ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3FU2:C5:C26

Extra

PDB:
ATOM 1 O3' G A 4 1.089 -32.485 -35.225 1.00 45.00 O
ATOM 2 P U A 5 1.619 -33.883 -35.808 1.00 44.70 P
ATOM 3 OP1 U A 5 3.038 -33.997 -35.421 1.00 44.63 O
ATOM 4 OP2 U A 5 1.238 -33.948 -37.240 1.00 45.18 O
ATOM 5 O5' U A 5 0.766 -34.976 -35.025 1.00 44.68 O
ATOM 6 C5' U A 5 0.760 -35.029 -33.600 1.00 44.47 C
ATOM 7 C4' U A 5 -0.301 -35.987 -33.124 1.00 46.10 C
ATOM 8 O4' U A 5 -1.615 -35.400 -33.306 1.00 46.59 O
ATOM 9 C3' U A 5 -0.360 -37.295 -33.894 1.00 48.17 C
ATOM 10 O3' U A 5 0.596 -38.229 -33.399 1.00 49.49 O
ATOM 11 C2' U A 5 -1.796 -37.745 -33.658 1.00 48.07 C
ATOM 12 O2' U A 5 -1.960 -38.392 -32.417 1.00 50.00 O
ATOM 13 C1' U A 5 -2.543 -36.408 -33.663 1.00 46.97 C
ATOM 14 N1 U A 5 -3.072 -36.079 -34.990 1.00 48.08 N
ATOM 15 C2 U A 5 -4.288 -36.615 -35.347 1.00 49.46 C
ATOM 16 O2 U A 5 -4.937 -37.323 -34.602 1.00 50.61 O
ATOM 17 N3 U A 5 -4.716 -36.292 -36.614 1.00 49.93 N
ATOM 18 C4 U A 5 -4.056 -35.498 -37.539 1.00 49.96 C
ATOM 19 O4 U A 5 -4.564 -35.296 -38.646 1.00 48.71 O
ATOM 20 C5 U A 5 -2.803 -34.973 -37.082 1.00 49.61 C
ATOM 21 C6 U A 5 -2.369 -35.273 -35.853 1.00 49.13 C
ATOM 22 P U A 6 1.248 -39.309 -34.396 1.00 52.41 P
ATOM 23 OP1 U A 6 2.352 -40.006 -33.677 1.00 49.95 O
ATOM 24 OP2 U A 6 1.541 -38.629 -35.687 1.00 53.13 O
ATOM 25 O5' U A 6 0.060 -40.344 -34.628 1.00 51.46 O
TER

ATOM 1 O3' A B 25 -8.836 -38.352 -30.857 1.00 64.28 O
ATOM 2 P A B 26 -8.202 -39.633 -31.595 1.00 66.98 P
ATOM 3 OP1 A B 26 -8.428 -40.806 -30.715 1.00 66.89 O
ATOM 4 OP2 A B 26 -6.823 -39.293 -32.029 1.00 67.19 O
ATOM 5 O5' A B 26 -9.100 -39.805 -32.896 1.00 65.60 O
ATOM 6 C5' A B 26 -10.505 -39.928 -32.774 1.00 65.27 C
ATOM 7 C4' A B 26 -11.113 -40.362 -34.079 1.00 66.43 C
ATOM 8 O4' A B 26 -10.947 -39.291 -35.047 1.00 66.24 O
ATOM 9 C3' A B 26 -10.384 -41.571 -34.664 1.00 67.46 C
ATOM 10 O3' A B 26 -11.195 -42.737 -34.870 1.00 68.58 O
ATOM 11 C2' A B 26 -9.414 -41.027 -35.717 1.00 66.49 C
ATOM 12 O2' A B 26 -9.366 -41.754 -36.923 1.00 67.64 O
ATOM 13 C1' A B 26 -10.067 -39.697 -36.072 1.00 65.24 C
ATOM 14 N9 A B 26 -9.203 -38.593 -36.475 1.00 62.94 N
ATOM 15 C8 A B 26 -8.008 -38.162 -35.964 1.00 62.18 C
ATOM 16 N7 A B 26 -7.485 -37.159 -36.630 1.00 61.17 N
ATOM 17 C5 A B 26 -8.409 -36.910 -37.638 1.00 60.70 C
ATOM 18 C6 A B 26 -8.448 -35.972 -38.686 1.00 60.19 C
ATOM 19 N6 A B 26 -7.495 -35.065 -38.909 1.00 61.26 N
ATOM 20 N1 A B 26 -9.517 -35.995 -39.510 1.00 59.15 N
ATOM 21 C2 A B 26 -10.473 -36.895 -39.289 1.00 59.05 C
ATOM 22 N3 A B 26 -10.549 -37.825 -38.347 1.00 60.72 N
ATOM 23 C4 A B 26 -9.473 -37.778 -37.545 1.00 61.34 C
ATOM 24 P A B 27 -10.698 -43.919 -35.846 1.00 69.68 P
ATOM 25 OP1 A B 27 -11.460 -45.132 -35.455 1.00 70.15 O
ATOM 26 OP2 A B 27 -9.206 -43.951 -35.839 1.00 68.67 O
ATOM 27 O5' A B 27 -11.217 -43.470 -37.288 1.00 67.04 O
TER

Atoms:
C4: (-4.056,-35.498,-37.539)
N3: (-4.716,-36.292,-36.614)
OP1: (3.038,-33.997,-35.421)
OP2: (1.238,-33.948,-37.240)
C2: (-4.288,-36.615,-35.347)
C1': (-2.543,-36.408,-33.663)
C3': (-0.360,-37.295,-33.894)
O5': (0.766,-34.976,-35.025)
O4': (-1.615,-35.400,-33.306)
C5': (0.760,-35.029,-33.600)
P: (1.619,-33.883,-35.808)
C4': (-0.301,-35.987,-33.124)
C2': (-1.796,-37.745,-33.658)
O2': (-1.960,-38.392,-32.417)
N1: (-3.072,-36.079,-34.990)
O4: (-4.564,-35.296,-38.646)
O2: (-4.937,-37.323,-34.602)
C6: (-2.369,-35.273,-35.853)
C5: (-2.803,-34.973,-37.082)
O3': (0.596,-38.229,-33.399)
OP1: (-8.428,-40.806,-30.715)
OP2: (-6.823,-39.293,-32.029)
C3': (-10.384,-41.571,-34.664)
C1': (-10.067,-39.697,-36.072)
C5': (-10.505,-39.928,-32.774)
O4': (-10.947,-39.291,-35.047)
C8: (-8.008,-38.162,-35.964)
O2': (-9.366,-41.754,-36.923)
C6: (-8.448,-35.972,-38.686)
C5: (-8.409,-36.910,-37.638)
C4: (-9.473,-37.778,-37.545)
P: (-8.202,-39.633,-31.595)
C4': (-11.113,-40.362,-34.079)
C2': (-9.414,-41.027,-35.717)
C2: (-10.473,-36.895,-39.289)
N1: (-9.517,-35.995,-39.510)
N3: (-10.549,-37.825,-38.347)
N6: (-7.495,-35.065,-38.909)
N7: (-7.485,-37.159,-36.630)
N9: (-9.203,-38.593,-36.475)
O5': (-9.100,-39.805,-32.896)
O3': (-11.195,-42.737,-34.870)
Image (generated by PyMOL):
PyMOL image
show in jmol