ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0105:035

Extra

PDB:
ATOM 1 O3' A A 104 79.432 148.191 34.052 1.00 34.05 O
ATOM 2 P U A 105 81.037 148.313 34.098 1.00 35.20 P
ATOM 3 OP1 U A 105 81.647 147.047 34.582 1.00 34.16 O
ATOM 4 OP2 U A 105 81.359 149.584 34.780 1.00 36.41 O
ATOM 5 O5' U A 105 81.388 148.477 32.556 1.00 38.41 O
ATOM 6 C5' U A 105 82.741 148.485 32.068 1.00 39.31 C
ATOM 7 C4' U A 105 82.735 148.335 30.562 1.00 40.70 C
ATOM 8 O4' U A 105 82.565 146.939 30.196 1.00 40.90 O
ATOM 9 C3' U A 105 81.608 149.088 29.864 1.00 42.30 C
ATOM 10 O3' U A 105 82.019 149.499 28.570 1.00 46.56 O
ATOM 11 C2' U A 105 80.533 148.019 29.733 1.00 42.09 C
ATOM 12 O2' U A 105 79.612 148.288 28.693 1.00 43.14 O
ATOM 13 C1' U A 105 81.378 146.779 29.440 1.00 41.53 C
ATOM 14 N1 U A 105 80.725 145.532 29.868 1.00 43.33 N
ATOM 15 C2 U A 105 79.784 144.956 29.022 1.00 44.43 C
ATOM 16 O2 U A 105 79.506 145.404 27.918 1.00 46.47 O
ATOM 17 N3 U A 105 79.176 143.830 29.519 1.00 44.43 N
ATOM 18 C4 U A 105 79.409 143.224 30.737 1.00 44.39 C
ATOM 19 O4 U A 105 78.705 142.276 31.083 1.00 42.63 O
ATOM 20 C5 U A 105 80.416 143.856 31.533 1.00 45.36 C
ATOM 21 C6 U A 105 81.023 144.958 31.085 1.00 43.78 C
ATOM 22 P G A 106 82.149 151.061 28.237 1.00 47.39 P
ATOM 23 OP1 G A 106 81.140 151.841 29.010 1.00 47.61 O
ATOM 24 OP2 G A 106 82.164 151.146 26.754 1.00 48.95 O
ATOM 25 O5' G A 106 83.589 151.436 28.799 1.00 43.92 O
TER

ATOM 1 O3' G B 34 69.371 142.555 24.841 1.00 39.36 O
ATOM 2 P A B 35 70.060 142.487 23.384 1.00 39.17 P
ATOM 3 OP1 A B 35 69.009 142.801 22.392 1.00 38.80 O
ATOM 4 OP2 A B 35 70.846 141.234 23.238 1.00 38.09 O
ATOM 5 O5' A B 35 71.122 143.673 23.435 1.00 40.18 O
ATOM 6 C5' A B 35 72.070 143.753 24.509 1.00 39.58 C
ATOM 7 C4' A B 35 73.197 144.685 24.146 1.00 41.19 C
ATOM 8 O4' A B 35 74.088 144.808 25.285 1.00 41.82 O
ATOM 9 C3' A B 35 74.072 144.240 22.982 1.00 41.42 C
ATOM 10 O3' A B 35 74.599 145.410 22.367 1.00 45.42 O
ATOM 11 C2' A B 35 75.187 143.474 23.686 1.00 40.55 C
ATOM 12 O2' A B 35 76.398 143.426 22.957 1.00 39.90 O
ATOM 13 C1' A B 35 75.367 144.309 24.951 1.00 40.66 C
ATOM 14 N9 A B 35 75.878 143.575 26.110 1.00 42.09 N
ATOM 15 C8 A B 35 76.930 143.950 26.900 1.00 43.26 C
ATOM 16 N7 A B 35 77.149 143.145 27.906 1.00 45.21 N
ATOM 17 C5 A B 35 76.181 142.163 27.767 1.00 44.42 C
ATOM 18 C6 A B 35 75.871 141.028 28.535 1.00 44.63 C
ATOM 19 N6 A B 35 76.520 140.695 29.657 1.00 42.36 N
ATOM 20 N1 A B 35 74.853 140.245 28.117 1.00 44.43 N
ATOM 21 C2 A B 35 74.190 140.596 27.012 1.00 43.60 C
ATOM 22 N3 A B 35 74.377 141.645 26.216 1.00 45.48 N
ATOM 23 C4 A B 35 75.401 142.402 26.654 1.00 43.99 C
ATOM 24 P U B 36 74.368 145.674 20.801 1.00 44.03 P
ATOM 25 OP1 U B 36 74.393 144.369 20.097 1.00 44.48 O
ATOM 26 OP2 U B 36 75.332 146.731 20.426 1.00 43.98 O
ATOM 27 O5' U B 36 72.891 146.256 20.701 1.00 43.72 O
TER

Atoms:
C4: (79.409,143.224,30.737)
N3: (79.176,143.830,29.519)
OP1: (81.647,147.047,34.582)
OP2: (81.359,149.584,34.780)
C2: (79.784,144.956,29.022)
C1': (81.378,146.779,29.440)
C3': (81.608,149.088,29.864)
O5': (81.388,148.477,32.556)
O4': (82.565,146.939,30.196)
C5': (82.741,148.485,32.068)
P: (81.037,148.313,34.098)
C4': (82.735,148.335,30.562)
C2': (80.533,148.019,29.733)
O2': (79.612,148.288,28.693)
N1: (80.725,145.532,29.868)
O4: (78.705,142.276,31.083)
O2: (79.506,145.404,27.918)
C6: (81.023,144.958,31.085)
C5: (80.416,143.856,31.533)
O3': (82.019,149.499,28.570)
OP1: (69.009,142.801,22.392)
OP2: (70.846,141.234,23.238)
C3': (74.072,144.240,22.982)
C1': (75.367,144.309,24.951)
C5': (72.070,143.753,24.509)
O4': (74.088,144.808,25.285)
C8: (76.930,143.950,26.900)
O2': (76.398,143.426,22.957)
C6: (75.871,141.028,28.535)
C5: (76.181,142.163,27.767)
C4: (75.401,142.402,26.654)
P: (70.060,142.487,23.384)
C4': (73.197,144.685,24.146)
C2': (75.187,143.474,23.686)
C2: (74.190,140.596,27.012)
N1: (74.853,140.245,28.117)
N3: (74.377,141.645,26.216)
N6: (76.520,140.695,29.657)
N7: (77.149,143.145,27.906)
N9: (75.878,143.575,26.110)
O5': (71.122,143.673,23.435)
O3': (74.599,145.410,22.367)
Image (generated by PyMOL):
PyMOL image
show in jmol