Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1D:A3:A4
Extra
PDB:
ATOM 1 P G A 3 26.091 9.619 3.516 0.65 20.98 P
ATOM 2 OP1 G A 3 26.869 9.919 2.302 0.65 21.32 O
ATOM 3 OP2 G A 3 26.234 8.293 4.178 0.65 19.73 O
ATOM 4 O5' G A 3 26.403 10.726 4.624 0.65 19.44 O
ATOM 5 C5' G A 3 26.434 12.107 4.315 0.65 20.40 C
ATOM 6 C4' G A 3 26.836 12.870 5.563 0.65 19.98 C
ATOM 7 O4' G A 3 25.819 12.708 6.588 0.65 21.70 O
ATOM 8 C3' G A 3 28.112 12.388 6.243 0.65 22.22 C
ATOM 9 O3' G A 3 29.291 12.852 5.555 0.65 23.40 O
ATOM 10 C2' G A 3 27.897 13.050 7.600 0.65 21.98 C
ATOM 11 O2' G A 3 28.028 14.458 7.573 0.65 21.72 O
ATOM 12 C1' G A 3 26.436 12.716 7.864 0.65 21.84 C
ATOM 13 N9 G A 3 26.249 11.434 8.548 0.65 18.91 N
ATOM 14 C8 G A 3 25.868 10.229 8.010 0.65 20.41 C
ATOM 15 N7 G A 3 25.805 9.267 8.886 0.65 17.78 N
ATOM 16 C5 G A 3 26.173 9.856 10.097 0.65 16.16 C
ATOM 17 C6 G A 3 26.284 9.302 11.404 0.65 14.58 C
ATOM 18 O6 G A 3 26.081 8.140 11.796 0.65 14.58 O
ATOM 19 N1 G A 3 26.691 10.266 12.328 0.65 13.08 N
ATOM 20 C2 G A 3 26.948 11.580 12.021 0.65 15.32 C
ATOM 21 N2 G A 3 27.331 12.359 13.044 0.65 16.66 N
ATOM 22 N3 G A 3 26.840 12.111 10.807 0.65 16.77 N
ATOM 23 C4 G A 3 26.447 11.194 9.893 0.65 18.75 C
ATOM 24 P C A 4 30.678 12.048 5.556 1.00 23.25 P
ATOM 25 OP1 C A 4 31.598 12.790 4.664 1.00 28.07 O
ATOM 26 OP2 C A 4 30.466 10.596 5.367 1.00 28.26 O
ATOM 27 O5' C A 4 31.125 12.255 7.088 1.00 20.87 O
TER
ATOM 1 O3' G B 3 29.291 12.852 5.555 0.65 23.40 O
ATOM 2 P C B 4 30.678 12.048 5.556 1.00 23.25 P
ATOM 3 OP1 C B 4 31.598 12.790 4.664 1.00 28.07 O
ATOM 4 OP2 C B 4 30.466 10.596 5.367 1.00 28.26 O
ATOM 5 O5' C B 4 31.125 12.255 7.088 1.00 20.87 O
ATOM 6 C5' C B 4 31.336 13.548 7.609 1.00 18.87 C
ATOM 7 C4' C B 4 31.680 13.415 9.083 1.00 20.23 C
ATOM 8 O4' C B 4 30.538 12.857 9.756 1.00 20.53 O
ATOM 9 C3' C B 4 32.753 12.403 9.395 1.00 20.16 C
ATOM 10 O3' C B 4 34.021 12.958 9.118 1.00 21.78 O
ATOM 11 C2' C B 4 32.494 12.228 10.888 1.00 18.75 C
ATOM 12 O2' C B 4 32.915 13.337 11.660 1.00 24.50 O
ATOM 13 C1' C B 4 30.976 12.146 10.898 1.00 20.42 C
ATOM 14 N1 C B 4 30.490 10.757 10.779 1.00 17.13 N
ATOM 15 C2 C B 4 30.428 10.010 11.955 1.00 17.18 C
ATOM 16 O2 C B 4 30.758 10.560 12.999 1.00 15.85 O
ATOM 17 N3 C B 4 29.995 8.733 11.905 1.00 14.42 N
ATOM 18 C4 C B 4 29.655 8.208 10.729 1.00 18.43 C
ATOM 19 N4 C B 4 29.247 6.940 10.738 1.00 18.37 N
ATOM 20 C5 C B 4 29.718 8.952 9.512 1.00 18.02 C
ATOM 21 C6 C B 4 30.149 10.211 9.579 1.00 19.75 C
ATOM 22 P G B 5 35.346 12.097 9.212 1.00 23.12 P
