Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11657:11674
Extra
PDB:
ATOM 1 O3' G A1656 -25.798 41.602 153.938 1.00 87.64 O
ATOM 2 P G A1657 -26.939 40.533 154.290 1.00 87.65 P
ATOM 3 OP1 G A1657 -28.104 41.298 154.822 1.00 88.53 O
ATOM 4 OP2 G A1657 -26.323 39.498 155.151 1.00 87.57 O
ATOM 5 O5' G A1657 -27.286 39.927 152.855 1.00 86.77 O
ATOM 6 C5' G A1657 -27.592 40.787 151.758 1.00 86.61 C
ATOM 7 C4' G A1657 -27.583 40.054 150.441 1.00 85.67 C
ATOM 8 O4' G A1657 -26.365 39.273 150.339 1.00 85.01 O
ATOM 9 C3' G A1657 -28.731 39.071 150.231 1.00 85.53 C
ATOM 10 O3' G A1657 -29.051 39.019 148.841 1.00 84.92 O
ATOM 11 C2' G A1657 -28.109 37.749 150.653 1.00 85.11 C
ATOM 12 O2' G A1657 -28.738 36.601 150.115 1.00 84.62 O
ATOM 13 C1' G A1657 -26.692 37.922 150.126 1.00 84.52 C
ATOM 14 N9 G A1657 -25.694 37.098 150.797 1.00 84.30 N
ATOM 15 C8 G A1657 -25.704 36.485 152.031 1.00 84.73 C
ATOM 16 N7 G A1657 -24.617 35.790 152.268 1.00 84.33 N
ATOM 17 C5 G A1657 -23.857 35.964 151.105 1.00 83.60 C
ATOM 18 C6 G A1657 -22.576 35.478 150.727 1.00 82.92 C
ATOM 19 O6 G A1657 -21.812 34.761 151.375 1.00 82.83 O
ATOM 20 N1 G A1657 -22.198 35.905 149.454 1.00 82.33 N
ATOM 21 C2 G A1657 -22.960 36.709 148.646 1.00 82.39 C
ATOM 22 N2 G A1657 -22.458 37.023 147.452 1.00 81.78 N
ATOM 23 N3 G A1657 -24.146 37.179 148.981 1.00 83.02 N
ATOM 24 C4 G A1657 -24.519 36.765 150.204 1.00 83.58 C
ATOM 25 P A A1658 -30.581 39.091 148.350 1.00 75.66 P
ATOM 26 OP1 A A1658 -31.270 40.136 149.169 1.00 76.64 O
ATOM 27 OP2 A A1658 -31.107 37.712 148.385 1.00 75.35 O
ATOM 28 O5' A A1658 -30.428 39.585 146.843 1.00 75.07 O
TER
ATOM 1 O3' A B1673 -18.863 28.220 145.786 1.00 73.28 O
ATOM 2 P G B1674 -18.336 29.508 146.615 1.00 79.47 P
ATOM 3 OP1 G B1674 -17.092 29.976 145.948 1.00 79.00 O
ATOM 4 OP2 G B1674 -18.262 29.112 148.040 1.00 80.03 O
ATOM 5 O5' G B1674 -19.510 30.577 146.421 1.00 79.97 O
ATOM 6 C5' G B1674 -19.584 31.393 145.259 1.00 79.67 C
ATOM 7 C4' G B1674 -20.333 32.675 145.525 1.00 80.37 C
ATOM 8 O4' G B1674 -21.540 32.361 146.277 1.00 80.93 O
ATOM 9 C3' G B1674 -19.581 33.722 146.360 1.00 80.92 C
ATOM 10 O3' G B1674 -19.999 35.038 145.967 1.00 81.25 O
ATOM 11 C2' G B1674 -20.101 33.434 147.763 1.00 81.63 C
ATOM 12 O2' G B1674 -19.953 34.496 148.685 1.00 82.39 O
ATOM 13 C1' G B1674 -21.563 33.137 147.457 1.00 81.74 C
ATOM 14 N9 G B1674 -22.260 32.393 148.501 1.00 82.20 N
ATOM 15 C8 G B1674 -21.803 31.331 149.238 1.00 82.12 C
ATOM 16 N7 G B1674 -22.678 30.914 150.118 1.00 82.65 N
ATOM 17 C5 G B1674 -23.781 31.765 149.949 1.00 83.10 C
ATOM 18 C6 G B1674 -25.046 31.816 150.615 1.00 83.78 C
ATOM 19 O6 G B1674 -25.489 31.118 151.523 1.00 84.14 O
ATOM 20 N1 G B1674 -25.841 32.831 150.123 1.00 84.06 N
ATOM 21 C2 G B1674 -25.461 33.679 149.127 1.00 83.73 C
ATOM 22 N2 G B1674 -26.376 34.581 148.793 1.00 84.10 N
ATOM 23 N3 G B1674 -24.306 33.663 148.499 1.00 83.11 N
ATOM 24 C4 G B1674 -23.519 32.683 148.954 1.00 82.83 C
