ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 483D:A8:A17

Extra

PDB:
ATOM 1 O3' A A 7 -2.502 50.015 -18.878 0.66 14.16 O
ATOM 2 O3' G A 8 -0.433 45.668 -16.923 1.00 13.99 O
ATOM 3 N9 G A 8 -3.699 44.026 -18.900 1.00 14.77 N
ATOM 4 C8 G A 8 -3.825 43.359 -20.080 1.00 17.97 C
ATOM 5 N7 G A 8 -4.988 42.757 -20.215 1.00 18.91 N
ATOM 6 C5 G A 8 -5.674 43.047 -19.045 1.00 19.05 C
ATOM 7 C6 G A 8 -6.957 42.718 -18.550 1.00 17.64 C
ATOM 8 O6 G A 8 -7.864 42.015 -19.108 1.00 23.64 O
ATOM 9 N1 G A 8 -7.224 43.243 -17.294 1.00 17.81 N
ATOM 10 C2 G A 8 -6.359 44.015 -16.563 1.00 15.66 C
ATOM 11 N2 G A 8 -6.773 44.449 -15.357 1.00 16.23 N
ATOM 12 N3 G A 8 -5.155 44.338 -17.003 1.00 14.66 N
ATOM 13 C4 G A 8 -4.893 43.829 -18.222 1.00 15.27 C
ATOM 14 P G A 8 -1.619 49.817 -20.191 0.51 13.18 P
ATOM 15 OP1 G A 8 -0.185 50.054 -19.877 0.51 16.79 O
ATOM 16 OP2 G A 8 -2.247 50.586 -21.296 0.51 17.60 O
ATOM 17 O5' G A 8 -1.823 48.274 -20.553 0.51 14.17 O
ATOM 18 C5' G A 8 -0.878 47.261 -20.178 0.51 13.70 C
ATOM 19 C4' G A 8 -1.297 46.669 -18.864 0.51 13.12 C
ATOM 20 O4' G A 8 -2.637 46.116 -18.913 0.51 13.07 O
ATOM 21 C3' G A 8 -0.405 45.541 -18.352 0.51 13.84 C
ATOM 22 C2' G A 8 -1.207 44.289 -18.743 0.51 13.76 C
ATOM 23 O2' G A 8 -0.859 43.179 -17.935 0.51 12.21 O
ATOM 24 C1' G A 8 -2.598 44.807 -18.361 0.51 13.40 C
ATOM 25 P U A 9 0.657 44.863 -16.093 1.00 14.55 P
ATOM 26 OP1 U A 9 1.820 44.535 -16.945 1.00 17.84 O
ATOM 27 OP2 U A 9 -0.022 43.723 -15.399 1.00 15.10 O
ATOM 28 O5' U A 9 1.022 45.882 -14.926 1.00 14.22 O
TER

