Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B18:B20
Extra
PDB:
ATOM 1 O3' U A 17 -5.209 12.815 4.018 1.00 45.22 O
ATOM 2 P U A 18 -4.156 13.591 3.096 1.00 50.21 P
ATOM 3 OP1 U A 18 -3.620 12.634 2.102 1.00 53.50 O
ATOM 4 OP2 U A 18 -3.224 14.326 3.979 1.00 53.08 O
ATOM 5 O5' U A 18 -5.074 14.647 2.319 1.00 45.92 O
ATOM 6 C5' U A 18 -5.854 14.247 1.196 1.00 45.32 C
ATOM 7 C4' U A 18 -6.752 15.370 0.700 1.00 43.70 C
ATOM 8 O4' U A 18 -7.839 15.564 1.639 1.00 41.20 O
ATOM 9 C3' U A 18 -6.108 16.745 0.581 1.00 39.57 C
ATOM 10 O3' U A 18 -6.843 17.590 -0.306 1.00 38.51 O
ATOM 11 C2' U A 18 -6.281 17.263 2.003 1.00 43.50 C
ATOM 12 O2' U A 18 -6.153 18.668 2.067 1.00 37.60 O
ATOM 13 C1' U A 18 -7.732 16.851 2.218 1.00 43.03 C
ATOM 14 N1 U A 18 -8.173 16.722 3.627 1.00 39.78 N
ATOM 15 C2 U A 18 -9.498 16.955 3.916 1.00 43.23 C
ATOM 16 O2 U A 18 -10.311 17.273 3.066 1.00 42.24 O
ATOM 17 N3 U A 18 -9.838 16.803 5.237 1.00 44.18 N
ATOM 18 C4 U A 18 -8.996 16.443 6.274 1.00 45.15 C
ATOM 19 O4 U A 18 -9.442 16.347 7.414 1.00 46.31 O
ATOM 20 C5 U A 18 -7.627 16.214 5.890 1.00 42.69 C
ATOM 21 C6 U A 18 -7.275 16.356 4.607 1.00 45.81 C
ATOM 22 P C A 19 -7.459 17.091 -1.700 1.00 40.70 P
ATOM 23 OP1 C A 19 -6.476 16.186 -2.338 1.00 39.84 O
ATOM 24 OP2 C A 19 -7.935 18.286 -2.428 1.00 34.33 O
ATOM 25 O5' C A 19 -8.741 16.238 -1.259 1.00 42.50 O
TER
ATOM 1 O3' C B 19 -12.880 17.881 -0.473 1.00 45.28 O
ATOM 2 P A B 20 -13.318 19.158 0.387 1.00 49.81 P
ATOM 3 OP1 A B 20 -13.910 20.147 -0.542 1.00 43.62 O
ATOM 4 OP2 A B 20 -12.176 19.545 1.246 1.00 49.76 O
ATOM 5 O5' A B 20 -14.489 18.584 1.313 1.00 44.69 O
ATOM 6 C5' A B 20 -15.693 18.114 0.726 1.00 45.65 C
ATOM 7 C4' A B 20 -16.509 17.336 1.742 1.00 50.17 C
ATOM 8 O4' A B 20 -15.726 16.231 2.259 1.00 48.68 O
ATOM 9 C3' A B 20 -16.901 18.116 2.985 1.00 48.75 C
ATOM 10 O3' A B 20 -18.058 18.898 2.731 1.00 48.82 O
ATOM 11 C2' A B 20 -17.206 16.979 3.952 1.00 50.73 C
ATOM 12 O2' A B 20 -18.493 16.437 3.736 1.00 53.96 O
ATOM 13 C1' A B 20 -16.140 15.948 3.584 1.00 50.89 C
ATOM 14 N9 A B 20 -14.972 15.974 4.461 1.00 49.70 N
ATOM 15 C8 A B 20 -13.675 16.228 4.112 1.00 49.12 C
ATOM 16 N7 A B 20 -12.835 16.184 5.121 1.00 49.41 N
ATOM 17 C5 A B 20 -13.639 15.882 6.208 1.00 51.48 C
ATOM 18 C6 A B 20 -13.358 15.695 7.576 1.00 49.59 C
ATOM 19 N6 A B 20 -12.130 15.791 8.096 1.00 48.35 N
ATOM 20 N1 A B 20 -14.391 15.404 8.393 1.00 53.60 N
ATOM 21 C2 A B 20 -15.619 15.308 7.872 1.00 54.77 C
ATOM 22 N3 A B 20 -16.006 15.462 6.607 1.00 54.34 N
ATOM 23 C4 A B 20 -14.959 15.750 5.819 1.00 53.14 C
