Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B18:B20
Extra
PDB:
ATOM 1 O3' U A 17 -5.126 -42.851 31.828 1.00 39.38 O
ATOM 2 P U A 18 -4.441 -41.901 30.738 1.00 39.53 P
ATOM 3 OP1 U A 18 -3.840 -42.791 29.713 1.00 40.24 O
ATOM 4 OP2 U A 18 -3.578 -40.943 31.465 1.00 40.96 O
ATOM 5 O5' U A 18 -5.654 -41.060 30.131 1.00 38.86 O
ATOM 6 C5' U A 18 -6.152 -41.298 28.797 1.00 38.96 C
ATOM 7 C4' U A 18 -7.018 -40.142 28.358 1.00 39.29 C
ATOM 8 O4' U A 18 -8.075 -39.974 29.333 1.00 39.75 O
ATOM 9 C3' U A 18 -6.301 -38.796 28.273 1.00 39.32 C
ATOM 10 O3' U A 18 -6.907 -37.949 27.280 1.00 39.27 O
ATOM 11 C2' U A 18 -6.593 -38.176 29.637 1.00 39.04 C
ATOM 12 O2' U A 18 -6.582 -36.766 29.622 1.00 40.71 O
ATOM 13 C1' U A 18 -8.006 -38.688 29.908 1.00 38.75 C
ATOM 14 N1 U A 18 -8.389 -38.820 31.322 1.00 37.38 N
ATOM 15 C2 U A 18 -9.715 -38.560 31.657 1.00 37.01 C
ATOM 16 O2 U A 18 -10.545 -38.152 30.855 1.00 36.33 O
ATOM 17 N3 U A 18 -10.032 -38.789 32.972 1.00 36.43 N
ATOM 18 C4 U A 18 -9.180 -39.222 33.969 1.00 36.90 C
ATOM 19 O4 U A 18 -9.629 -39.445 35.095 1.00 36.85 O
ATOM 20 C5 U A 18 -7.822 -39.422 33.553 1.00 36.50 C
ATOM 21 C6 U A 18 -7.482 -39.219 32.278 1.00 37.16 C
ATOM 22 P C A 19 -7.329 -38.538 25.839 1.00 38.41 P
ATOM 23 OP1 C A 19 -6.387 -39.628 25.472 1.00 39.05 O
ATOM 24 OP2 C A 19 -7.515 -37.395 24.917 1.00 37.83 O
ATOM 25 O5' C A 19 -8.774 -39.158 26.108 1.00 37.98 O
TER
ATOM 1 O3' C B 19 -12.872 -37.405 26.969 1.00 37.14 O
ATOM 2 P A B 20 -13.479 -36.221 27.875 1.00 38.26 P
ATOM 3 OP1 A B 20 -14.146 -35.212 27.002 1.00 36.95 O
ATOM 4 OP2 A B 20 -12.395 -35.784 28.800 1.00 37.90 O
ATOM 5 O5' A B 20 -14.601 -36.952 28.733 1.00 37.49 O
ATOM 6 C5' A B 20 -15.777 -37.478 28.108 1.00 38.27 C
ATOM 7 C4' A B 20 -16.654 -38.137 29.140 1.00 39.45 C
ATOM 8 O4' A B 20 -15.940 -39.246 29.735 1.00 40.02 O
ATOM 9 C3' A B 20 -17.044 -37.265 30.321 1.00 39.81 C
ATOM 10 O3' A B 20 -18.191 -36.490 30.033 1.00 40.06 O
ATOM 11 C2' A B 20 -17.326 -38.279 31.418 1.00 40.28 C
ATOM 12 O2' A B 20 -18.634 -38.807 31.350 1.00 40.57 O
ATOM 13 C1' A B 20 -16.320 -39.383 31.093 1.00 40.59 C
ATOM 14 N9 A B 20 -15.119 -39.354 31.928 1.00 41.43 N
ATOM 15 C8 A B 20 -13.825 -39.081 31.557 1.00 42.09 C
ATOM 16 N7 A B 20 -12.965 -39.159 32.543 1.00 42.35 N
ATOM 17 C5 A B 20 -13.743 -39.501 33.638 1.00 42.05 C
ATOM 18 C6 A B 20 -13.425 -39.733 34.979 1.00 42.29 C
ATOM 19 N6 A B 20 -12.186 -39.659 35.458 1.00 42.89 N
ATOM 20 N1 A B 20 -14.434 -40.049 35.823 1.00 42.14 N
ATOM 21 C2 A B 20 -15.676 -40.122 35.335 1.00 42.45 C
ATOM 22 N3 A B 20 -16.102 -39.928 34.087 1.00 42.88 N
ATOM 23 C4 A B 20 -15.072 -39.616 33.278 1.00 42.32 C
ATOM 24 P C B 21 -18.223 -34.938 30.448 1.00 40.87 P
