Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A152:A86
Extra
PDB:
ATOM 1 O3' U A 151 -11.841 29.251 4.564 1.00 29.72 O
ATOM 2 P U A 152 -11.135 28.110 3.686 1.00 31.25 P
ATOM 3 OP1 U A 152 -11.400 28.500 2.272 1.00 31.10 O
ATOM 4 OP2 U A 152 -11.601 26.824 4.239 1.00 28.04 O
ATOM 5 O5' U A 152 -9.603 28.271 4.008 1.00 32.68 O
ATOM 6 C5' U A 152 -8.873 29.337 3.431 1.00 31.66 C
ATOM 7 C4' U A 152 -7.431 29.214 3.816 1.00 33.10 C
ATOM 8 O4' U A 152 -7.259 29.548 5.217 1.00 30.64 O
ATOM 9 C3' U A 152 -6.872 27.810 3.702 1.00 32.85 C
ATOM 10 O3' U A 152 -6.491 27.501 2.376 1.00 37.44 O
ATOM 11 C2' U A 152 -5.696 27.849 4.665 1.00 33.27 C
ATOM 12 O2' U A 152 -4.605 28.527 4.063 1.00 34.66 O
ATOM 13 C1' U A 152 -6.255 28.732 5.779 1.00 30.68 C
ATOM 14 N1 U A 152 -6.834 27.945 6.885 1.00 29.64 N
ATOM 15 C2 U A 152 -5.947 27.415 7.812 1.00 29.93 C
ATOM 16 O2 U A 152 -4.743 27.568 7.732 1.00 29.13 O
ATOM 17 N3 U A 152 -6.518 26.695 8.827 1.00 25.91 N
ATOM 18 C4 U A 152 -7.862 26.462 9.019 1.00 28.36 C
ATOM 19 O4 U A 152 -8.225 25.791 9.997 1.00 28.50 O
ATOM 20 C5 U A 152 -8.713 27.038 8.022 1.00 27.90 C
ATOM 21 C6 U A 152 -8.196 27.748 7.011 1.00 27.94 C
ATOM 22 P G A 153 -7.119 26.220 1.649 1.00 36.59 P
ATOM 23 OP1 G A 153 -6.580 26.290 0.268 1.00 42.99 O
ATOM 24 OP2 G A 153 -8.568 26.172 1.943 1.00 38.87 O
ATOM 25 O5' G A 153 -6.338 25.085 2.430 1.00 42.65 O
TER
ATOM 1 O3' G B 85 0.734 31.518 13.134 1.00 16.48 O
ATOM 2 P A B 86 -0.178 30.609 12.133 1.00 18.54 P
ATOM 3 OP1 A B 86 -0.560 31.436 10.956 1.00 22.70 O
ATOM 4 OP2 A B 86 -1.260 30.078 13.006 1.00 18.16 O
ATOM 5 O5' A B 86 0.763 29.440 11.631 1.00 20.36 O
ATOM 6 C5' A B 86 1.330 28.527 12.560 1.00 19.74 C
ATOM 7 C4' A B 86 0.911 27.089 12.323 1.00 20.00 C
ATOM 8 O4' A B 86 -0.508 26.908 12.609 1.00 23.62 O
ATOM 9 C3' A B 86 1.129 26.488 10.931 1.00 20.75 C
ATOM 10 O3' A B 86 1.720 25.210 11.099 1.00 23.00 O
ATOM 11 C2' A B 86 -0.288 26.253 10.406 1.00 26.01 C
ATOM 12 O2' A B 86 -0.417 25.150 9.535 1.00 31.96 O
ATOM 13 C1' A B 86 -1.006 25.940 11.704 1.00 25.36 C
ATOM 14 N9 A B 86 -2.480 25.892 11.647 1.00 21.07 N
ATOM 15 C8 A B 86 -3.318 26.179 10.588 1.00 24.62 C
ATOM 16 N7 A B 86 -4.596 26.010 10.862 1.00 24.45 N
ATOM 17 C5 A B 86 -4.591 25.552 12.176 1.00 24.23 C
ATOM 18 C6 A B 86 -5.626 25.189 13.047 1.00 26.00 C
ATOM 19 N6 A B 86 -6.920 25.219 12.696 1.00 25.81 N
ATOM 20 N1 A B 86 -5.285 24.788 14.292 1.00 24.12 N
ATOM 21 C2 A B 86 -3.986 24.758 14.624 1.00 24.11 C
ATOM 22 N3 A B 86 -2.916 25.077 13.888 1.00 24.51 N
ATOM 23 C4 A B 86 -3.293 25.469 12.662 1.00 23.58 C
