Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01068:01206
Extra
PDB:
ATOM 1 O3' G A1067 13.067 104.844 127.022 1.00 45.02 O
ATOM 2 P U A1068 11.862 105.843 127.357 1.00 48.47 P
ATOM 3 OP1 U A1068 10.713 104.961 127.649 1.00 48.18 O
ATOM 4 OP2 U A1068 11.731 106.900 126.314 1.00 45.87 O
ATOM 5 O5' U A1068 12.342 106.509 128.719 1.00 49.22 O
ATOM 6 C5' U A1068 13.543 107.301 128.756 1.00 51.48 C
ATOM 7 C4' U A1068 14.652 106.528 129.419 1.00 51.46 C
ATOM 8 O4' U A1068 15.908 107.260 129.297 1.00 51.91 O
ATOM 9 C3' U A1068 14.448 106.291 130.906 1.00 52.13 C
ATOM 10 O3' U A1068 15.031 105.054 131.258 1.00 52.57 O
ATOM 11 C2' U A1068 15.254 107.421 131.535 1.00 52.99 C
ATOM 12 O2' U A1068 15.700 107.141 132.845 1.00 55.52 O
ATOM 13 C1' U A1068 16.441 107.492 130.584 1.00 52.30 C
ATOM 14 N1 U A1068 17.132 108.788 130.600 1.00 51.48 N
ATOM 15 C2 U A1068 18.470 108.794 130.953 1.00 51.80 C
ATOM 16 O2 U A1068 19.101 107.777 131.209 1.00 52.05 O
ATOM 17 N3 U A1068 19.050 110.035 130.989 1.00 51.63 N
ATOM 18 C4 U A1068 18.455 111.240 130.701 1.00 51.20 C
ATOM 19 O4 U A1068 19.110 112.276 130.809 1.00 51.62 O
ATOM 20 C5 U A1068 17.081 111.150 130.323 1.00 51.56 C
ATOM 21 C6 U A1068 16.480 109.957 130.288 1.00 51.30 C
ATOM 22 P G A1069 14.239 104.061 132.223 1.00 51.77 P
ATOM 23 OP1 G A1069 13.381 104.907 133.082 1.00 53.76 O
ATOM 24 OP2 G A1069 15.202 103.117 132.850 1.00 52.10 O
ATOM 25 O5' G A1069 13.301 103.254 131.229 1.00 52.14 O
TER
ATOM 1 O3' A B1205 22.332 104.369 133.344 1.00 51.12 O
ATOM 2 P A B1206 20.925 104.527 132.592 1.00 52.02 P
ATOM 3 OP1 A B1206 20.248 105.716 133.192 1.00 51.23 O
ATOM 4 OP2 A B1206 20.215 103.210 132.550 1.00 48.24 O
ATOM 5 O5' A B1206 21.367 104.913 131.109 1.00 48.89 O
ATOM 6 C5' A B1206 21.910 103.923 130.215 1.00 44.33 C
ATOM 7 C4' A B1206 23.216 104.400 129.635 1.00 40.49 C
ATOM 8 O4' A B1206 23.042 105.766 129.174 1.00 40.02 O
ATOM 9 C3' A B1206 24.416 104.427 130.577 1.00 39.98 C
ATOM 10 O3' A B1206 25.594 104.203 129.811 1.00 41.58 O
ATOM 11 C2' A B1206 24.425 105.872 131.058 1.00 40.32 C
ATOM 12 O2' A B1206 25.698 106.333 131.470 1.00 40.09 O
ATOM 13 C1' A B1206 23.997 106.601 129.790 1.00 39.89 C
ATOM 14 N9 A B1206 23.376 107.892 130.053 1.00 39.84 N
ATOM 15 C8 A B1206 22.084 108.143 130.434 1.00 39.84 C
ATOM 16 N7 A B1206 21.820 109.413 130.593 1.00 40.57 N
ATOM 17 C5 A B1206 23.019 110.043 130.298 1.00 40.26 C
ATOM 18 C6 A B1206 23.393 111.392 130.275 1.00 39.65 C
ATOM 19 N6 A B1206 22.568 112.392 130.589 1.00 39.16 N
ATOM 20 N1 A B1206 24.663 111.686 129.918 1.00 40.55 N
ATOM 21 C2 A B1206 25.494 110.682 129.620 1.00 41.06 C
ATOM 22 N3 A B1206 25.262 109.372 129.618 1.00 42.72 N
ATOM 23 C4 A B1206 23.988 109.117 129.966 1.00 40.94 C
