Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:053:060
Extra
PDB:
ATOM 1 O3' C A 52 51.815 149.636 43.958 1.00 54.09 O
ATOM 2 P U A 53 52.743 149.496 42.652 1.00 57.11 P
ATOM 3 OP1 U A 53 53.100 148.060 42.531 1.00 57.67 O
ATOM 4 OP2 U A 53 53.822 150.513 42.688 1.00 57.69 O
ATOM 5 O5' U A 53 51.766 149.873 41.453 1.00 56.24 O
ATOM 6 C5' U A 53 50.716 148.979 41.049 1.00 53.98 C
ATOM 7 C4' U A 53 49.946 149.568 39.894 1.00 53.00 C
ATOM 8 O4' U A 53 49.300 150.794 40.323 1.00 52.68 O
ATOM 9 C3' U A 53 50.782 150.001 38.705 1.00 52.21 C
ATOM 10 O3' U A 53 51.100 148.922 37.851 1.00 51.98 O
ATOM 11 C2' U A 53 49.877 151.013 38.032 1.00 52.62 C
ATOM 12 O2' U A 53 48.847 150.375 37.312 1.00 54.00 O
ATOM 13 C1' U A 53 49.282 151.721 39.250 1.00 53.40 C
ATOM 14 N1 U A 53 50.037 152.919 39.655 1.00 53.81 N
ATOM 15 C2 U A 53 49.667 154.129 39.099 1.00 53.24 C
ATOM 16 O2 U A 53 48.753 154.238 38.299 1.00 53.15 O
ATOM 17 N3 U A 53 50.410 155.210 39.513 1.00 52.26 N
ATOM 18 C4 U A 53 51.461 155.204 40.403 1.00 52.18 C
ATOM 19 O4 U A 53 52.018 156.263 40.687 1.00 51.71 O
ATOM 20 C5 U A 53 51.785 153.919 40.937 1.00 53.35 C
ATOM 21 C6 U A 53 51.081 152.847 40.557 1.00 54.44 C
ATOM 22 P G A 54 52.483 148.950 37.041 1.00 54.25 P
ATOM 23 OP1 G A 54 52.626 147.654 36.343 1.00 54.62 O
ATOM 24 OP2 G A 54 53.546 149.398 37.979 1.00 53.66 O
ATOM 25 O5' G A 54 52.250 150.076 35.937 1.00 53.12 O
TER
ATOM 1 O3' A B 59 53.594 161.310 31.251 1.00 49.76 O
ATOM 2 P A B 60 52.561 161.512 32.486 1.00 48.00 P
ATOM 3 OP1 A B 60 51.852 162.803 32.328 1.00 48.64 O
ATOM 4 OP2 A B 60 53.243 161.218 33.755 1.00 48.54 O
ATOM 5 O5' A B 60 51.494 160.349 32.278 1.00 49.83 O
ATOM 6 C5' A B 60 50.093 160.577 32.507 1.00 52.25 C
ATOM 7 C4' A B 60 49.332 159.273 32.457 1.00 54.08 C
ATOM 8 O4' A B 60 49.860 158.365 33.456 1.00 53.75 O
ATOM 9 C3' A B 60 47.847 159.397 32.756 1.00 57.22 C
ATOM 10 O3' A B 60 47.140 158.388 32.061 1.00 60.87 O
ATOM 11 C2' A B 60 47.780 159.125 34.249 1.00 57.20 C
ATOM 12 O2' A B 60 46.516 158.623 34.637 1.00 60.57 O
ATOM 13 C1' A B 60 48.863 158.064 34.410 1.00 55.25 C
ATOM 14 N9 A B 60 49.499 158.082 35.723 1.00 55.61 N
ATOM 15 C8 A B 60 49.594 157.051 36.617 1.00 56.98 C
ATOM 16 N7 A B 60 50.278 157.347 37.695 1.00 58.44 N
ATOM 17 C5 A B 60 50.649 158.670 37.503 1.00 58.17 C
ATOM 18 C6 A B 60 51.399 159.567 38.284 1.00 57.81 C
ATOM 19 N6 A B 60 51.948 159.250 39.460 1.00 57.81 N
ATOM 20 N1 A B 60 51.572 160.819 37.808 1.00 57.22 N
ATOM 21 C2 A B 60 51.031 161.134 36.629 1.00 57.00 C
ATOM 22 N3 A B 60 50.313 160.380 35.802 1.00 57.67 N
ATOM 23 C4 A B 60 50.159 159.142 36.302 1.00 57.35 C