ATOM 24 P C B 87 3.317 25.079 11.180 1.00 24.07 P
ATOM 25 OP1 C B 87 3.629 24.340 12.423 1.00 24.20 O
ATOM 26 OP2 C B 87 3.806 26.446 10.991 1.00 21.18 O
ATOM 27 O5' C B 87 3.654 24.236 9.876 1.00 24.26 O
TER
ATOM 2 P U A 152 -11.135 28.110 3.686 1.00 31.25 P
ATOM 3 OP1 U A 152 -11.400 28.500 2.272 1.00 31.10 O
ATOM 4 OP2 U A 152 -11.601 26.824 4.239 1.00 28.04 O
ATOM 5 O5' U A 152 -9.603 28.271 4.008 1.00 32.68 O
ATOM 6 C5' U A 152 -8.873 29.337 3.431 1.00 31.66 C
ATOM 7 C4' U A 152 -7.431 29.214 3.816 1.00 33.10 C
ATOM 8 O4' U A 152 -7.259 29.548 5.217 1.00 30.64 O
ATOM 9 C3' U A 152 -6.872 27.810 3.702 1.00 32.85 C
ATOM 10 O3' U A 152 -6.491 27.501 2.376 1.00 37.44 O
ATOM 11 C2' U A 152 -5.696 27.849 4.665 1.00 33.27 C
ATOM 12 O2' U A 152 -4.605 28.527 4.063 1.00 34.66 O
ATOM 13 C1' U A 152 -6.255 28.732 5.779 1.00 30.68 C
ATOM 14 N1 U A 152 -6.834 27.945 6.885 1.00 29.64 N
ATOM 15 C2 U A 152 -5.947 27.415 7.812 1.00 29.93 C
ATOM 16 O2 U A 152 -4.743 27.568 7.732 1.00 29.13 O
ATOM 17 N3 U A 152 -6.518 26.695 8.827 1.00 25.91 N
ATOM 18 C4 U A 152 -7.862 26.462 9.019 1.00 28.36 C
ATOM 19 O4 U A 152 -8.225 25.791 9.997 1.00 28.50 O
ATOM 20 C5 U A 152 -8.713 27.038 8.022 1.00 27.90 C
ATOM 21 C6 U A 152 -8.196 27.748 7.011 1.00 27.94 C
ATOM 22 P G A 153 -7.119 26.220 1.649 1.00 36.59 P
ATOM 23 OP1 G A 153 -6.580 26.290 0.268 1.00 42.99 O
ATOM 24 OP2 G A 153 -8.568 26.172 1.943 1.00 38.87 O
ATOM 25 O5' G A 153 -6.338 25.085 2.430 1.00 42.65 O
TER
ATOM 1 O3' G B 85 0.734 31.518 13.134 1.00 16.48 O
ATOM 2 P A B 86 -0.178 30.609 12.133 1.00 18.54 P
ATOM 3 OP1 A B 86 -0.560 31.436 10.956 1.00 22.70 O
ATOM 4 OP2 A B 86 -1.260 30.078 13.006 1.00 18.16 O
ATOM 5 O5' A B 86 0.763 29.440 11.631 1.00 20.36 O
ATOM 6 C5' A B 86 1.330 28.527 12.560 1.00 19.74 C
ATOM 7 C4' A B 86 0.911 27.089 12.323 1.00 20.00 C
ATOM 8 O4' A B 86 -0.508 26.908 12.609 1.00 23.62 O
ATOM 9 C3' A B 86 1.129 26.488 10.931 1.00 20.75 C
ATOM 10 O3' A B 86 1.720 25.210 11.099 1.00 23.00 O
ATOM 11 C2' A B 86 -0.288 26.253 10.406 1.00 26.01 C
ATOM 12 O2' A B 86 -0.417 25.150 9.535 1.00 31.96 O
ATOM 13 C1' A B 86 -1.006 25.940 11.704 1.00 25.36 C
ATOM 14 N9 A B 86 -2.480 25.892 11.647 1.00 21.07 N
ATOM 15 C8 A B 86 -3.318 26.179 10.588 1.00 24.62 C
ATOM 16 N7 A B 86 -4.596 26.010 10.862 1.00 24.45 N
ATOM 17 C5 A B 86 -4.591 25.552 12.176 1.00 24.23 C
ATOM 18 C6 A B 86 -5.626 25.189 13.047 1.00 26.00 C
ATOM 19 N6 A B 86 -6.920 25.219 12.696 1.00 25.81 N
ATOM 20 N1 A B 86 -5.285 24.788 14.292 1.00 24.12 N
ATOM 21 C2 A B 86 -3.986 24.758 14.624 1.00 24.11 C