ATOM 25 P A B1675 -18.973 36.290 146.012 1.00 79.04 P
ATOM 26 OP1 A B1675 -17.598 35.733 146.035 1.00 78.55 O
ATOM 27 OP2 A B1675 -19.379 37.182 147.113 1.00 79.97 O
ATOM 28 O5' A B1675 -19.260 37.003 144.610 1.00 78.68 O
TER
ATOM 2 P G A1657 -26.939 40.533 154.290 1.00 87.65 P
ATOM 3 OP1 G A1657 -28.104 41.298 154.822 1.00 88.53 O
ATOM 4 OP2 G A1657 -26.323 39.498 155.151 1.00 87.57 O
ATOM 5 O5' G A1657 -27.286 39.927 152.855 1.00 86.77 O
ATOM 6 C5' G A1657 -27.592 40.787 151.758 1.00 86.61 C
ATOM 7 C4' G A1657 -27.583 40.054 150.441 1.00 85.67 C
ATOM 8 O4' G A1657 -26.365 39.273 150.339 1.00 85.01 O
ATOM 9 C3' G A1657 -28.731 39.071 150.231 1.00 85.53 C
ATOM 10 O3' G A1657 -29.051 39.019 148.841 1.00 84.92 O
ATOM 11 C2' G A1657 -28.109 37.749 150.653 1.00 85.11 C
ATOM 12 O2' G A1657 -28.738 36.601 150.115 1.00 84.62 O
ATOM 13 C1' G A1657 -26.692 37.922 150.126 1.00 84.52 C
ATOM 14 N9 G A1657 -25.694 37.098 150.797 1.00 84.30 N
ATOM 15 C8 G A1657 -25.704 36.485 152.031 1.00 84.73 C
ATOM 16 N7 G A1657 -24.617 35.790 152.268 1.00 84.33 N
ATOM 17 C5 G A1657 -23.857 35.964 151.105 1.00 83.60 C
ATOM 18 C6 G A1657 -22.576 35.478 150.727 1.00 82.92 C
ATOM 19 O6 G A1657 -21.812 34.761 151.375 1.00 82.83 O
ATOM 20 N1 G A1657 -22.198 35.905 149.454 1.00 82.33 N
ATOM 21 C2 G A1657 -22.960 36.709 148.646 1.00 82.39 C
ATOM 22 N2 G A1657 -22.458 37.023 147.452 1.00 81.78 N
ATOM 23 N3 G A1657 -24.146 37.179 148.981 1.00 83.02 N
ATOM 24 C4 G A1657 -24.519 36.765 150.204 1.00 83.58 C
ATOM 25 P A A1658 -30.581 39.091 148.350 1.00 75.66 P
ATOM 26 OP1 A A1658 -31.270 40.136 149.169 1.00 76.64 O
ATOM 27 OP2 A A1658 -31.107 37.712 148.385 1.00 75.35 O
ATOM 28 O5' A A1658 -30.428 39.585 146.843 1.00 75.07 O
TER
ATOM 1 O3' A B1673 -18.863 28.220 145.786 1.00 73.28 O
ATOM 2 P G B1674 -18.336 29.508 146.615 1.00 79.47 P
ATOM 3 OP1 G B1674 -17.092 29.976 145.948 1.00 79.00 O
ATOM 4 OP2 G B1674 -18.262 29.112 148.040 1.00 80.03 O
ATOM 5 O5' G B1674 -19.510 30.577 146.421 1.00 79.97 O
ATOM 6 C5' G B1674 -19.584 31.393 145.259 1.00 79.67 C
ATOM 7 C4' G B1674 -20.333 32.675 145.525 1.00 80.37 C
ATOM 8 O4' G B1674 -21.540 32.361 146.277 1.00 80.93 O
ATOM 9 C3' G B1674 -19.581 33.722 146.360 1.00 80.92 C
ATOM 10 O3' G B1674 -19.999 35.038 145.967 1.00 81.25 O
ATOM 11 C2' G B1674 -20.101 33.434 147.763 1.00 81.63 C
ATOM 12 O2' G B1674 -19.953 34.496 148.685 1.00 82.39 O
ATOM 13 C1' G B1674 -21.563 33.137 147.457 1.00 81.74 C
ATOM 14 N9 G B1674 -22.260 32.393 148.501 1.00 82.20 N
ATOM 15 C8 G B1674 -21.803 31.331 149.238 1.00 82.12 C
ATOM 16 N7 G B1674 -22.678 30.914 150.118 1.00 82.65 N
ATOM 17 C5 G B1674 -23.781 31.765 149.949 1.00 83.10 C
ATOM 18 C6 G B1674 -25.046 31.816 150.615 1.00 83.78 C
ATOM 19 O6 G B1674 -25.489 31.118 151.523 1.00 84.14 O
ATOM 20 N1 G B1674 -25.841 32.831 150.123 1.00 84.06 N
ATOM 21 C2 G B1674 -25.461 33.679 149.127 1.00 83.73 C
ATOM 22 N2 G B1674 -26.376 34.581 148.793 1.00 84.10 N
ATOM 23 N3 G B1674 -24.306 33.663 148.499 1.00 83.11 N