ATOM 24 P A B1207 25.991 102.716 129.363 1.00 43.92 P
ATOM 25 OP1 A B1207 26.317 102.771 127.911 1.00 41.54 O
ATOM 26 OP2 A B1207 24.965 101.761 129.850 1.00 42.92 O
ATOM 27 O5' A B1207 27.334 102.425 130.165 1.00 46.39 O
TER
ATOM 2 P U A1068 11.862 105.843 127.357 1.00 48.47 P
ATOM 3 OP1 U A1068 10.713 104.961 127.649 1.00 48.18 O
ATOM 4 OP2 U A1068 11.731 106.900 126.314 1.00 45.87 O
ATOM 5 O5' U A1068 12.342 106.509 128.719 1.00 49.22 O
ATOM 6 C5' U A1068 13.543 107.301 128.756 1.00 51.48 C
ATOM 7 C4' U A1068 14.652 106.528 129.419 1.00 51.46 C
ATOM 8 O4' U A1068 15.908 107.260 129.297 1.00 51.91 O
ATOM 9 C3' U A1068 14.448 106.291 130.906 1.00 52.13 C
ATOM 10 O3' U A1068 15.031 105.054 131.258 1.00 52.57 O
ATOM 11 C2' U A1068 15.254 107.421 131.535 1.00 52.99 C
ATOM 12 O2' U A1068 15.700 107.141 132.845 1.00 55.52 O
ATOM 13 C1' U A1068 16.441 107.492 130.584 1.00 52.30 C
ATOM 14 N1 U A1068 17.132 108.788 130.600 1.00 51.48 N
ATOM 15 C2 U A1068 18.470 108.794 130.953 1.00 51.80 C
ATOM 16 O2 U A1068 19.101 107.777 131.209 1.00 52.05 O
ATOM 17 N3 U A1068 19.050 110.035 130.989 1.00 51.63 N
ATOM 18 C4 U A1068 18.455 111.240 130.701 1.00 51.20 C
ATOM 19 O4 U A1068 19.110 112.276 130.809 1.00 51.62 O
ATOM 20 C5 U A1068 17.081 111.150 130.323 1.00 51.56 C
ATOM 21 C6 U A1068 16.480 109.957 130.288 1.00 51.30 C
ATOM 22 P G A1069 14.239 104.061 132.223 1.00 51.77 P
ATOM 23 OP1 G A1069 13.381 104.907 133.082 1.00 53.76 O
ATOM 24 OP2 G A1069 15.202 103.117 132.850 1.00 52.10 O
ATOM 25 O5' G A1069 13.301 103.254 131.229 1.00 52.14 O
TER
ATOM 1 O3' A B1205 22.332 104.369 133.344 1.00 51.12 O
ATOM 2 P A B1206 20.925 104.527 132.592 1.00 52.02 P
ATOM 3 OP1 A B1206 20.248 105.716 133.192 1.00 51.23 O
ATOM 4 OP2 A B1206 20.215 103.210 132.550 1.00 48.24 O
ATOM 5 O5' A B1206 21.367 104.913 131.109 1.00 48.89 O
ATOM 6 C5' A B1206 21.910 103.923 130.215 1.00 44.33 C
ATOM 7 C4' A B1206 23.216 104.400 129.635 1.00 40.49 C
ATOM 8 O4' A B1206 23.042 105.766 129.174 1.00 40.02 O
ATOM 9 C3' A B1206 24.416 104.427 130.577 1.00 39.98 C
ATOM 10 O3' A B1206 25.594 104.203 129.811 1.00 41.58 O
ATOM 11 C2' A B1206 24.425 105.872 131.058 1.00 40.32 C
ATOM 12 O2' A B1206 25.698 106.333 131.470 1.00 40.09 O
ATOM 13 C1' A B1206 23.997 106.601 129.790 1.00 39.89 C
ATOM 14 N9 A B1206 23.376 107.892 130.053 1.00 39.84 N
ATOM 15 C8 A B1206 22.084 108.143 130.434 1.00 39.84 C
ATOM 16 N7 A B1206 21.820 109.413 130.593 1.00 40.57 N
ATOM 17 C5 A B1206 23.019 110.043 130.298 1.00 40.26 C
ATOM 18 C6 A B1206 23.393 111.392 130.275 1.00 39.65 C
ATOM 19 N6 A B1206 22.568 112.392 130.589 1.00 39.16 N
ATOM 20 N1 A B1206 24.663 111.686 129.918 1.00 40.55 N
ATOM 21 C2 A B1206 25.494 110.682 129.620 1.00 41.06 C
ATOM 22 N3 A B1206 25.262 109.372 129.618 1.00 42.72 N