ATOM 24 P G B 61 46.650 158.659 30.560 1.00 64.19 P
ATOM 25 OP1 G B 61 46.149 160.065 30.472 1.00 63.24 O
ATOM 26 OP2 G B 61 45.758 157.527 30.173 1.00 64.36 O
ATOM 27 O5' G B 61 47.999 158.556 29.724 1.00 60.75 O
TER
ATOM 2 P U A 53 52.743 149.496 42.652 1.00 57.11 P
ATOM 3 OP1 U A 53 53.100 148.060 42.531 1.00 57.67 O
ATOM 4 OP2 U A 53 53.822 150.513 42.688 1.00 57.69 O
ATOM 5 O5' U A 53 51.766 149.873 41.453 1.00 56.24 O
ATOM 6 C5' U A 53 50.716 148.979 41.049 1.00 53.98 C
ATOM 7 C4' U A 53 49.946 149.568 39.894 1.00 53.00 C
ATOM 8 O4' U A 53 49.300 150.794 40.323 1.00 52.68 O
ATOM 9 C3' U A 53 50.782 150.001 38.705 1.00 52.21 C
ATOM 10 O3' U A 53 51.100 148.922 37.851 1.00 51.98 O
ATOM 11 C2' U A 53 49.877 151.013 38.032 1.00 52.62 C
ATOM 12 O2' U A 53 48.847 150.375 37.312 1.00 54.00 O
ATOM 13 C1' U A 53 49.282 151.721 39.250 1.00 53.40 C
ATOM 14 N1 U A 53 50.037 152.919 39.655 1.00 53.81 N
ATOM 15 C2 U A 53 49.667 154.129 39.099 1.00 53.24 C
ATOM 16 O2 U A 53 48.753 154.238 38.299 1.00 53.15 O
ATOM 17 N3 U A 53 50.410 155.210 39.513 1.00 52.26 N
ATOM 18 C4 U A 53 51.461 155.204 40.403 1.00 52.18 C
ATOM 19 O4 U A 53 52.018 156.263 40.687 1.00 51.71 O
ATOM 20 C5 U A 53 51.785 153.919 40.937 1.00 53.35 C
ATOM 21 C6 U A 53 51.081 152.847 40.557 1.00 54.44 C
ATOM 22 P G A 54 52.483 148.950 37.041 1.00 54.25 P
ATOM 23 OP1 G A 54 52.626 147.654 36.343 1.00 54.62 O
ATOM 24 OP2 G A 54 53.546 149.398 37.979 1.00 53.66 O
ATOM 25 O5' G A 54 52.250 150.076 35.937 1.00 53.12 O
TER
ATOM 1 O3' A B 59 53.594 161.310 31.251 1.00 49.76 O
ATOM 2 P A B 60 52.561 161.512 32.486 1.00 48.00 P
ATOM 3 OP1 A B 60 51.852 162.803 32.328 1.00 48.64 O
ATOM 4 OP2 A B 60 53.243 161.218 33.755 1.00 48.54 O
ATOM 5 O5' A B 60 51.494 160.349 32.278 1.00 49.83 O
ATOM 6 C5' A B 60 50.093 160.577 32.507 1.00 52.25 C
ATOM 7 C4' A B 60 49.332 159.273 32.457 1.00 54.08 C
ATOM 8 O4' A B 60 49.860 158.365 33.456 1.00 53.75 O
ATOM 9 C3' A B 60 47.847 159.397 32.756 1.00 57.22 C
ATOM 10 O3' A B 60 47.140 158.388 32.061 1.00 60.87 O
ATOM 11 C2' A B 60 47.780 159.125 34.249 1.00 57.20 C
ATOM 12 O2' A B 60 46.516 158.623 34.637 1.00 60.57 O
ATOM 13 C1' A B 60 48.863 158.064 34.410 1.00 55.25 C
ATOM 14 N9 A B 60 49.499 158.082 35.723 1.00 55.61 N
ATOM 15 C8 A B 60 49.594 157.051 36.617 1.00 56.98 C
ATOM 16 N7 A B 60 50.278 157.347 37.695 1.00 58.44 N
ATOM 17 C5 A B 60 50.649 158.670 37.503 1.00 58.17 C
ATOM 18 C6 A B 60 51.399 159.567 38.284 1.00 57.81 C
ATOM 19 N6 A B 60 51.948 159.250 39.460 1.00 57.81 N
ATOM 20 N1 A B 60 51.572 160.819 37.808 1.00 57.22 N
ATOM 21 C2 A B 60 51.031 161.134 36.629 1.00 57.00 C
ATOM 22 N3 A B 60 50.313 160.380 35.802 1.00 57.67 N
