Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:376:3100
Extra
PDB:
ATOM 1 O3' A A 75 36.974 -37.891 5.361 1.00 64.86 O
ATOM 2 P G A 76 37.735 -37.559 4.017 1.00 64.04 P
ATOM 3 OP1 G A 76 37.207 -36.266 3.510 1.00 64.17 O
ATOM 4 OP2 G A 76 37.634 -38.750 3.171 1.00 64.87 O
ATOM 5 O5' G A 76 39.226 -37.372 4.505 1.00 63.57 O
ATOM 6 C5' G A 76 39.628 -36.167 5.128 1.00 62.88 C
ATOM 7 C4' G A 76 39.316 -36.184 6.591 1.00 61.92 C
ATOM 8 O4' G A 76 39.889 -37.368 7.206 1.00 61.69 O
ATOM 9 C3' G A 76 39.862 -35.022 7.382 1.00 61.14 C
ATOM 10 O3' G A 76 38.970 -34.793 8.461 1.00 60.44 O
ATOM 11 C2' G A 76 41.153 -35.606 7.915 1.00 60.80 C
ATOM 12 O2' G A 76 41.700 -34.920 8.998 1.00 59.92 O
ATOM 13 C1' G A 76 40.650 -36.965 8.311 1.00 60.82 C
ATOM 14 N9 G A 76 41.672 -37.969 8.573 1.00 60.77 N
ATOM 15 C8 G A 76 42.870 -38.181 7.963 1.00 61.15 C
ATOM 16 N7 G A 76 43.517 -39.203 8.461 1.00 60.98 N
ATOM 17 C5 G A 76 42.669 -39.694 9.449 1.00 60.47 C
ATOM 18 C6 G A 76 42.820 -40.791 10.336 1.00 60.10 C
ATOM 19 O6 G A 76 43.759 -41.593 10.457 1.00 60.12 O
ATOM 20 N1 G A 76 41.722 -40.910 11.167 1.00 59.65 N
ATOM 21 C2 G A 76 40.640 -40.092 11.165 1.00 59.56 C
ATOM 22 N2 G A 76 39.701 -40.396 12.067 1.00 59.10 N
ATOM 23 N3 G A 76 40.502 -39.078 10.338 1.00 59.90 N
ATOM 24 C4 G A 76 41.541 -38.938 9.520 1.00 60.34 C
ATOM 25 P U A 77 39.218 -33.576 9.435 1.00 57.84 P
ATOM 26 OP1 U A 77 40.008 -32.603 8.666 1.00 58.13 O
ATOM 27 OP2 U A 77 39.786 -34.140 10.679 1.00 57.09 O
ATOM 28 O5' U A 77 37.741 -33.005 9.710 1.00 57.68 O
TER
ATOM 1 O3' C B 99 46.389 -41.127 16.930 1.00 50.19 O
ATOM 2 P G B 100 45.578 -41.891 15.759 1.00 47.05 P
ATOM 3 OP1 G B 100 45.592 -43.332 16.107 1.00 47.13 O
ATOM 4 OP2 G B 100 46.169 -41.475 14.451 1.00 47.77 O
ATOM 5 O5' G B 100 44.081 -41.306 15.908 1.00 46.93 O
ATOM 6 C5' G B 100 43.096 -42.014 16.667 1.00 46.67 C
ATOM 7 C4' G B 100 41.769 -41.280 16.754 1.00 46.57 C
ATOM 8 O4' G B 100 41.981 -39.851 16.836 1.00 46.22 O
ATOM 9 C3' G B 100 40.826 -41.437 15.577 1.00 47.43 C
ATOM 10 O3' G B 100 40.109 -42.638 15.606 1.00 47.72 O
ATOM 11 C2' G B 100 39.947 -40.211 15.701 1.00 47.17 C
ATOM 12 O2' G B 100 39.029 -40.363 16.759 1.00 46.62 O
ATOM 13 C1' G B 100 40.977 -39.177 16.105 1.00 46.63 C
ATOM 14 N9 G B 100 41.608 -38.622 14.930 1.00 47.21 N
ATOM 15 C8 G B 100 42.834 -39.026 14.496 1.00 47.47 C
ATOM 16 N7 G B 100 43.157 -38.411 13.412 1.00 48.03 N
ATOM 17 C5 G B 100 42.065 -37.580 13.141 1.00 48.13 C
ATOM 18 C6 G B 100 41.861 -36.672 12.082 1.00 48.66 C
ATOM 19 O6 G B 100 42.636 -36.422 11.133 1.00 49.18 O
ATOM 20 N1 G B 100 40.628 -36.061 12.193 1.00 48.56 N
ATOM 21 C2 G B 100 39.741 -36.289 13.187 1.00 48.04 C
ATOM 22 N2 G B 100 38.604 -35.578 13.098 1.00 48.06 N
ATOM 23 N3 G B 100 39.931 -37.125 14.178 1.00 47.54 N
ATOM 24 C4 G B 100 41.089 -37.725 14.071 1.00 47.63 C