ATOM 23 C4 A B1206 23.988 109.117 129.966 1.00 40.94 C
ATOM 24 P A B1207 25.991 102.716 129.363 1.00 43.92 P
ATOM 25 OP1 A B1207 26.317 102.771 127.911 1.00 41.54 O
ATOM 26 OP2 A B1207 24.965 101.761 129.850 1.00 42.92 O
ATOM 27 O5' A B1207 27.334 102.425 130.165 1.00 46.39 O
TER
Atoms:
C4: (18.455,111.240,130.701)
N3: (19.050,110.035,130.989)
OP1: (10.713,104.961,127.649)
OP2: (11.731,106.900,126.314)
C2: (18.470,108.794,130.953)
C1': (16.441,107.492,130.584)
C3': (14.448,106.291,130.906)
O5': (12.342,106.509,128.719)
O4': (15.908,107.260,129.297)
C5': (13.543,107.301,128.756)
P: (11.862,105.843,127.357)
C4': (14.652,106.528,129.419)
C2': (15.254,107.421,131.535)
O2': (15.700,107.141,132.845)
N1: (17.132,108.788,130.600)
O4: (19.110,112.276,130.809)
O2: (19.101,107.777,131.209)
C6: (16.480,109.957,130.288)
C5: (17.081,111.150,130.323)
O3': (15.031,105.054,131.258)
N3: (19.050,110.035,130.989)
OP1: (10.713,104.961,127.649)
OP2: (11.731,106.900,126.314)
C2: (18.470,108.794,130.953)
C1': (16.441,107.492,130.584)
C3': (14.448,106.291,130.906)
O5': (12.342,106.509,128.719)
O4': (15.908,107.260,129.297)
C5': (13.543,107.301,128.756)
P: (11.862,105.843,127.357)
C4': (14.652,106.528,129.419)
C2': (15.254,107.421,131.535)
O2': (15.700,107.141,132.845)
N1: (17.132,108.788,130.600)
O4: (19.110,112.276,130.809)
O2: (19.101,107.777,131.209)
C6: (16.480,109.957,130.288)
C5: (17.081,111.150,130.323)
O3': (15.031,105.054,131.258)
OP1: (20.248,105.716,133.192)
OP2: (20.215,103.210,132.550)
C3': (24.416,104.427,130.577)
C1': (23.997,106.601,129.790)
C5': (21.910,103.923,130.215)
O4': (23.042,105.766,129.174)
C8: (22.084,108.143,130.434)
O2': (25.698,106.333,131.470)
C6: (23.393,111.392,130.275)
C5: (23.019,110.043,130.298)
C4: (23.988,109.117,129.966)
P: (20.925,104.527,132.592)
C4': (23.216,104.400,129.635)
C2': (24.425,105.872,131.058)
C2: (25.494,110.682,129.620)
N1: (24.663,111.686,129.918)
N3: (25.262,109.372,129.618)
N6: (22.568,112.392,130.589)
N7: (21.820,109.413,130.593)
N9: (23.376,107.892,130.053)
O5': (21.367,104.913,131.109)
O3': (25.594,104.203,129.811)
OP2: (20.215,103.210,132.550)
C3': (24.416,104.427,130.577)
C1': (23.997,106.601,129.790)
C5': (21.910,103.923,130.215)
O4': (23.042,105.766,129.174)
C8: (22.084,108.143,130.434)
O2': (25.698,106.333,131.470)
C6: (23.393,111.392,130.275)
C5: (23.019,110.043,130.298)
C4: (23.988,109.117,129.966)
P: (20.925,104.527,132.592)
C4': (23.216,104.400,129.635)
C2': (24.425,105.872,131.058)
C2: (25.494,110.682,129.620)
N1: (24.663,111.686,129.918)
N3: (25.262,109.372,129.618)
N6: (22.568,112.392,130.589)
N7: (21.820,109.413,130.593)
N9: (23.376,107.892,130.053)
O5': (21.367,104.913,131.109)
O3': (25.594,104.203,129.811)
Image (generated by PyMOL):