ATOM 24 C4 G B1674 -23.519 32.683 148.954 1.00 82.83 C
ATOM 25 P A B1675 -18.973 36.290 146.012 1.00 79.04 P
ATOM 26 OP1 A B1675 -17.598 35.733 146.035 1.00 78.55 O
ATOM 27 OP2 A B1675 -19.379 37.182 147.113 1.00 79.97 O
ATOM 28 O5' A B1675 -19.260 37.003 144.610 1.00 78.68 O
TER
Atoms:
OP1: (-28.104,41.298,154.822)
OP2: (-26.323,39.498,155.151)
C3': (-28.731,39.071,150.231)
C1': (-26.692,37.922,150.126)
C5': (-27.592,40.787,151.758)
O6: (-21.812,34.761,151.375)
O4': (-26.365,39.273,150.339)
C8: (-25.704,36.485,152.031)
C2: (-22.960,36.709,148.646)
C6: (-22.576,35.478,150.727)
C5: (-23.857,35.964,151.105)
C4: (-24.519,36.765,150.204)
P: (-26.939,40.533,154.290)
C4': (-27.583,40.054,150.441)
C2': (-28.109,37.749,150.653)
O2': (-28.738,36.601,150.115)
N1: (-22.198,35.905,149.454)
N2: (-22.458,37.023,147.452)
N3: (-24.146,37.179,148.981)
N7: (-24.617,35.790,152.268)
N9: (-25.694,37.098,150.797)
O5': (-27.286,39.927,152.855)
O3': (-29.051,39.019,148.841)
OP2: (-26.323,39.498,155.151)
C3': (-28.731,39.071,150.231)
C1': (-26.692,37.922,150.126)
C5': (-27.592,40.787,151.758)
O6: (-21.812,34.761,151.375)
O4': (-26.365,39.273,150.339)
C8: (-25.704,36.485,152.031)
C2: (-22.960,36.709,148.646)
C6: (-22.576,35.478,150.727)
C5: (-23.857,35.964,151.105)
C4: (-24.519,36.765,150.204)
P: (-26.939,40.533,154.290)
C4': (-27.583,40.054,150.441)
C2': (-28.109,37.749,150.653)
O2': (-28.738,36.601,150.115)
N1: (-22.198,35.905,149.454)
N2: (-22.458,37.023,147.452)
N3: (-24.146,37.179,148.981)
N7: (-24.617,35.790,152.268)
N9: (-25.694,37.098,150.797)
O5': (-27.286,39.927,152.855)
O3': (-29.051,39.019,148.841)
OP1: (-17.092,29.976,145.948)
OP2: (-18.262,29.112,148.040)
C3': (-19.581,33.722,146.360)
C1': (-21.563,33.137,147.457)
C5': (-19.584,31.393,145.259)
O6: (-25.489,31.118,151.523)
O4': (-21.540,32.361,146.277)
C8: (-21.803,31.331,149.238)
C2: (-25.461,33.679,149.127)
C6: (-25.046,31.816,150.615)
C5: (-23.781,31.765,149.949)
C4: (-23.519,32.683,148.954)
P: (-18.336,29.508,146.615)
C4': (-20.333,32.675,145.525)
C2': (-20.101,33.434,147.763)
O2': (-19.953,34.496,148.685)
N1: (-25.841,32.831,150.123)
N2: (-26.376,34.581,148.793)
N3: (-24.306,33.663,148.499)
N7: (-22.678,30.914,150.118)
N9: (-22.260,32.393,148.501)
O5': (-19.510,30.577,146.421)
O3': (-19.999,35.038,145.967)
OP2: (-18.262,29.112,148.040)
C3': (-19.581,33.722,146.360)
C1': (-21.563,33.137,147.457)
C5': (-19.584,31.393,145.259)
O6: (-25.489,31.118,151.523)
O4': (-21.540,32.361,146.277)
C8: (-21.803,31.331,149.238)
C2: (-25.461,33.679,149.127)
C6: (-25.046,31.816,150.615)
C5: (-23.781,31.765,149.949)
C4: (-23.519,32.683,148.954)
P: (-18.336,29.508,146.615)
C4': (-20.333,32.675,145.525)
C2': (-20.101,33.434,147.763)
O2': (-19.953,34.496,148.685)
N1: (-25.841,32.831,150.123)
N2: (-26.376,34.581,148.793)
N3: (-24.306,33.663,148.499)
N7: (-22.678,30.914,150.118)
N9: (-22.260,32.393,148.501)
O5': (-19.510,30.577,146.421)
O3': (-19.999,35.038,145.967)
Image (generated by PyMOL):