ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3P22:A9:B6

Extra

PDB:
ATOM 1 O3' U A 8 15.611 5.706 16.261 1.00 52.61 O
ATOM 2 P U A 9 16.227 6.744 15.233 1.00 54.81 P
ATOM 3 OP1 U A 9 17.696 6.552 15.232 1.00 56.33 O
ATOM 4 OP2 U A 9 15.622 8.069 15.465 1.00 53.25 O
ATOM 5 O5' U A 9 15.653 6.230 13.841 1.00 54.29 O
ATOM 6 C5' U A 9 16.029 4.946 13.367 1.00 55.94 C
ATOM 7 C4' U A 9 15.036 4.487 12.325 1.00 56.59 C
ATOM 8 O4' U A 9 13.682 4.638 12.817 1.00 55.41 O
ATOM 9 C3' U A 9 15.003 5.328 11.059 1.00 56.89 C
ATOM 10 O3' U A 9 16.139 5.055 10.251 1.00 58.89 O
ATOM 11 C2' U A 9 13.722 4.800 10.451 1.00 55.26 C
ATOM 12 O2' U A 9 13.919 3.504 9.904 1.00 56.84 O
ATOM 13 C1' U A 9 12.827 4.737 11.694 1.00 54.00 C
ATOM 14 N1 U A 9 11.936 5.919 11.862 1.00 52.26 N
ATOM 15 C2 U A 9 10.806 6.017 11.076 1.00 52.17 C
ATOM 16 O2 U A 9 10.490 5.185 10.252 1.00 54.27 O
ATOM 17 N3 U A 9 10.046 7.135 11.283 1.00 51.46 N
ATOM 18 C4 U A 9 10.294 8.150 12.188 1.00 51.57 C
ATOM 19 O4 U A 9 9.503 9.086 12.262 1.00 52.03 O
ATOM 20 C5 U A 9 11.495 7.989 12.976 1.00 50.73 C
ATOM 21 C6 U A 9 12.249 6.897 12.790 1.00 51.68 C
ATOM 22 P U A 10 17.063 6.259 9.739 1.00 60.76 P
ATOM 23 OP1 U A 10 18.411 5.699 9.457 1.00 62.82 O
ATOM 24 OP2 U A 10 16.959 7.407 10.652 1.00 58.14 O
ATOM 25 O5' U A 10 16.299 6.647 8.382 1.00 60.11 O
TER

ATOM 1 O3' A B 5 10.687 1.278 8.423 1.00 56.49 O
ATOM 2 P A B 6 11.097 2.126 7.119 1.00 57.97 P
ATOM 3 OP1 A B 6 11.497 1.136 6.091 1.00 59.60 O
ATOM 4 OP2 A B 6 12.029 3.190 7.538 1.00 56.48 O
ATOM 5 O5' A B 6 9.746 2.827 6.650 1.00 56.76 O
ATOM 6 C5' A B 6 9.709 3.625 5.506 1.00 59.08 C
ATOM 7 C4' A B 6 8.296 4.107 5.253 1.00 60.63 C
ATOM 8 O4' A B 6 7.580 4.283 6.507 1.00 60.76 O
ATOM 9 C3' A B 6 8.244 5.472 4.610 1.00 61.39 C
ATOM 10 O3' A B 6 8.339 5.320 3.212 1.00 64.78 O
ATOM 11 C2' A B 6 6.866 5.958 5.025 1.00 60.59 C
ATOM 12 O2' A B 6 5.868 5.408 4.198 1.00 62.40 O
ATOM 13 C1' A B 6 6.739 5.415 6.446 1.00 59.43 C
ATOM 14 N9 A B 6 7.096 6.359 7.522 1.00 57.55 N
ATOM 15 C8 A B 6 8.086 6.212 8.457 1.00 55.80 C
ATOM 16 N7 A B 6 8.176 7.213 9.308 1.00 54.68 N
ATOM 17 C5 A B 6 7.166 8.080 8.916 1.00 54.95 C
ATOM 18 C6 A B 6 6.728 9.327 9.418 1.00 54.61 C
ATOM 19 N6 A B 6 7.288 9.939 10.473 1.00 53.51 N
ATOM 20 N1 A B 6 5.690 9.930 8.798 1.00 55.21 N
ATOM 21 C2 A B 6 5.121 9.321 7.748 1.00 57.04 C
ATOM 22 N3 A B 6 5.442 8.157 7.189 1.00 57.68 N
ATOM 23 C4 A B 6 6.485 7.574 7.821 1.00 56.69 C
ATOM 24 P A B 7 9.023 6.450 2.317 1.00 65.84 P
ATOM 25 OP1 A B 7 8.784 6.095 0.900 1.00 67.02 O
ATOM 26 OP2 A B 7 10.404 6.661 2.809 1.00 64.92 O
ATOM 27 O5' A B 7 8.154 7.746 2.682 1.00 63.89 O
TER

Atoms:
C4: (10.294,8.150,12.188)
N3: (10.046,7.135,11.283)
OP1: (17.696,6.552,15.232)
OP2: (15.622,8.069,15.465)
C2: (10.806,6.017,11.076)
C1': (12.827,4.737,11.694)
C3': (15.003,5.328,11.059)
O5': (15.653,6.230,13.841)
O4': (13.682,4.638,12.817)
C5': (16.029,4.946,13.367)
P: (16.227,6.744,15.233)
C4': (15.036,4.487,12.325)
C2': (13.722,4.800,10.451)
O2': (13.919,3.504,9.904)
N1: (11.936,5.919,11.862)
O4: (9.503,9.086,12.262)
O2: (10.490,5.185,10.252)
C6: (12.249,6.897,12.790)
C5: (11.495,7.989,12.976)
O3': (16.139,5.055,10.251)
OP1: (11.497,1.136,6.091)
OP2: (12.029,3.190,7.538)
C3': (8.244,5.472,4.610)
C1': (6.739,5.415,6.446)
C5': (9.709,3.625,5.506)
O4': (7.580,4.283,6.507)
C8: (8.086,6.212,8.457)
O2': (5.868,5.408,4.198)
C6: (6.728,9.327,9.418)
C5: (7.166,8.080,8.916)
C4: (6.485,7.574,7.821)
P: (11.097,2.126,7.119)
C4': (8.296,4.107,5.253)
C2': (6.866,5.958,5.025)
C2: (5.121,9.321,7.748)
N1: (5.690,9.930,8.798)
N3: (5.442,8.157,7.189)
N6: (7.288,9.939,10.473)
N7: (8.176,7.213,9.308)
N9: (7.096,6.359,7.522)
O5': (9.746,2.827,6.650)
O3': (8.339,5.320,3.212)
Image (generated by PyMOL):
PyMOL image
show in jmol