55.621 60.861 1.00 62.17 O
ATOM 4 OP2 G A 388 -38.928 56.864 59.557 1.00 62.40 O
ATOM 5 O5' G A 388 -38.373 54.925 61.043 1.00 61.34 O
ATOM 6 C5' G A 388 -38.168 53.535 60.997 1.00 60.97 C
ATOM 7 C4' G A 388 -36.883 53.208 61.660 1.00 60.43 C
ATOM 8 O4' G A 388 -35.793 53.608 60.800 1.00 60.52 O
ATOM 9 C3' G A 388 -36.649 53.960 62.945 1.00 60.23 C
ATOM 10 O3' G A 388 -37.281 53.316 64.049 1.00 59.95 O
ATOM 11 C2' G A 388 -35.125 54.049 63.037 1.00 59.92 C
ATOM 12 O2' G A 388 -34.603 52.870 63.609 1.00 59.42 O
ATOM 13 C1' G A 388 -34.712 54.086 61.560 1.00 60.22 C
ATOM 14 N9 G A 388 -34.367 55.435 61.055 1.00 60.62 N
ATOM 15 C8 G A 388 -35.215 56.133 60.242 1.00 61.18 C
ATOM 16 N7 G A 388 -34.736 57.278 59.836 1.00 61.50 N
ATOM 17 C5 G A 388 -33.464 57.340 60.381 1.00 61.13 C
ATOM 18 C6 G A 388 -32.470 58.360 60.279 1.00 61.27 C
ATOM 19 O6 G A 388 -32.502 59.434 59.674 1.00 61.75 O
ATOM 20 N1 G A 388 -31.326 58.048 60.988 1.00 60.81 N
ATOM 21 C2 G A 388 -31.155 56.892 61.696 1.00 60.29 C
ATOM 22 N2 G A 388 -29.977 56.761 62.308 1.00 59.94 N
ATOM 23 N3 G A 388 -32.073 55.934 61.788 1.00 60.16 N
ATOM 24 C4 G A 388 -33.211 56.198 61.113 1.00 60.59 C
ATOM 25 P G A 389 -37.541 54.108 65.432 1.00 65.77 P
ATOM 26 OP1 G A 389 -37.565 53.077 66.512 1.00 65.32 O
ATOM 27 OP2 G A 389 -38.744 55.001 65.247 1.00 66.30 O
ATOM 28 O5' G A 389 -36.210 54.969 65.559 1.00 65.67 O
TER
ATOM 1 O3' G B 388 -37.281 53.316 64.049 1.00 59.95 O
ATOM 2 P G B 389 -37.541 54.108 65.432 1.00 65.77 P
ATOM 3 OP1 G B 389 -37.565 53.077 66.512 1.00 65.32 O
ATOM 4 OP2 G B 389 -38.744 55.001 65.247 1.00 66.30 O
ATOM 5 O5' G B 389 -36.210 54.969 65.559 1.00 65.67 O
ATOM 6 C5' G B 389 -36.190 56.227 66.185 1.00 65.85 C
ATOM 7 C4' G B 389 -34.803 56.536 66.637 1.00 65.58 C
ATOM 8 O4' G B 389 -33.879 56.472 65.516 1.00 65.62 O
ATOM 9 C3' G B 389 -34.578 57.903 67.185 1.00 65.80 C
ATOM 10 O3' G B 389 -35.062 58.027 68.481 1.00 65.69 O
ATOM 11 C2' G B 389 -33.081 58.002 67.107 1.00 65.58 C
ATOM 12 O2' G B 389 -32.514 57.149 68.079 1.00 65.09 O
ATOM 13 C1' G B 389 -32.828 57.386 65.736 1.00 65.64 C
ATOM 14 N9 G B 389 -32.846 58.412 64.676 1.00 66.14 N
ATOM 15 C8 G B 389 -31.820 59.281 64.381 1.00 66.29 C
ATOM 16 N7 G B 389 -32.098 60.119 63.423 1.00 66.80 N
ATOM 17 C5 G B 389 -33.424 59.811 63.072 1.00 67.01 C
ATOM 18 C6 G B 389 -34.316 60.389 62.113 1.00 67.59 C
ATOM 19 O6 G B 389 -34.093 61.314 61.336 1.00 68.04 O
ATOM 20 N1 G B 389 -35.555 59.769 62.110 1.00 67.64 N
ATOM 21 C2 G B 389 -35.910 58.722 62.920 1.00 67.21 C
ATOM 22 N2 G B 389 -37.137 58.186 62.827 1.00 67.34 N
ATOM 23 N3 G B 389 -35.104 58.187 63.799 1.00 66.68 N
ATOM 24 C4 G B 389 -33.890 58.765 63.845 1.00 66.61 C
ATOM 25 P A B 390 -35.824 59.348 68.904 1.00 53.92 P
ATOM 26 OP1 A B 390 -36.387 59.113 70.255 1.00 53.75 O
ATOM 27 OP2 A B 390 -36.752 59.679 67.803 1.00 54.39 O
