Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52004:52124
Extra
PDB:
ATOM 1 O3' C A2003 203.678 -0.177 220.670 1.00 49.24 O
ATOM 2 P U A2004 203.729 -1.539 219.858 1.00 51.63 P
ATOM 3 OP1 U A2004 204.559 -2.467 220.644 1.00 51.73 O
ATOM 4 OP2 U A2004 204.125 -1.184 218.482 1.00 51.98 O
ATOM 5 O5' U A2004 202.220 -2.033 219.881 1.00 51.30 O
ATOM 6 C5' U A2004 201.604 -2.393 221.101 1.00 50.95 C
ATOM 7 C4' U A2004 200.126 -2.462 220.954 1.00 50.65 C
ATOM 8 O4' U A2004 199.662 -1.290 220.258 1.00 50.60 O
ATOM 9 C3' U A2004 199.588 -3.633 220.133 1.00 50.79 C
ATOM 10 O3' U A2004 199.456 -4.809 220.923 1.00 50.70 O
ATOM 11 C2' U A2004 198.250 -3.109 219.609 1.00 50.56 C
ATOM 12 O2' U A2004 197.219 -3.344 220.559 1.00 50.17 O
ATOM 13 C1' U A2004 198.481 -1.598 219.540 1.00 50.52 C
ATOM 14 N1 U A2004 198.591 -1.078 218.144 1.00 50.79 N
ATOM 15 C2 U A2004 197.451 -1.013 217.415 1.00 50.70 C
ATOM 16 O2 U A2004 196.429 -1.398 217.881 1.00 50.42 O
ATOM 17 N3 U A2004 197.526 -0.509 216.162 1.00 50.96 N
ATOM 18 C4 U A2004 198.643 -0.034 215.522 1.00 51.31 C
ATOM 19 O4 U A2004 198.596 0.409 214.360 1.00 51.53 O
ATOM 20 C5 U A2004 199.817 -0.115 216.332 1.00 51.39 C
ATOM 21 C6 U A2004 199.762 -0.608 217.576 1.00 51.14 C
ATOM 22 P G A2005 199.971 -6.224 220.389 1.00 52.94 P
ATOM 23 OP1 G A2005 200.873 -5.947 219.250 1.00 53.35 O
ATOM 24 OP2 G A2005 198.784 -7.058 220.157 1.00 52.81 O
ATOM 25 O5' G A2005 200.779 -6.802 221.632 1.00 52.93 O
TER
ATOM 1 O3' A B2123 192.874 -2.979 221.475 1.00 44.72 O
ATOM 2 P A B2124 193.222 -3.864 220.191 1.00 46.93 P
ATOM 3 OP1 A B2124 192.657 -5.194 220.419 1.00 46.89 O
ATOM 4 OP2 A B2124 194.649 -3.735 219.917 1.00 47.25 O
ATOM 5 O5' A B2124 192.411 -3.124 219.059 1.00 46.95 O
ATOM 6 C5' A B2124 191.854 -3.833 217.968 1.00 47.13 C
ATOM 7 C4' A B2124 190.944 -2.952 217.187 1.00 47.06 C
ATOM 8 O4' A B2124 191.616 -1.715 216.914 1.00 47.15 O
ATOM 9 C3' A B2124 190.466 -3.516 215.866 1.00 47.31 C
ATOM 10 O3' A B2124 189.041 -3.415 215.786 1.00 47.07 O
ATOM 11 C2' A B2124 191.122 -2.634 214.804 1.00 47.59 C
ATOM 12 O2' A B2124 190.283 -2.350 213.711 1.00 47.67 O
ATOM 13 C1' A B2124 191.459 -1.362 215.563 1.00 47.39 C
ATOM 14 N9 A B2124 192.701 -0.711 215.110 1.00 47.68 N
ATOM 15 C8 A B2124 193.937 -0.959 215.580 1.00 47.83 C
ATOM 16 N7 A B2124 194.850 -0.240 215.023 1.00 48.08 N
ATOM 17 C5 A B2124 194.187 0.568 214.140 1.00 48.11 C
ATOM 18 C6 A B2124 194.629 1.552 213.243 1.00 48.35 C
ATOM 19 N6 A B2124 195.889 1.928 213.088 1.00 48.62 N
ATOM 20 N1 A B2124 193.697 2.173 212.495 1.00 48.31 N
ATOM 21 C2 A B2124 192.409 1.824 212.655 1.00 48.04 C
ATOM 22 N3 A B2124 191.898 0.915 213.464 1.00 47.81 N
ATOM 23 C4 A B2124 192.851 0.304 214.186 1.00 47.86 C