ATOM 24 P C B 21 -18.051 20.465 3.056 1.00 53.52 P
ATOM 25 OP1 C B 21 -19.424 20.974 2.845 1.00 56.53 O
ATOM 26 OP2 C B 21 -16.919 21.076 2.323 1.00 53.50 O
ATOM 27 O5' C B 21 -17.740 20.513 4.624 1.00 51.15 O
TER
ATOM 2 P U A 18 -4.156 13.591 3.096 1.00 50.21 P
ATOM 3 OP1 U A 18 -3.620 12.634 2.102 1.00 53.50 O
ATOM 4 OP2 U A 18 -3.224 14.326 3.979 1.00 53.08 O
ATOM 5 O5' U A 18 -5.074 14.647 2.319 1.00 45.92 O
ATOM 6 C5' U A 18 -5.854 14.247 1.196 1.00 45.32 C
ATOM 7 C4' U A 18 -6.752 15.370 0.700 1.00 43.70 C
ATOM 8 O4' U A 18 -7.839 15.564 1.639 1.00 41.20 O
ATOM 9 C3' U A 18 -6.108 16.745 0.581 1.00 39.57 C
ATOM 10 O3' U A 18 -6.843 17.590 -0.306 1.00 38.51 O
ATOM 11 C2' U A 18 -6.281 17.263 2.003 1.00 43.50 C
ATOM 12 O2' U A 18 -6.153 18.668 2.067 1.00 37.60 O
ATOM 13 C1' U A 18 -7.732 16.851 2.218 1.00 43.03 C
ATOM 14 N1 U A 18 -8.173 16.722 3.627 1.00 39.78 N
ATOM 15 C2 U A 18 -9.498 16.955 3.916 1.00 43.23 C
ATOM 16 O2 U A 18 -10.311 17.273 3.066 1.00 42.24 O
ATOM 17 N3 U A 18 -9.838 16.803 5.237 1.00 44.18 N
ATOM 18 C4 U A 18 -8.996 16.443 6.274 1.00 45.15 C
ATOM 19 O4 U A 18 -9.442 16.347 7.414 1.00 46.31 O
ATOM 20 C5 U A 18 -7.627 16.214 5.890 1.00 42.69 C
ATOM 21 C6 U A 18 -7.275 16.356 4.607 1.00 45.81 C
ATOM 22 P C A 19 -7.459 17.091 -1.700 1.00 40.70 P
ATOM 23 OP1 C A 19 -6.476 16.186 -2.338 1.00 39.84 O
ATOM 24 OP2 C A 19 -7.935 18.286 -2.428 1.00 34.33 O
ATOM 25 O5' C A 19 -8.741 16.238 -1.259 1.00 42.50 O
TER
ATOM 1 O3' C B 19 -12.880 17.881 -0.473 1.00 45.28 O
ATOM 2 P A B 20 -13.318 19.158 0.387 1.00 49.81 P
ATOM 3 OP1 A B 20 -13.910 20.147 -0.542 1.00 43.62 O
ATOM 4 OP2 A B 20 -12.176 19.545 1.246 1.00 49.76 O
ATOM 5 O5' A B 20 -14.489 18.584 1.313 1.00 44.69 O
ATOM 6 C5' A B 20 -15.693 18.114 0.726 1.00 45.65 C
ATOM 7 C4' A B 20 -16.509 17.336 1.742 1.00 50.17 C
ATOM 8 O4' A B 20 -15.726 16.231 2.259 1.00 48.68 O
ATOM 9 C3' A B 20 -16.901 18.116 2.985 1.00 48.75 C
ATOM 10 O3' A B 20 -18.058 18.898 2.731 1.00 48.82 O
ATOM 11 C2' A B 20 -17.206 16.979 3.952 1.00 50.73 C
ATOM 12 O2' A B 20 -18.493 16.437 3.736 1.00 53.96 O
ATOM 13 C1' A B 20 -16.140 15.948 3.584 1.00 50.89 C
ATOM 14 N9 A B 20 -14.972 15.974 4.461 1.00 49.70 N
ATOM 15 C8 A B 20 -13.675 16.228 4.112 1.00 49.12 C
ATOM 16 N7 A B 20 -12.835 16.184 5.121 1.00 49.41 N
ATOM 17 C5 A B 20 -13.639 15.882 6.208 1.00 51.48 C
ATOM 18 C6 A B 20 -13.358 15.695 7.576 1.00 49.59 C
ATOM 19 N6 A B 20 -12.130 15.791 8.096 1.00 48.35 N
ATOM 20 N1 A B 20 -14.391 15.404 8.393 1.00 53.60 N
ATOM 21 C2 A B 20 -15.619 15.308 7.872 1.00 54.77 C
