ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3P22:E11:F8

Extra

PDB:
ATOM 1 O3' U A 10 7.205 -9.989 16.460 1.00 69.00 O
ATOM 2 P U A 11 7.015 -11.311 17.350 1.00 70.61 P
ATOM 3 OP1 U A 11 6.411 -10.895 18.640 1.00 75.29 O
ATOM 4 OP2 U A 11 8.276 -12.089 17.354 1.00 67.61 O
ATOM 5 O5' U A 11 5.945 -12.152 16.533 1.00 67.96 O
ATOM 6 C5' U A 11 4.654 -11.664 16.408 1.00 69.91 C
ATOM 7 C4' U A 11 4.018 -12.344 15.231 1.00 68.52 C
ATOM 8 O4' U A 11 4.815 -12.096 14.047 1.00 66.44 O
ATOM 9 C3' U A 11 3.986 -13.853 15.320 1.00 67.16 C
ATOM 10 O3' U A 11 2.947 -14.272 16.159 1.00 67.98 O
ATOM 11 C2' U A 11 3.704 -14.163 13.862 1.00 66.31 C
ATOM 12 O2' U A 11 2.368 -13.917 13.505 1.00 68.53 O
ATOM 13 C1' U A 11 4.629 -13.176 13.153 1.00 65.23 C
ATOM 14 N1 U A 11 5.940 -13.823 12.839 1.00 63.49 N
ATOM 15 C2 U A 11 5.980 -14.768 11.832 1.00 62.96 C
ATOM 16 O2 U A 11 5.003 -15.086 11.169 1.00 64.51 O
ATOM 17 N3 U A 11 7.214 -15.339 11.624 1.00 61.73 N
ATOM 18 C4 U A 11 8.382 -15.065 12.310 1.00 61.27 C
ATOM 19 O4 U A 11 9.412 -15.658 12.004 1.00 60.16 O
ATOM 20 C5 U A 11 8.256 -14.072 13.351 1.00 61.85 C
ATOM 21 C6 U A 11 7.066 -13.507 13.573 1.00 62.86 C
ATOM 22 P C A 12 3.054 -15.643 16.970 1.00 61.35 P
ATOM 23 OP1 C A 12 1.724 -15.860 17.588 1.00 63.18 O
ATOM 24 OP2 C A 12 4.253 -15.625 17.844 1.00 57.63 O
ATOM 25 O5' C A 12 3.324 -16.739 15.836 1.00 60.36 O
TER

ATOM 1 O3' A B 7 1.010 -14.119 9.446 1.00 65.24 O
ATOM 2 P A B 8 0.758 -15.404 10.374 1.00 66.09 P
ATOM 3 OP1 A B 8 -0.669 -15.473 10.772 1.00 67.56 O
ATOM 4 OP2 A B 8 1.792 -15.458 11.420 1.00 65.21 O
ATOM 5 O5' A B 8 1.076 -16.602 9.382 1.00 65.57 O
ATOM 6 C5' A B 8 1.122 -17.902 9.910 1.00 66.56 C
ATOM 7 C4' A B 8 1.801 -18.841 8.950 1.00 66.08 C
ATOM 8 O4' A B 8 2.970 -18.216 8.350 1.00 63.72 O
ATOM 9 C3' A B 8 2.354 -20.068 9.647 1.00 66.37 C
ATOM 10 O3' A B 8 1.294 -21.004 9.885 1.00 69.69 O
ATOM 11 C2' A B 8 3.406 -20.545 8.646 1.00 64.11 C
ATOM 12 O2' A B 8 2.854 -21.333 7.612 1.00 65.76 O
ATOM 13 C1' A B 8 3.949 -19.214 8.094 1.00 62.06 C
ATOM 14 N9 A B 8 5.209 -18.787 8.712 1.00 59.24 N
ATOM 15 C8 A B 8 5.430 -17.616 9.387 1.00 57.19 C
ATOM 16 N7 A B 8 6.652 -17.495 9.841 1.00 54.77 N
ATOM 17 C5 A B 8 7.272 -18.671 9.450 1.00 55.04 C
ATOM 18 C6 A B 8 8.579 -19.154 9.626 1.00 54.42 C
ATOM 19 N6 A B 8 9.522 -18.464 10.281 1.00 53.37 N
ATOM 20 N1 A B 8 8.888 -20.367 9.103 1.00 54.51 N
ATOM 21 C2 A B 8 7.946 -21.050 8.449 1.00 54.67 C
ATOM 22 N3 A B 8 6.686 -20.688 8.220 1.00 56.84 N
ATOM 23 C4 A B 8 6.408 -19.480 8.748 1.00 56.71 C
TER

Atoms:
C4: (8.382,-15.065,12.310)
N3: (7.214,-15.339,11.624)
OP1: (6.411,-10.895,18.640)
OP2: (8.276,-12.089,17.354)
C2: (5.980,-14.768,11.832)
C1': (4.629,-13.176,13.153)
C3': (3.986,-13.853,15.320)
O5': (5.945,-12.152,16.533)
O4': (4.815,-12.096,14.047)
C5': (4.654,-11.664,16.408)
P: (7.015,-11.311,17.350)
C4': (4.018,-12.344,15.231)
C2': (3.704,-14.163,13.862)
O2': (2.368,-13.917,13.505)
N1: (5.940,-13.823,12.839)
O4: (9.412,-15.658,12.004)
O2: (5.003,-15.086,11.169)
C6: (7.066,-13.507,13.573)
C5: (8.256,-14.072,13.351)
O3': (2.947,-14.272,16.159)
OP1: (-0.669,-15.473,10.772)
OP2: (1.792,-15.458,11.420)
C3': (2.354,-20.068,9.647)
C1': (3.949,-19.214,8.094)
C5': (1.122,-17.902,9.910)
O4': (2.970,-18.216,8.350)
C8: (5.430,-17.616,9.387)
O2': (2.854,-21.333,7.612)
C6: (8.579,-19.154,9.626)
C5: (7.272,-18.671,9.450)
C4: (6.408,-19.480,8.748)
P: (0.758,-15.404,10.374)
C4': (1.801,-18.841,8.950)
C2': (3.406,-20.545,8.646)
C2: (7.946,-21.050,8.449)
N1: (8.888,-20.367,9.103)
N3: (6.686,-20.688,8.220)
N6: (9.522,-18.464,10.281)
N7: (6.652,-17.495,9.841)
N9: (5.209,-18.787,8.712)
O5': (1.076,-16.602,9.382)
O3': (1.294,-21.004,9.885)
Image (generated by PyMOL):
PyMOL image
show in jmol