ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2827:2828

Extra

PDB:
ATOM 1 O3' A A 826 -70.816 85.203 123.633 1.00126.06 O
ATOM 2 P G A 827 -70.775 83.837 124.462 1.00104.54 P
ATOM 3 OP1 G A 827 -72.172 83.366 124.581 1.00104.44 O
ATOM 4 OP2 G A 827 -70.000 84.105 125.701 1.00104.54 O
ATOM 5 O5' G A 827 -69.941 82.856 123.500 1.00104.21 O
ATOM 6 C5' G A 827 -70.410 82.527 122.194 1.00104.18 C
ATOM 7 C4' G A 827 -69.313 81.970 121.304 1.00103.99 C
ATOM 8 O4' G A 827 -68.198 82.898 121.229 1.00104.26 O
ATOM 9 C3' G A 827 -68.650 80.670 121.750 1.00103.49 C
ATOM 10 O3' G A 827 -69.435 79.508 121.527 1.00103.14 O
ATOM 11 C2' G A 827 -67.357 80.692 120.952 1.00103.48 C
ATOM 12 O2' G A 827 -67.605 80.384 119.584 1.00103.45 O
ATOM 13 C1' G A 827 -66.988 82.170 121.059 1.00103.96 C
ATOM 14 N9 G A 827 -66.101 82.429 122.217 1.00103.96 N
ATOM 15 C8 G A 827 -66.378 83.104 123.390 1.00104.15 C
ATOM 16 N7 G A 827 -65.369 83.157 124.226 1.00104.09 N
ATOM 17 C5 G A 827 -64.357 82.464 123.580 1.00103.84 C
ATOM 18 C6 G A 827 -63.021 82.185 123.991 1.00103.67 C
ATOM 19 O6 G A 827 -62.457 82.505 125.045 1.00103.71 O
ATOM 20 N1 G A 827 -62.322 81.455 123.024 1.00103.43 N
ATOM 21 C2 G A 827 -62.851 81.041 121.819 1.00103.36 C
ATOM 22 N2 G A 827 -62.032 80.337 121.018 1.00103.12 N
ATOM 23 N3 G A 827 -64.091 81.296 121.425 1.00103.52 N
ATOM 24 C4 G A 827 -64.790 82.007 122.343 1.00103.75 C
ATOM 25 P G A 828 -69.443 78.328 122.622 1.00124.71 P
ATOM 26 OP1 G A 828 -70.786 77.689 122.569 1.00124.56 O
ATOM 27 OP2 G A 828 -68.983 78.917 123.907 1.00124.83 O
ATOM 28 O5' G A 828 -68.339 77.332 122.069 1.00124.35 O
TER

ATOM 1 O3' G B 827 -69.435 79.508 121.527 1.00103.14 O
ATOM 2 P G B 828 -69.443 78.328 122.622 1.00124.71 P
ATOM 3 OP1 G B 828 -70.786 77.689 122.569 1.00124.56 O
ATOM 4 OP2 G B 828 -68.983 78.917 123.907 1.00124.83 O
ATOM 5 O5' G B 828 -68.339 77.332 122.069 1.00124.35 O
ATOM 6 C5' G B 828 -67.042 77.284 122.649 1.00124.24 C
ATOM 7 C4' G B 828 -66.040 76.699 121.692 1.00124.04 C
ATOM 8 O4' G B 828 -64.994 77.666 121.424 1.00124.34 O
ATOM 9 C3' G B 828 -65.283 75.471 122.173 1.00123.57 C
ATOM 10 O3' G B 828 -66.031 74.270 122.071 1.00123.21 O
ATOM 11 C2' G B 828 -64.038 75.492 121.291 1.00123.56 C
ATOM 12 O2' G B 828 -64.325 75.010 119.979 1.00123.47 O
ATOM 13 C1' G B 828 -63.764 76.994 121.211 1.00124.06 C
ATOM 14 N9 G B 828 -62.798 77.425 122.243 1.00124.12 N
ATOM 15 C8 G B 828 -61.427 77.207 122.250 1.00123.99 C
ATOM 16 N7 G B 828 -60.830 77.673 123.317 1.00124.08 N
ATOM 17 C5 G B 828 -61.880 78.219 124.048 1.00124.28 C
ATOM 18 C6 G B 828 -61.871 78.881 125.296 1.00124.45 C
ATOM 19 O6 G B 828 -60.907 79.129 126.031 1.00124.47 O
ATOM 20 N1 G B 828 -63.159 79.273 125.664 1.00124.62 N
ATOM 21 C2 G B 828 -64.309 79.055 124.942 1.00124.63 C
ATOM 22 N2 G B 828 -65.455 79.504 125.472 1.00124.81 N
ATOM 23 N3 G B 828 -64.329 78.442 123.785 1.00124.47 N
ATOM 24 C4 G B 828 -63.098 78.060 123.411 1.00124.30 C
ATOM 25 P A B 829 -65.880 73.122 123.192 1.00147.07 P
ATOM 26 OP1 A B 829 -66.465 71.875 122.625 1.00146.71 O
ATOM 27 OP2 A B 829 -66.446 73.675 124.459 1.00147.23 O
ATOM 28 O5' A B 829 -64.302 72.959 123.332 1.00146.94 O
TER

Atoms:
OP1: (-72.172,83.366,124.581)
OP2: (-70.000,84.105,125.701)
C3': (-68.650,80.670,121.750)
C1': (-66.988,82.170,121.059)
C5': (-70.410,82.527,122.194)
O6: (-62.457,82.505,125.045)
O4': (-68.198,82.898,121.229)
C8: (-66.378,83.104,123.390)
C2: (-62.851,81.041,121.819)
C6: (-63.021,82.185,123.991)
C5: (-64.357,82.464,123.580)
C4: (-64.790,82.007,122.343)
P: (-70.775,83.837,124.462)
C4': (-69.313,81.970,121.304)
C2': (-67.357,80.692,120.952)
O2': (-67.605,80.384,119.584)
N1: (-62.322,81.455,123.024)
N2: (-62.032,80.337,121.018)
N3: (-64.091,81.296,121.425)
N7: (-65.369,83.157,124.226)
N9: (-66.101,82.429,122.217)
O5': (-69.941,82.856,123.500)
O3': (-69.435,79.508,121.527)
OP1: (-70.786,77.689,122.569)
OP2: (-68.983,78.917,123.907)
C3': (-65.283,75.471,122.173)
C1': (-63.764,76.994,121.211)
C5': (-67.042,77.284,122.649)
O6: (-60.907,79.129,126.031)
O4': (-64.994,77.666,121.424)
C8: (-61.427,77.207,122.250)
C2: (-64.309,79.055,124.942)
C6: (-61.871,78.881,125.296)
C5: (-61.880,78.219,124.048)
C4: (-63.098,78.060,123.411)
P: (-69.443,78.328,122.622)
C4': (-66.040,76.699,121.692)
C2': (-64.038,75.492,121.291)
O2': (-64.325,75.010,119.979)
N1: (-63.159,79.273,125.664)
N2: (-65.455,79.504,125.472)
N3: (-64.329,78.442,123.785)
N7: (-60.830,77.673,123.317)
N9: (-62.798,77.425,122.243)
O5': (-68.339,77.332,122.069)
O3': (-66.031,74.270,122.071)
Image (generated by PyMOL):
PyMOL image
show in jmol