ATOM 28 O5' A B 390 -34.655 60.435 68.956 1.00 54.01 O
TER
ATOM 2 P G A 388 -39.462 55.598 60.141 1.00 62.03 P
ATOM 3 OP1 G A 388 -40.778 55.621 60.861 1.00 62.17 O
ATOM 4 OP2 G A 388 -38.928 56.864 59.557 1.00 62.40 O
ATOM 5 O5' G A 388 -38.373 54.925 61.043 1.00 61.34 O
ATOM 6 C5' G A 388 -38.168 53.535 60.997 1.00 60.97 C
ATOM 7 C4' G A 388 -36.883 53.208 61.660 1.00 60.43 C
ATOM 8 O4' G A 388 -35.793 53.608 60.800 1.00 60.52 O
ATOM 9 C3' G A 388 -36.649 53.960 62.945 1.00 60.23 C
ATOM 10 O3' G A 388 -37.281 53.316 64.049 1.00 59.95 O
ATOM 11 C2' G A 388 -35.125 54.049 63.037 1.00 59.92 C
ATOM 12 O2' G A 388 -34.603 52.870 63.609 1.00 59.42 O
ATOM 13 C1' G A 388 -34.712 54.086 61.560 1.00 60.22 C
ATOM 14 N9 G A 388 -34.367 55.435 61.055 1.00 60.62 N
ATOM 15 C8 G A 388 -35.215 56.133 60.242 1.00 61.18 C
ATOM 16 N7 G A 388 -34.736 57.278 59.836 1.00 61.50 N
ATOM 17 C5 G A 388 -33.464 57.340 60.381 1.00 61.13 C
ATOM 18 C6 G A 388 -32.470 58.360 60.279 1.00 61.27 C
ATOM 19 O6 G A 388 -32.502 59.434 59.674 1.00 61.75 O
ATOM 20 N1 G A 388 -31.326 58.048 60.988 1.00 60.81 N
ATOM 21 C2 G A 388 -31.155 56.892 61.696 1.00 60.29 C
ATOM 22 N2 G A 388 -29.977 56.761 62.308 1.00 59.94 N
ATOM 23 N3 G A 388 -32.073 55.934 61.788 1.00 60.16 N
ATOM 24 C4 G A 388 -33.211 56.198 61.113 1.00 60.59 C
ATOM 25 P G A 389 -37.541 54.108 65.432 1.00 65.77 P
ATOM 26 OP1 G A 389 -37.565 53.077 66.512 1.00 65.32 O
ATOM 27 OP2 G A 389 -38.744 55.001 65.247 1.00 66.30 O
ATOM 28 O5' G A 389 -36.210 54.969 65.559 1.00 65.67 O
TER
ATOM 1 O3' G B 388 -37.281 53.316 64.049 1.00 59.95 O
ATOM 2 P G B 389 -37.541 54.108 65.432 1.00 65.77 P
ATOM 3 OP1 G B 389 -37.565 53.077 66.512 1.00 65.32 O
ATOM 4 OP2 G B 389 -38.744 55.001 65.247 1.00 66.30 O
ATOM 5 O5' G B 389 -36.210 54.969 65.559 1.00 65.67 O
ATOM 6 C5' G B 389 -36.190 56.227 66.185 1.00 65.85 C
ATOM 7 C4' G B 389 -34.803 56.536 66.637 1.00 65.58 C
ATOM 8 O4' G B 389 -33.879 56.472 65.516 1.00 65.62 O
ATOM 9 C3' G B 389 -34.578 57.903 67.185 1.00 65.80 C
ATOM 10 O3' G B 389 -35.062 58.027 68.481 1.00 65.69 O
ATOM 11 C2' G B 389 -33.081 58.002 67.107 1.00 65.58 C
ATOM 12 O2' G B 389 -32.514 57.149 68.079 1.00 65.09 O
ATOM 13 C1' G B 389 -32.828 57.386 65.736 1.00 65.64 C
ATOM 14 N9 G B 389 -32.846 58.412 64.676 1.00 66.14 N
ATOM 15 C8 G B 389 -31.820 59.281 64.381 1.00 66.29 C
ATOM 16 N7 G B 389 -32.098 60.119 63.423 1.00 66.80 N
ATOM 17 C5 G B 389 -33.424 59.811 63.072 1.00 67.01 C
ATOM 18 C6 G B 389 -34.316 60.389 62.113 1.00 67.59 C
ATOM 19 O6 G B 389 -34.093 61.314 61.336 1.00 68.04 O
ATOM 20 N1 G B 389 -35.555 59.769 62.110 1.00 67.64 N
ATOM 21 C2 G B 389 -35.910 58.722 62.920 1.00 67.21 C
ATOM 22 N2 G B 389 -37.137 58.186 62.827 1.00 67.34 N
ATOM 23 N3 G B 389 -35.104 58.187 63.799 1.00 66.68 N
ATOM 24 C4 G B 389 -33.890 58.765 63.845 1.00 66.61 C