ATOM 22 N3 A B 20 -16.006 15.462 6.607 1.00 54.34 N
ATOM 23 C4 A B 20 -14.959 15.750 5.819 1.00 53.14 C
ATOM 24 P C B 21 -18.051 20.465 3.056 1.00 53.52 P
ATOM 25 OP1 C B 21 -19.424 20.974 2.845 1.00 56.53 O
ATOM 26 OP2 C B 21 -16.919 21.076 2.323 1.00 53.50 O
ATOM 27 O5' C B 21 -17.740 20.513 4.624 1.00 51.15 O
TER
Atoms:
C4: (-8.996,16.443,6.274)
N3: (-9.838,16.803,5.237)
OP1: (-3.620,12.634,2.102)
OP2: (-3.224,14.326,3.979)
C2: (-9.498,16.955,3.916)
C1': (-7.732,16.851,2.218)
C3': (-6.108,16.745,0.581)
O5': (-5.074,14.647,2.319)
O4': (-7.839,15.564,1.639)
C5': (-5.854,14.247,1.196)
P: (-4.156,13.591,3.096)
C4': (-6.752,15.370,0.700)
C2': (-6.281,17.263,2.003)
O2': (-6.153,18.668,2.067)
N1: (-8.173,16.722,3.627)
O4: (-9.442,16.347,7.414)
O2: (-10.311,17.273,3.066)
C6: (-7.275,16.356,4.607)
C5: (-7.627,16.214,5.890)
O3': (-6.843,17.590,-0.306)
N3: (-9.838,16.803,5.237)
OP1: (-3.620,12.634,2.102)
OP2: (-3.224,14.326,3.979)
C2: (-9.498,16.955,3.916)
C1': (-7.732,16.851,2.218)
C3': (-6.108,16.745,0.581)
O5': (-5.074,14.647,2.319)
O4': (-7.839,15.564,1.639)
C5': (-5.854,14.247,1.196)
P: (-4.156,13.591,3.096)
C4': (-6.752,15.370,0.700)
C2': (-6.281,17.263,2.003)
O2': (-6.153,18.668,2.067)
N1: (-8.173,16.722,3.627)
O4: (-9.442,16.347,7.414)
O2: (-10.311,17.273,3.066)
C6: (-7.275,16.356,4.607)
C5: (-7.627,16.214,5.890)
O3': (-6.843,17.590,-0.306)
OP1: (-13.910,20.147,-0.542)
OP2: (-12.176,19.545,1.246)
C3': (-16.901,18.116,2.985)
C1': (-16.140,15.948,3.584)
C5': (-15.693,18.114,0.726)
O4': (-15.726,16.231,2.259)
C8: (-13.675,16.228,4.112)
O2': (-18.493,16.437,3.736)
C6: (-13.358,15.695,7.576)
C5: (-13.639,15.882,6.208)
C4: (-14.959,15.750,5.819)
P: (-13.318,19.158,0.387)
C4': (-16.509,17.336,1.742)
C2': (-17.206,16.979,3.952)
C2: (-15.619,15.308,7.872)
N1: (-14.391,15.404,8.393)
N3: (-16.006,15.462,6.607)
N6: (-12.130,15.791,8.096)
N7: (-12.835,16.184,5.121)
N9: (-14.972,15.974,4.461)
O5': (-14.489,18.584,1.313)
O3': (-18.058,18.898,2.731)
OP2: (-12.176,19.545,1.246)
C3': (-16.901,18.116,2.985)
C1': (-16.140,15.948,3.584)
C5': (-15.693,18.114,0.726)
O4': (-15.726,16.231,2.259)
C8: (-13.675,16.228,4.112)
O2': (-18.493,16.437,3.736)
C6: (-13.358,15.695,7.576)
C5: (-13.639,15.882,6.208)
C4: (-14.959,15.750,5.819)
P: (-13.318,19.158,0.387)
C4': (-16.509,17.336,1.742)
C2': (-17.206,16.979,3.952)
C2: (-15.619,15.308,7.872)
N1: (-14.391,15.404,8.393)
N3: (-16.006,15.462,6.607)
N6: (-12.130,15.791,8.096)
N7: (-12.835,16.184,5.121)
N9: (-14.972,15.974,4.461)
O5': (-14.489,18.584,1.313)
O3': (-18.058,18.898,2.731)
Image (generated by PyMOL):