ATOM 23 OP1 G B 5 36.414 12.878 8.524 1.00 27.60 O
ATOM 24 OP2 G B 5 35.116 10.712 8.784 1.00 24.30 O
ATOM 25 O5' G B 5 35.588 12.133 10.787 1.00 22.04 O
TER
ATOM 2 OP1 G A 3 26.869 9.919 2.302 0.65 21.32 O
ATOM 3 OP2 G A 3 26.234 8.293 4.178 0.65 19.73 O
ATOM 4 O5' G A 3 26.403 10.726 4.624 0.65 19.44 O
ATOM 5 C5' G A 3 26.434 12.107 4.315 0.65 20.40 C
ATOM 6 C4' G A 3 26.836 12.870 5.563 0.65 19.98 C
ATOM 7 O4' G A 3 25.819 12.708 6.588 0.65 21.70 O
ATOM 8 C3' G A 3 28.112 12.388 6.243 0.65 22.22 C
ATOM 9 O3' G A 3 29.291 12.852 5.555 0.65 23.40 O
ATOM 10 C2' G A 3 27.897 13.050 7.600 0.65 21.98 C
ATOM 11 O2' G A 3 28.028 14.458 7.573 0.65 21.72 O
ATOM 12 C1' G A 3 26.436 12.716 7.864 0.65 21.84 C
ATOM 13 N9 G A 3 26.249 11.434 8.548 0.65 18.91 N
ATOM 14 C8 G A 3 25.868 10.229 8.010 0.65 20.41 C
ATOM 15 N7 G A 3 25.805 9.267 8.886 0.65 17.78 N
ATOM 16 C5 G A 3 26.173 9.856 10.097 0.65 16.16 C
ATOM 17 C6 G A 3 26.284 9.302 11.404 0.65 14.58 C
ATOM 18 O6 G A 3 26.081 8.140 11.796 0.65 14.58 O
ATOM 19 N1 G A 3 26.691 10.266 12.328 0.65 13.08 N
ATOM 20 C2 G A 3 26.948 11.580 12.021 0.65 15.32 C
ATOM 21 N2 G A 3 27.331 12.359 13.044 0.65 16.66 N
ATOM 22 N3 G A 3 26.840 12.111 10.807 0.65 16.77 N
ATOM 23 C4 G A 3 26.447 11.194 9.893 0.65 18.75 C
ATOM 24 P C A 4 30.678 12.048 5.556 1.00 23.25 P
ATOM 25 OP1 C A 4 31.598 12.790 4.664 1.00 28.07 O
ATOM 26 OP2 C A 4 30.466 10.596 5.367 1.00 28.26 O
ATOM 27 O5' C A 4 31.125 12.255 7.088 1.00 20.87 O
TER
ATOM 1 O3' G B 3 29.291 12.852 5.555 0.65 23.40 O
ATOM 2 P C B 4 30.678 12.048 5.556 1.00 23.25 P
ATOM 3 OP1 C B 4 31.598 12.790 4.664 1.00 28.07 O
ATOM 4 OP2 C B 4 30.466 10.596 5.367 1.00 28.26 O
ATOM 5 O5' C B 4 31.125 12.255 7.088 1.00 20.87 O
ATOM 6 C5' C B 4 31.336 13.548 7.609 1.00 18.87 C
ATOM 7 C4' C B 4 31.680 13.415 9.083 1.00 20.23 C
ATOM 8 O4' C B 4 30.538 12.857 9.756 1.00 20.53 O
ATOM 9 C3' C B 4 32.753 12.403 9.395 1.00 20.16 C
ATOM 10 O3' C B 4 34.021 12.958 9.118 1.00 21.78 O
ATOM 11 C2' C B 4 32.494 12.228 10.888 1.00 18.75 C
ATOM 12 O2' C B 4 32.915 13.337 11.660 1.00 24.50 O
ATOM 13 C1' C B 4 30.976 12.146 10.898 1.00 20.42 C
ATOM 14 N1 C B 4 30.490 10.757 10.779 1.00 17.13 N
ATOM 15 C2 C B 4 30.428 10.010 11.955 1.00 17.18 C
ATOM 16 O2 C B 4 30.758 10.560 12.999 1.00 15.85 O
ATOM 17 N3 C B 4 29.995 8.733 11.905 1.00 14.42 N
ATOM 18 C4 C B 4 29.655 8.208 10.729 1.00 18.43 C
ATOM 19 N4 C B 4 29.247 6.940 10.738 1.00 18.37 N
ATOM 20 C5 C B 4 29.718 8.952 9.512 1.00 18.02 C
