Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B11:B32
Extra
PDB:
ATOM 1 O3' G A 10 -11.014 35.808 -8.477 1.00 29.25 O
ATOM 2 P U A 11 -10.996 34.215 -8.636 1.00 35.26 P
ATOM 3 OP1 U A 11 -9.603 33.813 -8.929 1.00 37.81 O
ATOM 4 OP2 U A 11 -12.099 33.836 -9.547 1.00 29.99 O
ATOM 5 O5' U A 11 -11.351 33.691 -7.170 1.00 31.09 O
ATOM 6 C5' U A 11 -10.462 33.920 -6.089 1.00 31.92 C
ATOM 7 C4' U A 11 -11.185 33.649 -4.785 1.00 33.01 C
ATOM 8 O4' U A 11 -12.316 34.542 -4.697 1.00 33.44 O
ATOM 9 C3' U A 11 -11.777 32.251 -4.657 1.00 30.56 C
ATOM 10 O3' U A 11 -10.837 31.413 -4.009 1.00 33.49 O
ATOM 11 C2' U A 11 -12.986 32.464 -3.751 1.00 34.06 C
ATOM 12 O2' U A 11 -12.685 32.164 -2.405 1.00 36.93 O
ATOM 13 C1' U A 11 -13.303 33.954 -3.878 1.00 34.14 C
ATOM 14 N1 U A 11 -14.634 34.219 -4.473 1.00 35.78 N
ATOM 15 C2 U A 11 -15.618 34.751 -3.671 1.00 38.61 C
ATOM 16 O2 U A 11 -15.446 35.017 -2.495 1.00 37.19 O
ATOM 17 N3 U A 11 -16.820 34.960 -4.298 1.00 37.11 N
ATOM 18 C4 U A 11 -17.126 34.693 -5.617 1.00 36.81 C
ATOM 19 O4 U A 11 -18.254 34.934 -6.034 1.00 39.45 O
ATOM 20 C5 U A 11 -16.045 34.139 -6.392 1.00 37.83 C
ATOM 21 C6 U A 11 -14.864 33.924 -5.801 1.00 36.73 C
ATOM 22 P G A 12 -10.588 29.906 -4.478 1.00 39.33 P
ATOM 23 OP1 G A 12 -11.033 29.784 -5.884 1.00 30.38 O
ATOM 24 OP2 G A 12 -11.125 28.994 -3.443 1.00 36.76 O
ATOM 25 O5' G A 12 -8.990 29.825 -4.451 1.00 31.83 O
TER
ATOM 1 O3' A B 31 -20.135 30.992 -0.945 1.00 51.64 O
ATOM 2 P A B 32 -20.687 31.146 0.548 1.00 55.06 P
ATOM 3 OP1 A B 32 -20.125 30.043 1.361 1.00 52.97 O
ATOM 4 OP2 A B 32 -22.153 31.327 0.461 1.00 52.52 O
ATOM 5 O5' A B 32 -20.024 32.514 1.046 1.00 53.68 O
ATOM 6 C5' A B 32 -19.808 32.740 2.434 1.00 51.85 C
ATOM 7 C4' A B 32 -19.416 34.183 2.695 1.00 48.64 C
ATOM 8 O4' A B 32 -18.470 34.620 1.689 1.00 46.82 O
ATOM 9 C3' A B 32 -20.569 35.174 2.631 1.00 54.80 C
ATOM 10 O3' A B 32 -21.117 35.336 3.932 1.00 58.21 O
ATOM 11 C2' A B 32 -19.885 36.454 2.162 1.00 50.85 C
ATOM 12 O2' A B 32 -19.306 37.151 3.246 1.00 49.07 O
ATOM 13 C1' A B 32 -18.779 35.931 1.248 1.00 49.75 C
ATOM 14 N9 A B 32 -19.096 35.854 -0.180 1.00 46.02 N
ATOM 15 C8 A B 32 -18.202 36.014 -1.201 1.00 42.01 C
ATOM 16 N7 A B 32 -18.726 35.887 -2.395 1.00 42.97 N
ATOM 17 C5 A B 32 -20.060 35.621 -2.145 1.00 45.21 C
ATOM 18 C6 A B 32 -21.152 35.385 -3.005 1.00 46.75 C
ATOM 19 N6 A B 32 -21.051 35.381 -4.340 1.00 45.34 N
ATOM 20 N1 A B 32 -22.354 35.154 -2.438 1.00 50.80 N
ATOM 21 C2 A B 32 -22.447 35.158 -1.104 1.00 49.72 C
ATOM 22 N3 A B 32 -21.494 35.366 -0.198 1.00 50.64 N
ATOM 23 C4 A B 32 -20.309 35.596 -0.785 1.00 46.86 C