ATOM 25 P A B 390 -35.824 59.348 68.904 1.00 53.92 P
ATOM 26 OP1 A B 390 -36.387 59.113 70.255 1.00 53.75 O
ATOM 27 OP2 A B 390 -36.752 59.679 67.803 1.00 54.39 O
ATOM 28 O5' A B 390 -34.655 60.435 68.956 1.00 54.01 O
TER
Atoms:
OP1: (-40.778,55.621,60.861)
OP2: (-38.928,56.864,59.557)
C3': (-36.649,53.960,62.945)
C1': (-34.712,54.086,61.560)
C5': (-38.168,53.535,60.997)
O6: (-32.502,59.434,59.674)
O4': (-35.793,53.608,60.800)
C8: (-35.215,56.133,60.242)
C2: (-31.155,56.892,61.696)
C6: (-32.470,58.360,60.279)
C5: (-33.464,57.340,60.381)
C4: (-33.211,56.198,61.113)
P: (-39.462,55.598,60.141)
C4': (-36.883,53.208,61.660)
C2': (-35.125,54.049,63.037)
O2': (-34.603,52.870,63.609)
N1: (-31.326,58.048,60.988)
N2: (-29.977,56.761,62.308)
N3: (-32.073,55.934,61.788)
N7: (-34.736,57.278,59.836)
N9: (-34.367,55.435,61.055)
O5': (-38.373,54.925,61.043)
O3': (-37.281,53.316,64.049)
OP2: (-38.928,56.864,59.557)
C3': (-36.649,53.960,62.945)
C1': (-34.712,54.086,61.560)
C5': (-38.168,53.535,60.997)
O6: (-32.502,59.434,59.674)
O4': (-35.793,53.608,60.800)
C8: (-35.215,56.133,60.242)
C2: (-31.155,56.892,61.696)
C6: (-32.470,58.360,60.279)
C5: (-33.464,57.340,60.381)
C4: (-33.211,56.198,61.113)
P: (-39.462,55.598,60.141)
C4': (-36.883,53.208,61.660)
C2': (-35.125,54.049,63.037)
O2': (-34.603,52.870,63.609)
N1: (-31.326,58.048,60.988)
N2: (-29.977,56.761,62.308)
N3: (-32.073,55.934,61.788)
N7: (-34.736,57.278,59.836)
N9: (-34.367,55.435,61.055)
O5': (-38.373,54.925,61.043)
O3': (-37.281,53.316,64.049)
OP1: (-37.565,53.077,66.512)
OP2: (-38.744,55.001,65.247)
C3': (-34.578,57.903,67.185)
C1': (-32.828,57.386,65.736)
C5': (-36.190,56.227,66.185)
O6: (-34.093,61.314,61.336)
O4': (-33.879,56.472,65.516)
C8: (-31.820,59.281,64.381)
C2: (-35.910,58.722,62.920)
C6: (-34.316,60.389,62.113)
C5: (-33.424,59.811,63.072)
C4: (-33.890,58.765,63.845)
P: (-37.541,54.108,65.432)
C4': (-34.803,56.536,66.637)
C2': (-33.081,58.002,67.107)
O2': (-32.514,57.149,68.079)
N1: (-35.555,59.769,62.110)
N2: (-37.137,58.186,62.827)
N3: (-35.104,58.187,63.799)
N7: (-32.098,60.119,63.423)
N9: (-32.846,58.412,64.676)
O5': (-36.210,54.969,65.559)
O3': (-35.062,58.027,68.481)
OP2: (-38.744,55.001,65.247)
C3': (-34.578,57.903,67.185)
C1': (-32.828,57.386,65.736)
C5': (-36.190,56.227,66.185)
O6: (-34.093,61.314,61.336)
O4': (-33.879,56.472,65.516)
C8: (-31.820,59.281,64.381)
C2: (-35.910,58.722,62.920)
C6: (-34.316,60.389,62.113)
C5: (-33.424,59.811,63.072)
C4: (-33.890,58.765,63.845)
P: (-37.541,54.108,65.432)
C4': (-34.803,56.536,66.637)
C2': (-33.081,58.002,67.107)
O2': (-32.514,57.149,68.079)
N1: (-35.555,59.769,62.110)
N2: (-37.137,58.186,62.827)
N3: (-35.104,58.187,63.799)
N7: (-32.098,60.119,63.423)
N9: (-32.846,58.412,64.676)
O5': (-36.210,54.969,65.559)
O3': (-35.062,58.027,68.481)
Image (generated by PyMOL):