ATOM 21 C6 C B 4 30.149 10.211 9.579 1.00 19.75 C
ATOM 22 P G B 5 35.346 12.097 9.212 1.00 23.12 P
ATOM 23 OP1 G B 5 36.414 12.878 8.524 1.00 27.60 O
ATOM 24 OP2 G B 5 35.116 10.712 8.784 1.00 24.30 O
ATOM 25 O5' G B 5 35.588 12.133 10.787 1.00 22.04 O
TER
Atoms:
OP1: (26.869,9.919,2.302)
OP2: (26.234,8.293,4.178)
C3': (28.112,12.388,6.243)
C1': (26.436,12.716,7.864)
C5': (26.434,12.107,4.315)
O6: (26.081,8.140,11.796)
O4': (25.819,12.708,6.588)
C8: (25.868,10.229,8.010)
C2: (26.948,11.580,12.021)
C6: (26.284,9.302,11.404)
C5: (26.173,9.856,10.097)
C4: (26.447,11.194,9.893)
P: (26.091,9.619,3.516)
C4': (26.836,12.870,5.563)
C2': (27.897,13.050,7.600)
O2': (28.028,14.458,7.573)
N1: (26.691,10.266,12.328)
N2: (27.331,12.359,13.044)
N3: (26.840,12.111,10.807)
N7: (25.805,9.267,8.886)
N9: (26.249,11.434,8.548)
O5': (26.403,10.726,4.624)
O3': (29.291,12.852,5.555)
OP2: (26.234,8.293,4.178)
C3': (28.112,12.388,6.243)
C1': (26.436,12.716,7.864)
C5': (26.434,12.107,4.315)
O6: (26.081,8.140,11.796)
O4': (25.819,12.708,6.588)
C8: (25.868,10.229,8.010)
C2: (26.948,11.580,12.021)
C6: (26.284,9.302,11.404)
C5: (26.173,9.856,10.097)
C4: (26.447,11.194,9.893)
P: (26.091,9.619,3.516)
C4': (26.836,12.870,5.563)
C2': (27.897,13.050,7.600)
O2': (28.028,14.458,7.573)
N1: (26.691,10.266,12.328)
N2: (27.331,12.359,13.044)
N3: (26.840,12.111,10.807)
N7: (25.805,9.267,8.886)
N9: (26.249,11.434,8.548)
O5': (26.403,10.726,4.624)
O3': (29.291,12.852,5.555)
C2: (30.428,10.010,11.955)
OP1: (31.598,12.790,4.664)
OP2: (30.466,10.596,5.367)
C4: (29.655,8.208,10.729)
O5': (31.125,12.255,7.088)
C3': (32.753,12.403,9.395)
C1': (30.976,12.146,10.898)
O4': (30.538,12.857,9.756)
C5': (31.336,13.548,7.609)
P: (30.678,12.048,5.556)
O2: (30.758,10.560,12.999)
C4': (31.680,13.415,9.083)
C2': (32.494,12.228,10.888)
O2': (32.915,13.337,11.660)
N1: (30.490,10.757,10.779)
N3: (29.995,8.733,11.905)
N4: (29.247,6.940,10.738)
C6: (30.149,10.211,9.579)
C5: (29.718,8.952,9.512)
O3': (34.021,12.958,9.118)
OP1: (31.598,12.790,4.664)
OP2: (30.466,10.596,5.367)
C4: (29.655,8.208,10.729)
O5': (31.125,12.255,7.088)
C3': (32.753,12.403,9.395)
C1': (30.976,12.146,10.898)
O4': (30.538,12.857,9.756)
C5': (31.336,13.548,7.609)
P: (30.678,12.048,5.556)
O2: (30.758,10.560,12.999)
C4': (31.680,13.415,9.083)
C2': (32.494,12.228,10.888)
O2': (32.915,13.337,11.660)
N1: (30.490,10.757,10.779)
N3: (29.995,8.733,11.905)
N4: (29.247,6.940,10.738)
C6: (30.149,10.211,9.579)
C5: (29.718,8.952,9.512)
O3': (34.021,12.958,9.118)
Image (generated by PyMOL):