ATOM 24 P G B 33 -22.640 34.943 4.224 1.00 61.87 P
ATOM 25 OP1 G B 33 -22.658 34.143 5.469 1.00 59.29 O
ATOM 26 OP2 G B 33 -23.220 34.392 2.977 1.00 57.77 O
ATOM 27 O5' G B 33 -23.323 36.354 4.536 1.00 54.55 O
TER
ATOM 2 P U A 11 -10.996 34.215 -8.636 1.00 35.26 P
ATOM 3 OP1 U A 11 -9.603 33.813 -8.929 1.00 37.81 O
ATOM 4 OP2 U A 11 -12.099 33.836 -9.547 1.00 29.99 O
ATOM 5 O5' U A 11 -11.351 33.691 -7.170 1.00 31.09 O
ATOM 6 C5' U A 11 -10.462 33.920 -6.089 1.00 31.92 C
ATOM 7 C4' U A 11 -11.185 33.649 -4.785 1.00 33.01 C
ATOM 8 O4' U A 11 -12.316 34.542 -4.697 1.00 33.44 O
ATOM 9 C3' U A 11 -11.777 32.251 -4.657 1.00 30.56 C
ATOM 10 O3' U A 11 -10.837 31.413 -4.009 1.00 33.49 O
ATOM 11 C2' U A 11 -12.986 32.464 -3.751 1.00 34.06 C
ATOM 12 O2' U A 11 -12.685 32.164 -2.405 1.00 36.93 O
ATOM 13 C1' U A 11 -13.303 33.954 -3.878 1.00 34.14 C
ATOM 14 N1 U A 11 -14.634 34.219 -4.473 1.00 35.78 N
ATOM 15 C2 U A 11 -15.618 34.751 -3.671 1.00 38.61 C
ATOM 16 O2 U A 11 -15.446 35.017 -2.495 1.00 37.19 O
ATOM 17 N3 U A 11 -16.820 34.960 -4.298 1.00 37.11 N
ATOM 18 C4 U A 11 -17.126 34.693 -5.617 1.00 36.81 C
ATOM 19 O4 U A 11 -18.254 34.934 -6.034 1.00 39.45 O
ATOM 20 C5 U A 11 -16.045 34.139 -6.392 1.00 37.83 C
ATOM 21 C6 U A 11 -14.864 33.924 -5.801 1.00 36.73 C
ATOM 22 P G A 12 -10.588 29.906 -4.478 1.00 39.33 P
ATOM 23 OP1 G A 12 -11.033 29.784 -5.884 1.00 30.38 O
ATOM 24 OP2 G A 12 -11.125 28.994 -3.443 1.00 36.76 O
ATOM 25 O5' G A 12 -8.990 29.825 -4.451 1.00 31.83 O
TER
ATOM 1 O3' A B 31 -20.135 30.992 -0.945 1.00 51.64 O
ATOM 2 P A B 32 -20.687 31.146 0.548 1.00 55.06 P
ATOM 3 OP1 A B 32 -20.125 30.043 1.361 1.00 52.97 O
ATOM 4 OP2 A B 32 -22.153 31.327 0.461 1.00 52.52 O
ATOM 5 O5' A B 32 -20.024 32.514 1.046 1.00 53.68 O
ATOM 6 C5' A B 32 -19.808 32.740 2.434 1.00 51.85 C
ATOM 7 C4' A B 32 -19.416 34.183 2.695 1.00 48.64 C
ATOM 8 O4' A B 32 -18.470 34.620 1.689 1.00 46.82 O
ATOM 9 C3' A B 32 -20.569 35.174 2.631 1.00 54.80 C
ATOM 10 O3' A B 32 -21.117 35.336 3.932 1.00 58.21 O
ATOM 11 C2' A B 32 -19.885 36.454 2.162 1.00 50.85 C
ATOM 12 O2' A B 32 -19.306 37.151 3.246 1.00 49.07 O
ATOM 13 C1' A B 32 -18.779 35.931 1.248 1.00 49.75 C
ATOM 14 N9 A B 32 -19.096 35.854 -0.180 1.00 46.02 N
ATOM 15 C8 A B 32 -18.202 36.014 -1.201 1.00 42.01 C
ATOM 16 N7 A B 32 -18.726 35.887 -2.395 1.00 42.97 N
ATOM 17 C5 A B 32 -20.060 35.621 -2.145 1.00 45.21 C
ATOM 18 C6 A B 32 -21.152 35.385 -3.005 1.00 46.75 C
ATOM 19 N6 A B 32 -21.051 35.381 -4.340 1.00 45.34 N
ATOM 20 N1 A B 32 -22.354 35.154 -2.438 1.00 50.80 N
ATOM 21 C2 A B 32 -22.447 35.158 -1.104 1.00 49.72 C
ATOM 22 N3 A B 32 -21.494 35.366 -0.198 1.00 50.64 N
