ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A403:A497

Extra

PDB:
ATOM 1 O3' G A 402 -49.383 29.012 79.892 1.00 22.89 O
ATOM 2 P U A 403 -50.567 29.680 79.027 1.00 16.59 P
ATOM 3 OP1 U A 403 -51.338 28.572 78.415 1.00 16.59 O
ATOM 4 OP2 U A 403 -49.938 30.695 78.132 1.00 16.59 O
ATOM 5 O5' U A 403 -51.460 30.388 80.124 1.00 16.59 O
ATOM 6 C5' U A 403 -52.116 29.619 81.093 1.00 16.59 C
ATOM 7 C4' U A 403 -52.832 30.484 82.071 1.00 16.59 C
ATOM 8 O4' U A 403 -51.887 31.322 82.784 1.00 16.59 O
ATOM 9 C3' U A 403 -53.799 31.467 81.471 1.00 16.59 C
ATOM 10 O3' U A 403 -55.015 30.878 81.099 1.00 16.59 O
ATOM 11 C2' U A 403 -53.947 32.483 82.579 1.00 16.59 C
ATOM 12 O2' U A 403 -54.808 31.987 83.592 1.00 16.59 O
ATOM 13 C1' U A 403 -52.513 32.545 83.123 1.00 16.59 C
ATOM 14 N1 U A 403 -51.743 33.669 82.521 1.00 16.35 N
ATOM 15 C2 U A 403 -51.532 34.860 83.194 1.00 16.35 C
ATOM 16 O2 U A 403 -51.922 35.083 84.322 1.00 16.35 O
ATOM 17 N3 U A 403 -50.819 35.811 82.517 1.00 16.35 N
ATOM 18 C4 U A 403 -50.308 35.740 81.245 1.00 16.35 C
ATOM 19 O4 U A 403 -49.692 36.677 80.725 1.00 16.35 O
ATOM 20 C5 U A 403 -50.580 34.496 80.622 1.00 16.35 C
ATOM 21 C6 U A 403 -51.263 33.536 81.259 1.00 16.35 C
ATOM 22 P G A 404 -56.100 31.767 80.346 1.00 18.09 P
ATOM 23 OP1 G A 404 -56.390 32.912 81.239 1.00 18.09 O
ATOM 24 OP2 G A 404 -57.230 30.877 79.937 1.00 18.09 O
ATOM 25 O5' G A 404 -55.291 32.241 79.053 1.00 18.09 O
TER

ATOM 1 O3' A B 496 -56.170 34.932 87.103 1.00 25.32 O
ATOM 2 P A B 497 -56.535 35.569 85.682 1.00 20.94 P
ATOM 3 OP1 A B 497 -58.029 35.607 85.600 1.00 20.94 O
ATOM 4 OP2 A B 497 -55.770 34.809 84.660 1.00 20.94 O
ATOM 5 O5' A B 497 -55.948 37.065 85.786 1.00 20.94 O
ATOM 6 C5' A B 497 -56.660 38.098 86.480 1.00 20.94 C
ATOM 7 C4' A B 497 -56.193 39.487 86.090 1.00 20.94 C
ATOM 8 O4' A B 497 -54.738 39.549 86.143 1.00 20.94 O
ATOM 9 C3' A B 497 -56.581 39.937 84.681 1.00 20.94 C
ATOM 10 O3' A B 497 -56.791 41.352 84.656 1.00 20.94 O
ATOM 11 C2' A B 497 -55.315 39.643 83.897 1.00 20.94 C
ATOM 12 O2' A B 497 -55.188 40.372 82.694 1.00 20.94 O
ATOM 13 C1' A B 497 -54.264 40.054 84.914 1.00 20.94 C
ATOM 14 N9 A B 497 -52.923 39.525 84.650 1.00 20.61 N
ATOM 15 C8 A B 497 -52.523 38.253 84.314 1.00 20.61 C
ATOM 16 N7 A B 497 -51.224 38.128 84.129 1.00 20.61 N
ATOM 17 C5 A B 497 -50.719 39.405 84.330 1.00 20.61 C
ATOM 18 C6 A B 497 -49.406 39.943 84.278 1.00 20.61 C
ATOM 19 N6 A B 497 -48.296 39.271 83.987 1.00 20.61 N
ATOM 20 N1 A B 497 -49.281 41.252 84.553 1.00 20.61 N
ATOM 21 C2 A B 497 -50.390 41.955 84.845 1.00 20.61 C
ATOM 22 N3 A B 497 -51.669 41.575 84.927 1.00 20.61 N
ATOM 23 C4 A B 497 -51.769 40.271 84.652 1.00 20.61 C
ATOM 24 P G B 498 -57.926 42.060 85.546 1.00 16.37 P
ATOM 25 OP1 G B 498 -58.285 41.114 86.640 1.00 16.37 O
ATOM 26 OP2 G B 498 -58.996 42.529 84.617 1.00 16.37 O
ATOM 27 O5' G B 498 -57.149 43.310 86.148 1.00 16.37 O
TER

Atoms:
C4: (-50.308,35.740,81.245)
N3: (-50.819,35.811,82.517)
OP1: (-51.338,28.572,78.415)
OP2: (-49.938,30.695,78.132)
C2: (-51.532,34.860,83.194)
C1': (-52.513,32.545,83.123)
C3': (-53.799,31.467,81.471)
O5': (-51.460,30.388,80.124)
O4': (-51.887,31.322,82.784)
C5': (-52.116,29.619,81.093)
P: (-50.567,29.680,79.027)
C4': (-52.832,30.484,82.071)
C2': (-53.947,32.483,82.579)
O2': (-54.808,31.987,83.592)
N1: (-51.743,33.669,82.521)
O4: (-49.692,36.677,80.725)
O2: (-51.922,35.083,84.322)
C6: (-51.263,33.536,81.259)
C5: (-50.580,34.496,80.622)
O3': (-55.015,30.878,81.099)
OP1: (-58.029,35.607,85.600)
OP2: (-55.770,34.809,84.660)
C3': (-56.581,39.937,84.681)
C1': (-54.264,40.054,84.914)
C5': (-56.660,38.098,86.480)
O4': (-54.738,39.549,86.143)
C8: (-52.523,38.253,84.314)
O2': (-55.188,40.372,82.694)
C6: (-49.406,39.943,84.278)
C5: (-50.719,39.405,84.330)
C4: (-51.769,40.271,84.652)
P: (-56.535,35.569,85.682)
C4': (-56.193,39.487,86.090)
C2': (-55.315,39.643,83.897)
C2: (-50.390,41.955,84.845)
N1: (-49.281,41.252,84.553)
N3: (-51.669,41.575,84.927)
N6: (-48.296,39.271,83.987)
N7: (-51.224,38.128,84.129)
N9: (-52.923,39.525,84.650)
O5': (-55.948,37.065,85.786)
O3': (-56.791,41.352,84.656)
Image (generated by PyMOL):
PyMOL image
show in jmol