ATOM 24 P U B2125 188.136 -4.636 216.267 1.00 51.39 P
ATOM 25 OP1 U B2125 188.521 -5.798 215.503 1.00 51.73 O
ATOM 26 OP2 U B2125 186.770 -4.205 216.216 1.00 51.14 O
ATOM 27 O5' U B2125 188.588 -4.858 217.745 1.00 51.17 O
TER
ATOM 2 P U A2004 203.729 -1.539 219.858 1.00 51.63 P
ATOM 3 OP1 U A2004 204.559 -2.467 220.644 1.00 51.73 O
ATOM 4 OP2 U A2004 204.125 -1.184 218.482 1.00 51.98 O
ATOM 5 O5' U A2004 202.220 -2.033 219.881 1.00 51.30 O
ATOM 6 C5' U A2004 201.604 -2.393 221.101 1.00 50.95 C
ATOM 7 C4' U A2004 200.126 -2.462 220.954 1.00 50.65 C
ATOM 8 O4' U A2004 199.662 -1.290 220.258 1.00 50.60 O
ATOM 9 C3' U A2004 199.588 -3.633 220.133 1.00 50.79 C
ATOM 10 O3' U A2004 199.456 -4.809 220.923 1.00 50.70 O
ATOM 11 C2' U A2004 198.250 -3.109 219.609 1.00 50.56 C
ATOM 12 O2' U A2004 197.219 -3.344 220.559 1.00 50.17 O
ATOM 13 C1' U A2004 198.481 -1.598 219.540 1.00 50.52 C
ATOM 14 N1 U A2004 198.591 -1.078 218.144 1.00 50.79 N
ATOM 15 C2 U A2004 197.451 -1.013 217.415 1.00 50.70 C
ATOM 16 O2 U A2004 196.429 -1.398 217.881 1.00 50.42 O
ATOM 17 N3 U A2004 197.526 -0.509 216.162 1.00 50.96 N
ATOM 18 C4 U A2004 198.643 -0.034 215.522 1.00 51.31 C
ATOM 19 O4 U A2004 198.596 0.409 214.360 1.00 51.53 O
ATOM 20 C5 U A2004 199.817 -0.115 216.332 1.00 51.39 C
ATOM 21 C6 U A2004 199.762 -0.608 217.576 1.00 51.14 C
ATOM 22 P G A2005 199.971 -6.224 220.389 1.00 52.94 P
ATOM 23 OP1 G A2005 200.873 -5.947 219.250 1.00 53.35 O
ATOM 24 OP2 G A2005 198.784 -7.058 220.157 1.00 52.81 O
ATOM 25 O5' G A2005 200.779 -6.802 221.632 1.00 52.93 O
TER
ATOM 1 O3' A B2123 192.874 -2.979 221.475 1.00 44.72 O
ATOM 2 P A B2124 193.222 -3.864 220.191 1.00 46.93 P
ATOM 3 OP1 A B2124 192.657 -5.194 220.419 1.00 46.89 O
ATOM 4 OP2 A B2124 194.649 -3.735 219.917 1.00 47.25 O
ATOM 5 O5' A B2124 192.411 -3.124 219.059 1.00 46.95 O
ATOM 6 C5' A B2124 191.854 -3.833 217.968 1.00 47.13 C
ATOM 7 C4' A B2124 190.944 -2.952 217.187 1.00 47.06 C
ATOM 8 O4' A B2124 191.616 -1.715 216.914 1.00 47.15 O
ATOM 9 C3' A B2124 190.466 -3.516 215.866 1.00 47.31 C
ATOM 10 O3' A B2124 189.041 -3.415 215.786 1.00 47.07 O
ATOM 11 C2' A B2124 191.122 -2.634 214.804 1.00 47.59 C
ATOM 12 O2' A B2124 190.283 -2.350 213.711 1.00 47.67 O
ATOM 13 C1' A B2124 191.459 -1.362 215.563 1.00 47.39 C
ATOM 14 N9 A B2124 192.701 -0.711 215.110 1.00 47.68 N
ATOM 15 C8 A B2124 193.937 -0.959 215.580 1.00 47.83 C
ATOM 16 N7 A B2124 194.850 -0.240 215.023 1.00 48.08 N
ATOM 17 C5 A B2124 194.187 0.568 214.140 1.00 48.11 C
ATOM 18 C6 A B2124 194.629 1.552 213.243 1.00 48.35 C
ATOM 19 N6 A B2124 195.889 1.928 213.088 1.00 48.62 N
ATOM 20 N1 A B2124 193.697 2.173 212.495 1.00 48.31 N
ATOM 21 C2 A B2124 192.409 1.824 212.655 1.00 48.04 C
ATOM 22 N3 A B2124 191.898 0.915 213.464 1.00 47.81 N