ATOM 22 N3 A B 86 -2.916 25.077 13.888 1.00 24.51 N
ATOM 23 C4 A B 86 -3.293 25.469 12.662 1.00 23.58 C
ATOM 24 P C B 87 3.317 25.079 11.180 1.00 24.07 P
ATOM 25 OP1 C B 87 3.629 24.340 12.423 1.00 24.20 O
ATOM 26 OP2 C B 87 3.806 26.446 10.991 1.00 21.18 O
ATOM 27 O5' C B 87 3.654 24.236 9.876 1.00 24.26 O
TER
Atoms:
C4: (-7.862,26.462,9.019)
N3: (-6.518,26.695,8.827)
OP1: (-11.400,28.500,2.272)
OP2: (-11.601,26.824,4.239)
C2: (-5.947,27.415,7.812)
C1': (-6.255,28.732,5.779)
C3': (-6.872,27.810,3.702)
O5': (-9.603,28.271,4.008)
O4': (-7.259,29.548,5.217)
C5': (-8.873,29.337,3.431)
P: (-11.135,28.110,3.686)
C4': (-7.431,29.214,3.816)
C2': (-5.696,27.849,4.665)
O2': (-4.605,28.527,4.063)
N1: (-6.834,27.945,6.885)
O4: (-8.225,25.791,9.997)
O2: (-4.743,27.568,7.732)
C6: (-8.196,27.748,7.011)
C5: (-8.713,27.038,8.022)
O3': (-6.491,27.501,2.376)
N3: (-6.518,26.695,8.827)
OP1: (-11.400,28.500,2.272)
OP2: (-11.601,26.824,4.239)
C2: (-5.947,27.415,7.812)
C1': (-6.255,28.732,5.779)
C3': (-6.872,27.810,3.702)
O5': (-9.603,28.271,4.008)
O4': (-7.259,29.548,5.217)
C5': (-8.873,29.337,3.431)
P: (-11.135,28.110,3.686)
C4': (-7.431,29.214,3.816)
C2': (-5.696,27.849,4.665)
O2': (-4.605,28.527,4.063)
N1: (-6.834,27.945,6.885)
O4: (-8.225,25.791,9.997)
O2: (-4.743,27.568,7.732)
C6: (-8.196,27.748,7.011)
C5: (-8.713,27.038,8.022)
O3': (-6.491,27.501,2.376)
OP1: (-0.560,31.436,10.956)
OP2: (-1.260,30.078,13.006)
C3': (1.129,26.488,10.931)
C1': (-1.006,25.940,11.704)
C5': (1.330,28.527,12.560)
O4': (-0.508,26.908,12.609)
C8: (-3.318,26.179,10.588)
O2': (-0.417,25.150,9.535)
C6: (-5.626,25.189,13.047)
C5: (-4.591,25.552,12.176)
C4: (-3.293,25.469,12.662)
P: (-0.178,30.609,12.133)
C4': (0.911,27.089,12.323)
C2': (-0.288,26.253,10.406)
C2: (-3.986,24.758,14.624)
N1: (-5.285,24.788,14.292)
N3: (-2.916,25.077,13.888)
N6: (-6.920,25.219,12.696)
N7: (-4.596,26.010,10.862)
N9: (-2.480,25.892,11.647)
O5': (0.763,29.440,11.631)
O3': (1.720,25.210,11.099)
OP2: (-1.260,30.078,13.006)
C3': (1.129,26.488,10.931)
C1': (-1.006,25.940,11.704)
C5': (1.330,28.527,12.560)
O4': (-0.508,26.908,12.609)
C8: (-3.318,26.179,10.588)
O2': (-0.417,25.150,9.535)
C6: (-5.626,25.189,13.047)
C5: (-4.591,25.552,12.176)
C4: (-3.293,25.469,12.662)
P: (-0.178,30.609,12.133)
C4': (0.911,27.089,12.323)
C2': (-0.288,26.253,10.406)
C2: (-3.986,24.758,14.624)
N1: (-5.285,24.788,14.292)
N3: (-2.916,25.077,13.888)
N6: (-6.920,25.219,12.696)
N7: (-4.596,26.010,10.862)
N9: (-2.480,25.892,11.647)
O5': (0.763,29.440,11.631)
O3': (1.720,25.210,11.099)
Image (generated by PyMOL):