ATOM 23 C4 A B 60 50.159 159.142 36.302 1.00 57.35 C
ATOM 24 P G B 61 46.650 158.659 30.560 1.00 64.19 P
ATOM 25 OP1 G B 61 46.149 160.065 30.472 1.00 63.24 O
ATOM 26 OP2 G B 61 45.758 157.527 30.173 1.00 64.36 O
ATOM 27 O5' G B 61 47.999 158.556 29.724 1.00 60.75 O
TER
Atoms:
C4: (51.461,155.204,40.403)
N3: (50.410,155.210,39.513)
OP1: (53.100,148.060,42.531)
OP2: (53.822,150.513,42.688)
C2: (49.667,154.129,39.099)
C1': (49.282,151.721,39.250)
C3': (50.782,150.001,38.705)
O5': (51.766,149.873,41.453)
O4': (49.300,150.794,40.323)
C5': (50.716,148.979,41.049)
P: (52.743,149.496,42.652)
C4': (49.946,149.568,39.894)
C2': (49.877,151.013,38.032)
O2': (48.847,150.375,37.312)
N1: (50.037,152.919,39.655)
O4: (52.018,156.263,40.687)
O2: (48.753,154.238,38.299)
C6: (51.081,152.847,40.557)
C5: (51.785,153.919,40.937)
O3': (51.100,148.922,37.851)
N3: (50.410,155.210,39.513)
OP1: (53.100,148.060,42.531)
OP2: (53.822,150.513,42.688)
C2: (49.667,154.129,39.099)
C1': (49.282,151.721,39.250)
C3': (50.782,150.001,38.705)
O5': (51.766,149.873,41.453)
O4': (49.300,150.794,40.323)
C5': (50.716,148.979,41.049)
P: (52.743,149.496,42.652)
C4': (49.946,149.568,39.894)
C2': (49.877,151.013,38.032)
O2': (48.847,150.375,37.312)
N1: (50.037,152.919,39.655)
O4: (52.018,156.263,40.687)
O2: (48.753,154.238,38.299)
C6: (51.081,152.847,40.557)
C5: (51.785,153.919,40.937)
O3': (51.100,148.922,37.851)
OP1: (51.852,162.803,32.328)
OP2: (53.243,161.218,33.755)
C3': (47.847,159.397,32.756)
C1': (48.863,158.064,34.410)
C5': (50.093,160.577,32.507)
O4': (49.860,158.365,33.456)
C8: (49.594,157.051,36.617)
O2': (46.516,158.623,34.637)
C6: (51.399,159.567,38.284)
C5: (50.649,158.670,37.503)
C4: (50.159,159.142,36.302)
P: (52.561,161.512,32.486)
C4': (49.332,159.273,32.457)
C2': (47.780,159.125,34.249)
C2: (51.031,161.134,36.629)
N1: (51.572,160.819,37.808)
N3: (50.313,160.380,35.802)
N6: (51.948,159.250,39.460)
N7: (50.278,157.347,37.695)
N9: (49.499,158.082,35.723)
O5': (51.494,160.349,32.278)
O3': (47.140,158.388,32.061)
OP2: (53.243,161.218,33.755)
C3': (47.847,159.397,32.756)
C1': (48.863,158.064,34.410)
C5': (50.093,160.577,32.507)
O4': (49.860,158.365,33.456)
C8: (49.594,157.051,36.617)
O2': (46.516,158.623,34.637)
C6: (51.399,159.567,38.284)
C5: (50.649,158.670,37.503)
C4: (50.159,159.142,36.302)
P: (52.561,161.512,32.486)
C4': (49.332,159.273,32.457)
C2': (47.780,159.125,34.249)
C2: (51.031,161.134,36.629)
N1: (51.572,160.819,37.808)
N3: (50.313,160.380,35.802)
N6: (51.948,159.250,39.460)
N7: (50.278,157.347,37.695)
N9: (49.499,158.082,35.723)
O5': (51.494,160.349,32.278)
O3': (47.140,158.388,32.061)
Image (generated by PyMOL):