ATOM 1 O3' G B 16 -9.461 36.585 -15.506 1.00 11.73 O
ATOM 2 P G B 17 -9.812 38.002 -16.178 1.00 12.78 P
ATOM 3 OP1 G B 17 -11.281 38.104 -16.310 1.00 15.98 O
ATOM 4 OP2 G B 17 -8.935 38.184 -17.369 1.00 15.02 O
ATOM 5 O5' G B 17 -9.298 39.075 -15.108 1.00 11.97 O
ATOM 6 C5' G B 17 -9.854 39.203 -13.789 1.00 11.32 C
ATOM 7 C4' G B 17 -8.988 40.143 -12.978 1.00 10.81 C
ATOM 8 O4' G B 17 -7.628 39.639 -12.894 1.00 10.45 O
ATOM 9 C3' G B 17 -8.778 41.541 -13.592 1.00 10.30 C
ATOM 10 O3' G B 17 -9.930 42.314 -13.307 1.00 10.11 O
ATOM 11 C2' G B 17 -7.563 41.998 -12.796 1.00 9.59 C
ATOM 12 O2' G B 17 -7.872 42.189 -11.425 1.00 10.97 O
ATOM 13 C1' G B 17 -6.703 40.724 -12.886 1.00 10.11 C
ATOM 14 N9 G B 17 -5.942 40.688 -14.133 1.00 10.82 N
ATOM 15 C8 G B 17 -6.227 39.962 -15.264 1.00 10.32 C
ATOM 16 N7 G B 17 -5.351 40.153 -16.201 1.00 11.62 N
ATOM 17 C5 G B 17 -4.434 41.047 -15.676 1.00 10.69 C
ATOM 18 C6 G B 17 -3.268 41.631 -16.224 1.00 12.47 C
ATOM 19 O6 G B 17 -2.751 41.466 -17.369 1.00 16.56 O
ATOM 20 N1 G B 17 -2.615 42.497 -15.356 1.00 13.33 N
ATOM 21 C2 G B 17 -3.058 42.768 -14.089 1.00 10.13 C
ATOM 22 N2 G B 17 -2.331 43.624 -13.366 1.00 11.63 N
ATOM 23 N3 G B 17 -4.151 42.241 -13.545 1.00 9.93 N
ATOM 24 C4 G B 17 -4.790 41.392 -14.385 1.00 9.98 C
ATOM 25 P A B 18 -10.275 43.563 -14.240 1.00 11.18 P
ATOM 26 OP1 A B 18 -11.684 43.938 -14.000 1.00 13.21 O
ATOM 27 OP2 A B 18 -9.770 43.288 -15.604 1.00 12.75 O
ATOM 28 O5' A B 18 -9.315 44.687 -13.631 1.00 10.07 O
TER

Atoms:
OP1: (-0.185,50.054,-19.877)
OP2: (-2.247,50.586,-21.296)
C3': (-0.405,45.541,-18.352)
C1': (-2.598,44.807,-18.361)
C5': (-0.878,47.261,-20.178)
O6: (-7.864,42.015,-19.108)
O4': (-2.637,46.116,-18.913)
C8: (-3.825,43.359,-20.080)
C2: (-6.359,44.015,-16.563)
C6: (-6.957,42.718,-18.550)
C5: (-5.674,43.047,-19.045)
C4: (-4.893,43.829,-18.222)
N9: (-3.699,44.026,-18.900)
C4': (-1.297,46.669,-18.864)
C2': (-1.207,44.289,-18.743)
O2': (-0.859,43.179,-17.935)
N1: (-7.224,43.243,-17.294)
N2: (-6.773,44.449,-15.357)
N3: (-5.155,44.338,-17.003)
N7: (-4.988,42.757,-20.215)
P: (-1.619,49.817,-20.191)
O5': (-1.823,48.274,-20.553)
O3': (-0.433,45.668,-16.923)
OP1: (-11.281,38.104,-16.310)
OP2: (-8.935,38.184,-17.369)
C3': (-8.778,41.541,-13.592)
C1': (-6.703,40.724,-12.886)
C5': (-9.854,39.203,-13.789)
O6: (-2.751,41.466,-17.369)
O4': (-7.628,39.639,-12.894)
C8: (-6.227,39.962,-15.264)
C2: (-3.058,42.768,-14.089)
C6: (-3.268,41.631,-16.224)
C5: (-4.434,41.047,-15.676)
C4: (-4.790,41.392,-14.385)
P: (-9.812,38.002,-16.178)
C4': (-8.988,40.143,-12.978)
C2': (-7.563,41.998,-12.796)
O2': (-7.872,42.189,-11.425)
N1: (-2.615,42.497,-15.356)
N2: (-2.331,43.624,-13.366)
N3: (-4.151,42.241,-13.545)
N7: (-5.351,40.153,-16.201)
N9: (-5.942,40.688,-14.133)
O5': (-9.298,39.075,-15.108)
O3': (-9.930,42.314,-13.307)
Image (generated by PyMOL):
PyMOL image
show in jmol