ATOM 25 P A B 101 39.900 -43.451 14.261 1.00 53.74 P
ATOM 26 OP1 A B 101 40.535 -44.753 14.442 1.00 53.87 O
ATOM 27 OP2 A B 101 40.364 -42.577 13.164 1.00 54.22 O
ATOM 28 O5' A B 101 38.340 -43.641 14.190 1.00 53.97 O
TER
ATOM 2 P G A 76 37.735 -37.559 4.017 1.00 64.04 P
ATOM 3 OP1 G A 76 37.207 -36.266 3.510 1.00 64.17 O
ATOM 4 OP2 G A 76 37.634 -38.750 3.171 1.00 64.87 O
ATOM 5 O5' G A 76 39.226 -37.372 4.505 1.00 63.57 O
ATOM 6 C5' G A 76 39.628 -36.167 5.128 1.00 62.88 C
ATOM 7 C4' G A 76 39.316 -36.184 6.591 1.00 61.92 C
ATOM 8 O4' G A 76 39.889 -37.368 7.206 1.00 61.69 O
ATOM 9 C3' G A 76 39.862 -35.022 7.382 1.00 61.14 C
ATOM 10 O3' G A 76 38.970 -34.793 8.461 1.00 60.44 O
ATOM 11 C2' G A 76 41.153 -35.606 7.915 1.00 60.80 C
ATOM 12 O2' G A 76 41.700 -34.920 8.998 1.00 59.92 O
ATOM 13 C1' G A 76 40.650 -36.965 8.311 1.00 60.82 C
ATOM 14 N9 G A 76 41.672 -37.969 8.573 1.00 60.77 N
ATOM 15 C8 G A 76 42.870 -38.181 7.963 1.00 61.15 C
ATOM 16 N7 G A 76 43.517 -39.203 8.461 1.00 60.98 N
ATOM 17 C5 G A 76 42.669 -39.694 9.449 1.00 60.47 C
ATOM 18 C6 G A 76 42.820 -40.791 10.336 1.00 60.10 C
ATOM 19 O6 G A 76 43.759 -41.593 10.457 1.00 60.12 O
ATOM 20 N1 G A 76 41.722 -40.910 11.167 1.00 59.65 N
ATOM 21 C2 G A 76 40.640 -40.092 11.165 1.00 59.56 C
ATOM 22 N2 G A 76 39.701 -40.396 12.067 1.00 59.10 N
ATOM 23 N3 G A 76 40.502 -39.078 10.338 1.00 59.90 N
ATOM 24 C4 G A 76 41.541 -38.938 9.520 1.00 60.34 C
ATOM 25 P U A 77 39.218 -33.576 9.435 1.00 57.84 P
ATOM 26 OP1 U A 77 40.008 -32.603 8.666 1.00 58.13 O
ATOM 27 OP2 U A 77 39.786 -34.140 10.679 1.00 57.09 O
ATOM 28 O5' U A 77 37.741 -33.005 9.710 1.00 57.68 O
TER
ATOM 1 O3' C B 99 46.389 -41.127 16.930 1.00 50.19 O
ATOM 2 P G B 100 45.578 -41.891 15.759 1.00 47.05 P
ATOM 3 OP1 G B 100 45.592 -43.332 16.107 1.00 47.13 O
ATOM 4 OP2 G B 100 46.169 -41.475 14.451 1.00 47.77 O
ATOM 5 O5' G B 100 44.081 -41.306 15.908 1.00 46.93 O
ATOM 6 C5' G B 100 43.096 -42.014 16.667 1.00 46.67 C
ATOM 7 C4' G B 100 41.769 -41.280 16.754 1.00 46.57 C
ATOM 8 O4' G B 100 41.981 -39.851 16.836 1.00 46.22 O
ATOM 9 C3' G B 100 40.826 -41.437 15.577 1.00 47.43 C
ATOM 10 O3' G B 100 40.109 -42.638 15.606 1.00 47.72 O
ATOM 11 C2' G B 100 39.947 -40.211 15.701 1.00 47.17 C
ATOM 12 O2' G B 100 39.029 -40.363 16.759 1.00 46.62 O
ATOM 13 C1' G B 100 40.977 -39.177 16.105 1.00 46.63 C
ATOM 14 N9 G B 100 41.608 -38.622 14.930 1.00 47.21 N
ATOM 15 C8 G B 100 42.834 -39.026 14.496 1.00 47.47 C
ATOM 16 N7 G B 100 43.157 -38.411 13.412 1.00 48.03 N
ATOM 17 C5 G B 100 42.065 -37.580 13.141 1.00 48.13 C
ATOM 18 C6 G B 100 41.861 -36.672 12.082 1.00 48.66 C
ATOM 19 O6 G B 100 42.636 -36.422 11.133 1.00 49.18 O
ATOM 20 N1 G B 100 40.628 -36.061 12.193 1.00 48.56 N
ATOM 21 C2 G B 100 39.741 -36.289 13.187 1.00 48.04 C
ATOM 22 N2 G B 100 38.604 -35.578 13.098 1.00 48.06 N
ATOM 23 N3 G B 100 39.931 -37.125 14.178 1.00 47.54 N