ATOM 25 OP1 C B 21 -19.592 -34.430 30.188 1.00 40.73 O
ATOM 26 OP2 C B 21 -17.061 -34.272 29.804 1.00 40.76 O
ATOM 27 O5' C B 21 -17.993 -34.958 32.024 1.00 39.66 O
TER
ATOM 2 P U A 18 -4.441 -41.901 30.738 1.00 39.53 P
ATOM 3 OP1 U A 18 -3.840 -42.791 29.713 1.00 40.24 O
ATOM 4 OP2 U A 18 -3.578 -40.943 31.465 1.00 40.96 O
ATOM 5 O5' U A 18 -5.654 -41.060 30.131 1.00 38.86 O
ATOM 6 C5' U A 18 -6.152 -41.298 28.797 1.00 38.96 C
ATOM 7 C4' U A 18 -7.018 -40.142 28.358 1.00 39.29 C
ATOM 8 O4' U A 18 -8.075 -39.974 29.333 1.00 39.75 O
ATOM 9 C3' U A 18 -6.301 -38.796 28.273 1.00 39.32 C
ATOM 10 O3' U A 18 -6.907 -37.949 27.280 1.00 39.27 O
ATOM 11 C2' U A 18 -6.593 -38.176 29.637 1.00 39.04 C
ATOM 12 O2' U A 18 -6.582 -36.766 29.622 1.00 40.71 O
ATOM 13 C1' U A 18 -8.006 -38.688 29.908 1.00 38.75 C
ATOM 14 N1 U A 18 -8.389 -38.820 31.322 1.00 37.38 N
ATOM 15 C2 U A 18 -9.715 -38.560 31.657 1.00 37.01 C
ATOM 16 O2 U A 18 -10.545 -38.152 30.855 1.00 36.33 O
ATOM 17 N3 U A 18 -10.032 -38.789 32.972 1.00 36.43 N
ATOM 18 C4 U A 18 -9.180 -39.222 33.969 1.00 36.90 C
ATOM 19 O4 U A 18 -9.629 -39.445 35.095 1.00 36.85 O
ATOM 20 C5 U A 18 -7.822 -39.422 33.553 1.00 36.50 C
ATOM 21 C6 U A 18 -7.482 -39.219 32.278 1.00 37.16 C
ATOM 22 P C A 19 -7.329 -38.538 25.839 1.00 38.41 P
ATOM 23 OP1 C A 19 -6.387 -39.628 25.472 1.00 39.05 O
ATOM 24 OP2 C A 19 -7.515 -37.395 24.917 1.00 37.83 O
ATOM 25 O5' C A 19 -8.774 -39.158 26.108 1.00 37.98 O
TER
ATOM 1 O3' C B 19 -12.872 -37.405 26.969 1.00 37.14 O
ATOM 2 P A B 20 -13.479 -36.221 27.875 1.00 38.26 P
ATOM 3 OP1 A B 20 -14.146 -35.212 27.002 1.00 36.95 O
ATOM 4 OP2 A B 20 -12.395 -35.784 28.800 1.00 37.90 O
ATOM 5 O5' A B 20 -14.601 -36.952 28.733 1.00 37.49 O
ATOM 6 C5' A B 20 -15.777 -37.478 28.108 1.00 38.27 C
ATOM 7 C4' A B 20 -16.654 -38.137 29.140 1.00 39.45 C
ATOM 8 O4' A B 20 -15.940 -39.246 29.735 1.00 40.02 O
ATOM 9 C3' A B 20 -17.044 -37.265 30.321 1.00 39.81 C
ATOM 10 O3' A B 20 -18.191 -36.490 30.033 1.00 40.06 O
ATOM 11 C2' A B 20 -17.326 -38.279 31.418 1.00 40.28 C
ATOM 12 O2' A B 20 -18.634 -38.807 31.350 1.00 40.57 O
ATOM 13 C1' A B 20 -16.320 -39.383 31.093 1.00 40.59 C
ATOM 14 N9 A B 20 -15.119 -39.354 31.928 1.00 41.43 N
ATOM 15 C8 A B 20 -13.825 -39.081 31.557 1.00 42.09 C
ATOM 16 N7 A B 20 -12.965 -39.159 32.543 1.00 42.35 N
ATOM 17 C5 A B 20 -13.743 -39.501 33.638 1.00 42.05 C
ATOM 18 C6 A B 20 -13.425 -39.733 34.979 1.00 42.29 C
ATOM 19 N6 A B 20 -12.186 -39.659 35.458 1.00 42.89 N
ATOM 20 N1 A B 20 -14.434 -40.049 35.823 1.00 42.14 N
ATOM 21 C2 A B 20 -15.676 -40.122 35.335 1.00 42.45 C
ATOM 22 N3 A B 20 -16.102 -39.928 34.087 1.00 42.88 N
