ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3P22:E10:F7

Extra

PDB:
ATOM 1 O3' U A 9 12.815 -7.910 15.068 1.00 61.37 O
ATOM 2 P U A 10 12.659 -9.116 16.106 1.00 63.08 P
ATOM 3 OP1 U A 10 12.849 -8.540 17.461 1.00 66.06 O
ATOM 4 OP2 U A 10 13.472 -10.272 15.697 1.00 59.83 O
ATOM 5 O5' U A 10 11.132 -9.534 15.888 1.00 63.09 O
ATOM 6 C5' U A 10 10.106 -8.653 16.280 1.00 65.74 C
ATOM 7 C4' U A 10 8.934 -8.728 15.325 1.00 65.83 C
ATOM 8 O4' U A 10 9.382 -8.671 13.949 1.00 63.65 O
ATOM 9 C3' U A 10 8.120 -10.012 15.378 1.00 66.11 C
ATOM 10 O3' U A 10 7.205 -9.989 16.460 1.00 69.00 O
ATOM 11 C2' U A 10 7.369 -9.932 14.060 1.00 65.19 C
ATOM 12 O2' U A 10 6.230 -9.094 14.180 1.00 67.48 O
ATOM 13 C1' U A 10 8.452 -9.364 13.120 1.00 62.83 C
ATOM 14 N1 U A 10 9.135 -10.475 12.334 1.00 59.73 N
ATOM 15 C2 U A 10 8.549 -10.970 11.180 1.00 58.83 C
ATOM 16 O2 U A 10 7.511 -10.544 10.718 1.00 61.37 O
ATOM 17 N3 U A 10 9.226 -11.995 10.564 1.00 56.64 N
ATOM 18 C4 U A 10 10.414 -12.577 10.980 1.00 55.66 C
ATOM 19 O4 U A 10 10.910 -13.496 10.340 1.00 53.06 O
ATOM 20 C5 U A 10 10.965 -12.020 12.188 1.00 56.59 C
ATOM 21 C6 U A 10 10.318 -11.020 12.802 1.00 58.38 C
ATOM 22 P U A 11 7.015 -11.311 17.350 1.00 70.61 P
ATOM 23 OP1 U A 11 6.411 -10.895 18.640 1.00 75.29 O
ATOM 24 OP2 U A 11 8.276 -12.089 17.354 1.00 67.61 O
ATOM 25 O5' U A 11 5.945 -12.152 16.533 1.00 67.96 O
TER

ATOM 1 O3' A B 6 3.652 -8.423 9.980 1.00 69.90 O
ATOM 2 P A B 7 3.025 -9.571 10.892 1.00 71.19 P
ATOM 3 OP1 A B 7 1.603 -9.221 11.132 1.00 72.71 O
ATOM 4 OP2 A B 7 3.944 -9.795 12.034 1.00 70.00 O
ATOM 5 O5' A B 7 3.127 -10.860 9.939 1.00 68.43 O
ATOM 6 C5' A B 7 2.067 -11.139 9.040 1.00 68.78 C
ATOM 7 C4' A B 7 2.318 -12.431 8.295 1.00 66.21 C
ATOM 8 O4' A B 7 3.654 -12.401 7.751 1.00 63.46 O
ATOM 9 C3' A B 7 2.332 -13.686 9.145 1.00 64.62 C
ATOM 10 O3' A B 7 1.010 -14.119 9.446 1.00 65.24 O
ATOM 11 C2' A B 7 3.073 -14.644 8.213 1.00 63.46 C
ATOM 12 O2' A B 7 2.218 -15.237 7.259 1.00 66.45 O
ATOM 13 C1' A B 7 4.063 -13.731 7.490 1.00 61.23 C
ATOM 14 N9 A B 7 5.454 -13.941 7.896 1.00 56.75 N
ATOM 15 C8 A B 7 6.209 -13.165 8.734 1.00 55.37 C
ATOM 16 N7 A B 7 7.431 -13.611 8.908 1.00 53.23 N
ATOM 17 C5 A B 7 7.479 -14.768 8.139 1.00 52.39 C
ATOM 18 C6 A B 7 8.497 -15.720 7.889 1.00 50.99 C
ATOM 19 N6 A B 7 9.717 -15.642 8.438 1.00 48.06 N
ATOM 20 N1 A B 7 8.218 -16.763 7.064 1.00 51.43 N
ATOM 21 C2 A B 7 6.997 -16.854 6.519 1.00 53.17 C
ATOM 22 N3 A B 7 5.960 -16.020 6.677 1.00 55.76 N
ATOM 23 C4 A B 7 6.267 -14.987 7.507 1.00 54.82 C
ATOM 24 P A B 8 0.758 -15.404 10.374 1.00 66.09 P
ATOM 25 OP1 A B 8 -0.669 -15.473 10.772 1.00 67.56 O
ATOM 26 OP2 A B 8 1.792 -15.458 11.420 1.00 65.21 O
ATOM 27 O5' A B 8 1.076 -16.602 9.382 1.00 65.57 O
TER

Atoms:
C4: (10.414,-12.577,10.980)
N3: (9.226,-11.995,10.564)
OP1: (12.849,-8.540,17.461)
OP2: (13.472,-10.272,15.697)
C2: (8.549,-10.970,11.180)
C1': (8.452,-9.364,13.120)
C3': (8.120,-10.012,15.378)
O5': (11.132,-9.534,15.888)
O4': (9.382,-8.671,13.949)
C5': (10.106,-8.653,16.280)
P: (12.659,-9.116,16.106)
C4': (8.934,-8.728,15.325)
C2': (7.369,-9.932,14.060)
O2': (6.230,-9.094,14.180)
N1: (9.135,-10.475,12.334)
O4: (10.910,-13.496,10.340)
O2: (7.511,-10.544,10.718)
C6: (10.318,-11.020,12.802)
C5: (10.965,-12.020,12.188)
O3': (7.205,-9.989,16.460)
OP1: (1.603,-9.221,11.132)
OP2: (3.944,-9.795,12.034)
C3': (2.332,-13.686,9.145)
C1': (4.063,-13.731,7.490)
C5': (2.067,-11.139,9.040)
O4': (3.654,-12.401,7.751)
C8: (6.209,-13.165,8.734)
O2': (2.218,-15.237,7.259)
C6: (8.497,-15.720,7.889)
C5: (7.479,-14.768,8.139)
C4: (6.267,-14.987,7.507)
P: (3.025,-9.571,10.892)
C4': (2.318,-12.431,8.295)
C2': (3.073,-14.644,8.213)
C2: (6.997,-16.854,6.519)
N1: (8.218,-16.763,7.064)
N3: (5.960,-16.020,6.677)
N6: (9.717,-15.642,8.438)
N7: (7.431,-13.611,8.908)
N9: (5.454,-13.941,7.896)
O5': (3.127,-10.860,9.939)
O3': (1.010,-14.119,9.446)
Image (generated by PyMOL):
PyMOL image
show in jmol