ATOM 23 C4 A B2124 192.851 0.304 214.186 1.00 47.86 C
ATOM 24 P U B2125 188.136 -4.636 216.267 1.00 51.39 P
ATOM 25 OP1 U B2125 188.521 -5.798 215.503 1.00 51.73 O
ATOM 26 OP2 U B2125 186.770 -4.205 216.216 1.00 51.14 O
ATOM 27 O5' U B2125 188.588 -4.858 217.745 1.00 51.17 O
TER
Atoms:
C4: (198.643,-0.034,215.522)
N3: (197.526,-0.509,216.162)
OP1: (204.559,-2.467,220.644)
OP2: (204.125,-1.184,218.482)
C2: (197.451,-1.013,217.415)
C1': (198.481,-1.598,219.540)
C3': (199.588,-3.633,220.133)
O5': (202.220,-2.033,219.881)
O4': (199.662,-1.290,220.258)
C5': (201.604,-2.393,221.101)
P: (203.729,-1.539,219.858)
C4': (200.126,-2.462,220.954)
C2': (198.250,-3.109,219.609)
O2': (197.219,-3.344,220.559)
N1: (198.591,-1.078,218.144)
O4: (198.596,0.409,214.360)
O2: (196.429,-1.398,217.881)
C6: (199.762,-0.608,217.576)
C5: (199.817,-0.115,216.332)
O3': (199.456,-4.809,220.923)
N3: (197.526,-0.509,216.162)
OP1: (204.559,-2.467,220.644)
OP2: (204.125,-1.184,218.482)
C2: (197.451,-1.013,217.415)
C1': (198.481,-1.598,219.540)
C3': (199.588,-3.633,220.133)
O5': (202.220,-2.033,219.881)
O4': (199.662,-1.290,220.258)
C5': (201.604,-2.393,221.101)
P: (203.729,-1.539,219.858)
C4': (200.126,-2.462,220.954)
C2': (198.250,-3.109,219.609)
O2': (197.219,-3.344,220.559)
N1: (198.591,-1.078,218.144)
O4: (198.596,0.409,214.360)
O2: (196.429,-1.398,217.881)
C6: (199.762,-0.608,217.576)
C5: (199.817,-0.115,216.332)
O3': (199.456,-4.809,220.923)
OP1: (192.657,-5.194,220.419)
OP2: (194.649,-3.735,219.917)
C3': (190.466,-3.516,215.866)
C1': (191.459,-1.362,215.563)
C5': (191.854,-3.833,217.968)
O4': (191.616,-1.715,216.914)
C8: (193.937,-0.959,215.580)
O2': (190.283,-2.350,213.711)
C6: (194.629,1.552,213.243)
C5: (194.187,0.568,214.140)
C4: (192.851,0.304,214.186)
P: (193.222,-3.864,220.191)
C4': (190.944,-2.952,217.187)
C2': (191.122,-2.634,214.804)
C2: (192.409,1.824,212.655)
N1: (193.697,2.173,212.495)
N3: (191.898,0.915,213.464)
N6: (195.889,1.928,213.088)
N7: (194.850,-0.240,215.023)
N9: (192.701,-0.711,215.110)
O5': (192.411,-3.124,219.059)
O3': (189.041,-3.415,215.786)
OP2: (194.649,-3.735,219.917)
C3': (190.466,-3.516,215.866)
C1': (191.459,-1.362,215.563)
C5': (191.854,-3.833,217.968)
O4': (191.616,-1.715,216.914)
C8: (193.937,-0.959,215.580)
O2': (190.283,-2.350,213.711)
C6: (194.629,1.552,213.243)
C5: (194.187,0.568,214.140)
C4: (192.851,0.304,214.186)
P: (193.222,-3.864,220.191)
C4': (190.944,-2.952,217.187)
C2': (191.122,-2.634,214.804)
C2: (192.409,1.824,212.655)
N1: (193.697,2.173,212.495)
N3: (191.898,0.915,213.464)
N6: (195.889,1.928,213.088)
N7: (194.850,-0.240,215.023)
N9: (192.701,-0.711,215.110)
O5': (192.411,-3.124,219.059)
O3': (189.041,-3.415,215.786)
Image (generated by PyMOL):