ATOM 23 C4 A B 20 -15.072 -39.616 33.278 1.00 42.32 C
ATOM 24 P C B 21 -18.223 -34.938 30.448 1.00 40.87 P
ATOM 25 OP1 C B 21 -19.592 -34.430 30.188 1.00 40.73 O
ATOM 26 OP2 C B 21 -17.061 -34.272 29.804 1.00 40.76 O
ATOM 27 O5' C B 21 -17.993 -34.958 32.024 1.00 39.66 O
TER
Atoms:
C4: (-9.180,-39.222,33.969)
N3: (-10.032,-38.789,32.972)
OP1: (-3.840,-42.791,29.713)
OP2: (-3.578,-40.943,31.465)
C2: (-9.715,-38.560,31.657)
C1': (-8.006,-38.688,29.908)
C3': (-6.301,-38.796,28.273)
O5': (-5.654,-41.060,30.131)
O4': (-8.075,-39.974,29.333)
C5': (-6.152,-41.298,28.797)
P: (-4.441,-41.901,30.738)
C4': (-7.018,-40.142,28.358)
C2': (-6.593,-38.176,29.637)
O2': (-6.582,-36.766,29.622)
N1: (-8.389,-38.820,31.322)
O4: (-9.629,-39.445,35.095)
O2: (-10.545,-38.152,30.855)
C6: (-7.482,-39.219,32.278)
C5: (-7.822,-39.422,33.553)
O3': (-6.907,-37.949,27.280)
N3: (-10.032,-38.789,32.972)
OP1: (-3.840,-42.791,29.713)
OP2: (-3.578,-40.943,31.465)
C2: (-9.715,-38.560,31.657)
C1': (-8.006,-38.688,29.908)
C3': (-6.301,-38.796,28.273)
O5': (-5.654,-41.060,30.131)
O4': (-8.075,-39.974,29.333)
C5': (-6.152,-41.298,28.797)
P: (-4.441,-41.901,30.738)
C4': (-7.018,-40.142,28.358)
C2': (-6.593,-38.176,29.637)
O2': (-6.582,-36.766,29.622)
N1: (-8.389,-38.820,31.322)
O4: (-9.629,-39.445,35.095)
O2: (-10.545,-38.152,30.855)
C6: (-7.482,-39.219,32.278)
C5: (-7.822,-39.422,33.553)
O3': (-6.907,-37.949,27.280)
OP1: (-14.146,-35.212,27.002)
OP2: (-12.395,-35.784,28.800)
C3': (-17.044,-37.265,30.321)
C1': (-16.320,-39.383,31.093)
C5': (-15.777,-37.478,28.108)
O4': (-15.940,-39.246,29.735)
C8: (-13.825,-39.081,31.557)
O2': (-18.634,-38.807,31.350)
C6: (-13.425,-39.733,34.979)
C5: (-13.743,-39.501,33.638)
C4: (-15.072,-39.616,33.278)
P: (-13.479,-36.221,27.875)
C4': (-16.654,-38.137,29.140)
C2': (-17.326,-38.279,31.418)
C2: (-15.676,-40.122,35.335)
N1: (-14.434,-40.049,35.823)
N3: (-16.102,-39.928,34.087)
N6: (-12.186,-39.659,35.458)
N7: (-12.965,-39.159,32.543)
N9: (-15.119,-39.354,31.928)
O5': (-14.601,-36.952,28.733)
O3': (-18.191,-36.490,30.033)
OP2: (-12.395,-35.784,28.800)
C3': (-17.044,-37.265,30.321)
C1': (-16.320,-39.383,31.093)
C5': (-15.777,-37.478,28.108)
O4': (-15.940,-39.246,29.735)
C8: (-13.825,-39.081,31.557)
O2': (-18.634,-38.807,31.350)
C6: (-13.425,-39.733,34.979)
C5: (-13.743,-39.501,33.638)
C4: (-15.072,-39.616,33.278)
P: (-13.479,-36.221,27.875)
C4': (-16.654,-38.137,29.140)
C2': (-17.326,-38.279,31.418)
C2: (-15.676,-40.122,35.335)
N1: (-14.434,-40.049,35.823)
N3: (-16.102,-39.928,34.087)
N6: (-12.186,-39.659,35.458)
N7: (-12.965,-39.159,32.543)
N9: (-15.119,-39.354,31.928)
O5': (-14.601,-36.952,28.733)
O3': (-18.191,-36.490,30.033)
Image (generated by PyMOL):