ATOM 24 C4 G B 100 41.089 -37.725 14.071 1.00 47.63 C
ATOM 25 P A B 101 39.900 -43.451 14.261 1.00 53.74 P
ATOM 26 OP1 A B 101 40.535 -44.753 14.442 1.00 53.87 O
ATOM 27 OP2 A B 101 40.364 -42.577 13.164 1.00 54.22 O
ATOM 28 O5' A B 101 38.340 -43.641 14.190 1.00 53.97 O
TER
Atoms:
OP1: (37.207,-36.266,3.510)
OP2: (37.634,-38.750,3.171)
C3': (39.862,-35.022,7.382)
C1': (40.650,-36.965,8.311)
C5': (39.628,-36.167,5.128)
O6: (43.759,-41.593,10.457)
O4': (39.889,-37.368,7.206)
C8: (42.870,-38.181,7.963)
C2: (40.640,-40.092,11.165)
C6: (42.820,-40.791,10.336)
C5: (42.669,-39.694,9.449)
C4: (41.541,-38.938,9.520)
P: (37.735,-37.559,4.017)
C4': (39.316,-36.184,6.591)
C2': (41.153,-35.606,7.915)
O2': (41.700,-34.920,8.998)
N1: (41.722,-40.910,11.167)
N2: (39.701,-40.396,12.067)
N3: (40.502,-39.078,10.338)
N7: (43.517,-39.203,8.461)
N9: (41.672,-37.969,8.573)
O5': (39.226,-37.372,4.505)
O3': (38.970,-34.793,8.461)
OP2: (37.634,-38.750,3.171)
C3': (39.862,-35.022,7.382)
C1': (40.650,-36.965,8.311)
C5': (39.628,-36.167,5.128)
O6: (43.759,-41.593,10.457)
O4': (39.889,-37.368,7.206)
C8: (42.870,-38.181,7.963)
C2: (40.640,-40.092,11.165)
C6: (42.820,-40.791,10.336)
C5: (42.669,-39.694,9.449)
C4: (41.541,-38.938,9.520)
P: (37.735,-37.559,4.017)
C4': (39.316,-36.184,6.591)
C2': (41.153,-35.606,7.915)
O2': (41.700,-34.920,8.998)
N1: (41.722,-40.910,11.167)
N2: (39.701,-40.396,12.067)
N3: (40.502,-39.078,10.338)
N7: (43.517,-39.203,8.461)
N9: (41.672,-37.969,8.573)
O5': (39.226,-37.372,4.505)
O3': (38.970,-34.793,8.461)
OP1: (45.592,-43.332,16.107)
OP2: (46.169,-41.475,14.451)
C3': (40.826,-41.437,15.577)
C1': (40.977,-39.177,16.105)
C5': (43.096,-42.014,16.667)
O6: (42.636,-36.422,11.133)
O4': (41.981,-39.851,16.836)
C8: (42.834,-39.026,14.496)
C2: (39.741,-36.289,13.187)
C6: (41.861,-36.672,12.082)
C5: (42.065,-37.580,13.141)
C4: (41.089,-37.725,14.071)
P: (45.578,-41.891,15.759)
C4': (41.769,-41.280,16.754)
C2': (39.947,-40.211,15.701)
O2': (39.029,-40.363,16.759)
N1: (40.628,-36.061,12.193)
N2: (38.604,-35.578,13.098)
N3: (39.931,-37.125,14.178)
N7: (43.157,-38.411,13.412)
N9: (41.608,-38.622,14.930)
O5': (44.081,-41.306,15.908)
O3': (40.109,-42.638,15.606)
OP2: (46.169,-41.475,14.451)
C3': (40.826,-41.437,15.577)
C1': (40.977,-39.177,16.105)
C5': (43.096,-42.014,16.667)
O6: (42.636,-36.422,11.133)
O4': (41.981,-39.851,16.836)
C8: (42.834,-39.026,14.496)
C2: (39.741,-36.289,13.187)
C6: (41.861,-36.672,12.082)
C5: (42.065,-37.580,13.141)
C4: (41.089,-37.725,14.071)
P: (45.578,-41.891,15.759)
C4': (41.769,-41.280,16.754)
C2': (39.947,-40.211,15.701)
O2': (39.029,-40.363,16.759)
N1: (40.628,-36.061,12.193)
N2: (38.604,-35.578,13.098)
N3: (39.931,-37.125,14.178)
N7: (43.157,-38.411,13.412)
N9: (41.608,-38.622,14.930)
O5': (44.081,-41.306,15.908)
O3': (40.109,-42.638,15.606)
Image (generated by PyMOL):