ATOM 23 C4 A B 32 -20.309 35.596 -0.785 1.00 46.86 C
ATOM 24 P G B 33 -22.640 34.943 4.224 1.00 61.87 P
ATOM 25 OP1 G B 33 -22.658 34.143 5.469 1.00 59.29 O
ATOM 26 OP2 G B 33 -23.220 34.392 2.977 1.00 57.77 O
ATOM 27 O5' G B 33 -23.323 36.354 4.536 1.00 54.55 O
TER
Atoms:
C4: (-17.126,34.693,-5.617)
N3: (-16.820,34.960,-4.298)
OP1: (-9.603,33.813,-8.929)
OP2: (-12.099,33.836,-9.547)
C2: (-15.618,34.751,-3.671)
C1': (-13.303,33.954,-3.878)
C3': (-11.777,32.251,-4.657)
O5': (-11.351,33.691,-7.170)
O4': (-12.316,34.542,-4.697)
C5': (-10.462,33.920,-6.089)
P: (-10.996,34.215,-8.636)
C4': (-11.185,33.649,-4.785)
C2': (-12.986,32.464,-3.751)
O2': (-12.685,32.164,-2.405)
N1: (-14.634,34.219,-4.473)
O4: (-18.254,34.934,-6.034)
O2: (-15.446,35.017,-2.495)
C6: (-14.864,33.924,-5.801)
C5: (-16.045,34.139,-6.392)
O3': (-10.837,31.413,-4.009)
N3: (-16.820,34.960,-4.298)
OP1: (-9.603,33.813,-8.929)
OP2: (-12.099,33.836,-9.547)
C2: (-15.618,34.751,-3.671)
C1': (-13.303,33.954,-3.878)
C3': (-11.777,32.251,-4.657)
O5': (-11.351,33.691,-7.170)
O4': (-12.316,34.542,-4.697)
C5': (-10.462,33.920,-6.089)
P: (-10.996,34.215,-8.636)
C4': (-11.185,33.649,-4.785)
C2': (-12.986,32.464,-3.751)
O2': (-12.685,32.164,-2.405)
N1: (-14.634,34.219,-4.473)
O4: (-18.254,34.934,-6.034)
O2: (-15.446,35.017,-2.495)
C6: (-14.864,33.924,-5.801)
C5: (-16.045,34.139,-6.392)
O3': (-10.837,31.413,-4.009)
OP1: (-20.125,30.043,1.361)
OP2: (-22.153,31.327,0.461)
C3': (-20.569,35.174,2.631)
C1': (-18.779,35.931,1.248)
C5': (-19.808,32.740,2.434)
O4': (-18.470,34.620,1.689)
C8: (-18.202,36.014,-1.201)
O2': (-19.306,37.151,3.246)
C6: (-21.152,35.385,-3.005)
C5: (-20.060,35.621,-2.145)
C4: (-20.309,35.596,-0.785)
P: (-20.687,31.146,0.548)
C4': (-19.416,34.183,2.695)
C2': (-19.885,36.454,2.162)
C2: (-22.447,35.158,-1.104)
N1: (-22.354,35.154,-2.438)
N3: (-21.494,35.366,-0.198)
N6: (-21.051,35.381,-4.340)
N7: (-18.726,35.887,-2.395)
N9: (-19.096,35.854,-0.180)
O5': (-20.024,32.514,1.046)
O3': (-21.117,35.336,3.932)
OP2: (-22.153,31.327,0.461)
C3': (-20.569,35.174,2.631)
C1': (-18.779,35.931,1.248)
C5': (-19.808,32.740,2.434)
O4': (-18.470,34.620,1.689)
C8: (-18.202,36.014,-1.201)
O2': (-19.306,37.151,3.246)
C6: (-21.152,35.385,-3.005)
C5: (-20.060,35.621,-2.145)
C4: (-20.309,35.596,-0.785)
P: (-20.687,31.146,0.548)
C4': (-19.416,34.183,2.695)
C2': (-19.885,36.454,2.162)
C2: (-22.447,35.158,-1.104)
N1: (-22.354,35.154,-2.438)
N3: (-21.494,35.366,-0.198)
N6: (-21.051,35.381,-4.340)
N7: (-18.726,35.887,-2.395)
N9: (-19.096,35.854,-0.180)
O5': (-20.024,32.514,1.046)
O3': (-21.117,35.336,3.932)
Image (generated by PyMOL):