ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:02062:02064

Extra

PDB:
ATOM 1 O3' U A2061 94.451 112.794 77.467 1.00 41.29 O
ATOM 2 P U A2062 95.447 112.329 76.281 1.00 42.84 P
ATOM 3 OP1 U A2062 96.787 112.899 76.606 1.00 39.01 O
ATOM 4 OP2 U A2062 94.826 112.617 74.960 1.00 39.68 O
ATOM 5 O5' U A2062 95.557 110.752 76.477 1.00 40.86 O
ATOM 6 C5' U A2062 96.025 110.207 77.723 1.00 41.40 C
ATOM 7 C4' U A2062 95.499 108.809 77.914 1.00 42.84 C
ATOM 8 O4' U A2062 94.048 108.833 77.999 1.00 42.21 O
ATOM 9 C3' U A2062 95.770 107.862 76.761 1.00 43.48 C
ATOM 10 O3' U A2062 97.085 107.344 76.800 1.00 45.20 O
ATOM 11 C2' U A2062 94.713 106.789 76.966 1.00 42.51 C
ATOM 12 O2' U A2062 95.096 105.851 77.952 1.00 41.35 O
ATOM 13 C1' U A2062 93.525 107.633 77.448 1.00 41.35 C
ATOM 14 N1 U A2062 92.550 107.969 76.396 1.00 39.20 N
ATOM 15 C2 U A2062 91.500 107.096 76.211 1.00 39.48 C
ATOM 16 O2 U A2062 91.366 106.082 76.865 1.00 41.18 O
ATOM 17 N3 U A2062 90.608 107.451 75.232 1.00 38.37 N
ATOM 18 C4 U A2062 90.654 108.563 74.431 1.00 38.25 C
ATOM 19 O4 U A2062 89.788 108.720 73.567 1.00 37.12 O
ATOM 20 C5 U A2062 91.773 109.424 74.673 1.00 38.11 C
ATOM 21 C6 U A2062 92.663 109.103 75.623 1.00 38.85 C
ATOM 22 P U A2063 97.705 106.678 75.482 1.00 47.60 P
ATOM 23 OP1 U A2063 99.170 106.600 75.680 1.00 50.51 O
ATOM 24 OP2 U A2063 97.165 107.379 74.294 1.00 45.93 O
ATOM 25 O5' U A2063 97.136 105.196 75.518 1.00 49.07 O
TER

ATOM 1 O3' U B2063 94.926 102.210 75.061 1.00 51.57 O
ATOM 2 P A B2064 93.650 103.139 75.338 1.00 48.91 P
ATOM 3 OP1 A B2064 93.639 104.205 74.306 1.00 46.88 O
ATOM 4 OP2 A B2064 93.658 103.505 76.783 1.00 47.08 O
ATOM 5 O5' A B2064 92.415 102.177 75.075 1.00 45.80 O
ATOM 6 C5' A B2064 92.136 101.065 75.946 1.00 42.08 C
ATOM 7 C4' A B2064 90.731 100.573 75.703 1.00 40.01 C
ATOM 8 O4' A B2064 89.790 101.587 76.143 1.00 39.92 O
ATOM 9 C3' A B2064 90.412 100.375 74.232 1.00 39.64 C
ATOM 10 O3' A B2064 90.853 99.110 73.761 1.00 37.18 O
ATOM 11 C2' A B2064 88.904 100.560 74.184 1.00 40.22 C
ATOM 12 O2' A B2064 88.209 99.400 74.591 1.00 43.52 O
ATOM 13 C1' A B2064 88.703 101.657 75.235 1.00 40.43 C
ATOM 14 N9 A B2064 88.595 103.035 74.733 1.00 40.56 N
ATOM 15 C8 A B2064 89.409 104.103 75.024 1.00 40.07 C
ATOM 16 N7 A B2064 89.026 105.228 74.471 1.00 39.73 N
ATOM 17 C5 A B2064 87.895 104.877 73.748 1.00 39.37 C
ATOM 18 C6 A B2064 87.019 105.625 72.941 1.00 39.64 C
ATOM 19 N6 A B2064 87.166 106.928 72.692 1.00 39.34 N
ATOM 20 N1 A B2064 85.974 104.979 72.386 1.00 40.16 N
ATOM 21 C2 A B2064 85.836 103.671 72.619 1.00 39.98 C
ATOM 22 N3 A B2064 86.597 102.858 73.345 1.00 38.97 N
ATOM 23 C4 A B2064 87.621 103.530 73.893 1.00 39.65 C
ATOM 24 P C B2065 91.300 98.952 72.232 1.00 40.17 P
ATOM 25 OP1 C B2065 91.830 97.580 72.044 1.00 40.77 O
ATOM 26 OP2 C B2065 92.144 100.108 71.852 1.00 40.78 O
ATOM 27 O5' C B2065 89.921 99.070 71.449 1.00 38.75 O
TER

Atoms:
C4: (90.654,108.563,74.431)
N3: (90.608,107.451,75.232)
OP1: (96.787,112.899,76.606)
OP2: (94.826,112.617,74.960)
C2: (91.500,107.096,76.211)
C1': (93.525,107.633,77.448)
C3': (95.770,107.862,76.761)
O5': (95.557,110.752,76.477)
O4': (94.048,108.833,77.999)
C5': (96.025,110.207,77.723)
P: (95.447,112.329,76.281)
C4': (95.499,108.809,77.914)
C2': (94.713,106.789,76.966)
O2': (95.096,105.851,77.952)
N1: (92.550,107.969,76.396)
O4: (89.788,108.720,73.567)
O2: (91.366,106.082,76.865)
C6: (92.663,109.103,75.623)
C5: (91.773,109.424,74.673)
O3': (97.085,107.344,76.800)
OP1: (93.639,104.205,74.306)
OP2: (93.658,103.505,76.783)
C3': (90.412,100.375,74.232)
C1': (88.703,101.657,75.235)
C5': (92.136,101.065,75.946)
O4': (89.790,101.587,76.143)
C8: (89.409,104.103,75.024)
O2': (88.209,99.400,74.591)
C6: (87.019,105.625,72.941)
C5: (87.895,104.877,73.748)
C4: (87.621,103.530,73.893)
P: (93.650,103.139,75.338)
C4': (90.731,100.573,75.703)
C2': (88.904,100.560,74.184)
C2: (85.836,103.671,72.619)
N1: (85.974,104.979,72.386)
N3: (86.597,102.858,73.345)
N6: (87.166,106.928,72.692)
N7: (89.026,105.228,74.471)
N9: (88.595,103.035,74.733)
O5': (92.415,102.177,75.075)
O3': (90.853,99.110,73.761)
Image (generated by PyMOL):
PyMOL image
show in jmol